Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptopilina_20clavipes_20[genbank_20GCA_5F001855655.1_202016-10-28] 36,600 sequences; 255,343,917 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq32227 260 8e-65 seq32664 96.9 2e-15 >seq32227 Length=215958 Score = 260 bits (288), Expect = 8e-65 Identities = 472/676 (70%), Gaps = 31/676 (5%) Strand=Plus/Plus Query 3486 GTGACGCCAGGGCAAGATCCAACCCATTCGAATTAGTGGGCAAAGCtttttttATCAACA 3545 ||||||| | || | || || |||| |||| | | ||| || ||||| || || Sbjct 163509 GTGACGCTCGTACACGCTCGAATCCATACGAAACAATTCGCAGTGCATTTTTCATAAATC 163568 Query 3546 GAGGTGCTGTAAAAATGGCAAACATTGATCATGCAACGAATTTCGTATTTAC---ACGAT 3602 ||| || || ||||||||||| |||||| | || |||||| | || || || | Sbjct 163569 GAGCGGCCGTGAAAATGGCAAATATTGATAAAGCGTGTAATTTCATGTTCACCAAACCAG 163628 Query 3603 TGAATGATGGATCAA-ATGAATTGATATATTTTGCTGACGTATGCGCTGGTCCAGGTGGT 3661 || | | ||| ||||||| | ||||| || || || |||||||| || |||||| Sbjct 163629 AACATT-TAAAGCAAGATGAATTACTCTATTTCGCCGATGTTTGCGCTGGACCTGGTGGT 163687 Query 3662 TTCAGTGAATATATGTTATGGAGAAAGAAATGGAATATCAAAGG-TTATGGTATGACGTT 3720 |||||||||||| | |||| ||||||||||||| | |||||| || |||| | || || Sbjct 163688 TTCAGTGAATATGTTTTATTTCGAAAGAAATGGAA-AGCAAAGGGTTTTGGTTTTACATT 163746 Query 3721 ACGCGaaaaaa----aTGATTTTCAACTGAACAGATTTTACGATAACTTTTCG----GAA 3772 ||||||| |||| ||| || | || |||||| | | || || ||| Sbjct 163747 ----GAAAAAAGAGAATGACTTTAAAATTGAC-GATTTTTC---AGCTGGTCCTAGTGAA 163798 Query 3773 ACTTTACACCCGTATTATGGTCCGCTTAACGATGGTAATATCTACAATTCAC--AAAATC 3830 ||||| || || |||||||| || | | |||||| || | | | ||| | |||||| Sbjct 163799 ACTTTTCATCCATATTATGGACCCAATGATGATGGTGATGTTTTC--TTCCCGGAAAATC 163856 Query 3831 AGAAAGGTTTTTGTGAAATGATTATGAAAGATACCGAAGGAAAAGGTGTACATTTTATGA 3890 || | | || || |||| |||| | | || ||||||| ||||| |||||||||| Sbjct 163857 AGGATGCGTTGAAAAAATTGATAATGAGACAAACAAAAGGAAAGGGTGTGCATTTTATGA 163916 Query 3891 TGGCTGACGGTGGGTTCTCGGTTGAGGGTCAAGAAAATATGCAAGAAATGTTATCGAAAA 3950 || | || ||||| || || || || ||||| |||||||| ||||| || || || || Sbjct 163917 TGTCGGATGGTGGATTTTCAGTGGAAGGTCAGGAAAATATACAAGAGATATTGTCCAAGC 163976 Query 3951 AGATGTATTTGTGTCAATGTTTAATTGCATTGATGATCATACGAATTGGTGGTCATTGTG 4010 | |||| | ||||| ||||| ||||| |||||||| | || ||| || |||| || Sbjct 163977 AATTGTACCTTTGTCAGTGTTTGATTGCGTTGATGATTGTCCGCGATGGAGGGCATTTTG 164036 Query 4011 TTATCAAATTTTTCGATATATTTACACCTTTTAGTGCTGGTTTAGTGTATTTGATGTATA 4070 | | ||| |||| || || ||||| || ||||| ||||| | |||| | | |||||| Sbjct 164037 TAACGAAACTTTTTGACATTTTTACGCCATTTAGCGCTGGACTCGTGTTTCTCATGTATC 164096 Query 4071 GATCTTTTAATCGTATTTGT--ATTTTCAAACCACATTCATCGCGACCGGCCAATTCTGA 4128 | | ||| | || | ||| |||||||| ||| || ||||| | || || ||||| || Sbjct 164097 GTTGTTTCGA-CG-AGGTGTCAATTTTCAAGCCAAATACATCGAGGCCCGCGAATTCGGA 164154 Query 4129 AAGATATTTGGTGTGT 4144 | | |||||| | ||| Sbjct 164155 ACGCTATTTGATTTGT 164170 >seq32664 Length=109251 Score = 96.9 bits (106), Expect = 2e-15 Identities = 428/665 (64%), Gaps = 16/665 (2%) Strand=Plus/Plus Query 5418 TGGGCGGATAGTGGGTGGTAATCCGACATCTATAGACGATGTACCCTATCAAGTATCTTT 5477 ||| || ||||| ||||| ||||| ||| | || || || || |||||||| || || | Sbjct 99397 TGGACGCATAGTTGGTGGAAATCCAACAACAATTGAAGAAGTTCCCTATCAGGTTTCACT 99456 Query 5478 GCAAGTTTTTTCCACACATATATGTGGAGGTAGCATTATTTCAGAAAAATGGATTGTAAC 5537 |||| | | | | | ||||| ||||| |||||||| ||||| ||||| |||| Sbjct 99457 ACAAGCCTATGGCTTTAGTTTCTGTGGTGGTAGTATTATTTCCGAAAATTGGATCCTAAC 99516 Query 5538 TGCTGCACATTGTATAACGTATCC-AGTATCGTTGTATAAAATTC-GTACTGGCTCTACG 5595 |||| |||||||| || |||||| ||| | || || || || | ||||| ||| Sbjct 99517 AGCTGGACATTGTACAAAGTATCCCAGT--CAATGGATTAATGTCCGAACTGGTAGTACT 99574 Query 5596 T-TATCAACATGCGGCGGTGTTGTGAGTGATGTTGAATCAATCATTGTTCATCACAAATA 5654 | |||||| || ||| | | | |||||| ||||||| ||| | | Sbjct 99575 AATTTCAACACA-GGTGGTACTTTACATCCAGTTGAAAAAATCATTCAACATGAGGGTTT 99633 Query 5655 CGCAACAAATAATTATGGAGTGCCCGTGAATGACATAGCTCTTTTGCAATTAAAGAATTC 5714 ||||| || |||||| | |||| |||||| | || || | ||||| || | | Sbjct 99634 TAAGACAAACAAATATGGAATTCCCGAGAATGATGTGGCACTGATTCAATTGAAAACACC 99693 Query 5715 ATTAATATTAGGCATAACGTCTGACGCAGTTGGTTTATACGATTACGGTGAGAGTATTCC 5774 ||| | ||| | || || | || || | | |||| | |||||| | | Sbjct 99694 ATTGAAATTGGACAACACACGAAAGCCAATTCCACTTTTCGATCAGGGTGAGGATGCTGT 99753 Query 5775 AAGCGAATCTTTTGGCTTGGTTACGGGATGGGGAACT-TTGACCGAGAACGGAAACACAC 5833 | || ||| | || |||||||| || || | | || | | ||| ||| Sbjct 99754 TGAGGGTTCACTTGCAACAATCACTGGATGGGGCACCGTTAAACAAGGAGGCAAA-ACAT 99812 Query 5834 CTGTTGTTTTGTATTCCGTTTCTATTCCAATTATACCGACAGACGTATGTGCAAACATTT 5893 ||| ||||| | || ||||||| || | ||| | || ||| || | | Sbjct 99813 CTGAAGTTTTACGAACAGTGGATATTCCAGTTGTTTCGAAAACAGTCTGT-CATGAAGCT 99871 Query 5894 TCCAATC-ATGGGGTGGTTTGCCAGAAAACCAGATATGTGCGGCTGCTCCAGGAGGTGGT 5952 | ||| | || ||||| | ||| | || || ||||| ||| ||| |||||| Sbjct 99872 TACAAGCGATTTGGTGGACTTCCACAGGGACAAATTTGTGCCGCTTATCCTCAAGGTGGA 99931 Query 5953 AAAGACGCATGCCAAGGTGATTCGGGTGGCCC---GTTAGTTGTCGATAACCGCTTAGCT 6009 |||||||| ||||| || ||||| ||||| || | || ||| | ||| | | ||| Sbjct 99932 AAAGACGCTTGCCAGGGAGATTCCGGTGGTCCAATGATAATTGGTGGTAAACTC---GCT 99988 Query 6010 GGTATCGTGTCATGGGGTAATGGATGTGGTCGTACAGGATGGCCCGGAGCTTACACTGAA 6069 ||||| || || |||||||||||||||| || | ||||| || || | ||| || ||| Sbjct 99989 GGTATTGTTTCCTGGGGTAATGGATGTGCTCTGAAAGGATATCCAGGTGTTTATACGGAA 100048 Query 6070 ATCGC 6074 |||| Sbjct 100049 GTCGC 100053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276430239809800