Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptopilina_20clavipes_20[genbank_20GCA_5F001855655.1_202016-10-28] 36,600 sequences; 255,343,917 total letters Query= NC_006657.1 Length=19820 Score E Sequences producing significant alignments: (Bits) Value seq26779 174 2e-39 seq23383 172 7e-39 seq27394 150 2e-32 seq20662 116 5e-22 seq7969 111 2e-20 seq4649 111 2e-20 seq35025 100 4e-17 >seq26779 Length=9691 Score = 174 bits (192), Expect = 2e-39 Identities = 117/131 (89%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 14636 GAGCGCGGACAATCTTAAAGTTAATATTAAGAGCTAAAATTTTCAGGCAAtttttttttA 14695 ||| |||||| |||||||||||||||| ||||||| ||||||||||| |||||||||||| Sbjct 9115 GAGTGCGGACTATCTTAAAGTTAATATAAAGAGCTCAAATTTTCAGGGAATTTTTTTTTA 9056 Query 14696 TTCATTTGGAAGCATTTCAGCCCCAGGGAGCAAAGAAATTCGGAAACATCCATATTAAGG 14755 | |||||||||||||| |||| | ||||||||||||||||| ||||| || |||||||| Sbjct 9055 TCAATTTGGAAGCATTTGAGCCTCTGGGAGCAAAGAAATTCGAAAACAACCTTATTAAGG 8996 Query 14756 ACCACCCTAAT 14766 ||| ||||||| Sbjct 8995 ACCTCCCTAAT 8985 Score = 170 bits (188), Expect = 2e-38 Identities = 115/129 (89%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 11239 TAGGGTGGTCCTTAATATGGATGTTTCCGAATTTCTTTGCTCCCTGGGGCTGAAATGCTT 11298 ||||| ||||||||||| || ||||| ||||||||||||||||| | |||| |||||||| Sbjct 8987 TAGGGAGGTCCTTAATAAGGTTGTTTTCGAATTTCTTTGCTCCCAGAGGCTCAAATGCTT 9046 Query 11299 CCAAATGAATaaaaaaaaaTTGCCTGAAAATTTTAGCTCTTAATATTAACTTTAAGATTG 11358 |||||| ||||||||||||| ||||||||||| ||||||| |||||||||||||||| | Sbjct 9047 CCAAATTGATAAAAAAAAATTCCCTGAAAATTTGAGCTCTTTATATTAACTTTAAGATAG 9106 Query 11359 TCCGCGCTC 11367 ||||| ||| Sbjct 9107 TCCGCACTC 9115 >seq23383 Length=10739 Score = 172 bits (190), Expect = 7e-39 Identities = 133/157 (85%), Gaps = 1/157 (1%) Strand=Plus/Minus Query 14610 GTTATTTCTATGAGAAACTTAGATCAGAGCGCGGACAATCTTAAAGTTAATATTAAGAGC 14669 |||||||| || | ||| ||| | ||| ||||||||| |||||||||||||||||||| Sbjct 5813 GTTATTTCGATTAAAAATTTAAGTTGGAGTGCGGACAATATTAAAGTTAATATTAAGAGC 5754 Query 14670 TAAAATTTTCAGGCAAtttttttttATTCATTTGGAAGCATTTCAGCCCCAGGGAGCAAA 14729 | ||||||| ||| ||| |||||| || |||||||||||| | |||||| ||||||||| Sbjct 5753 TCAAATTTTTAGGGAATATTTTTT-ATCAATTTGGAAGCATATGAGCCCCTGGGAGCAAA 5695 Query 14730 GAAATTCGGAAACATCCATATTAAGGACCACCCTAAT 14766 ||||||| ||||| || ||||||||||||||||||| Sbjct 5694 GAAATTCAAAAACAACCTTATTAAGGACCACCCTAAT 5658 Score = 168 bits (186), Expect = 8e-38 Identities = 131/155 (85%), Gaps = 1/155 (1%) Strand=Plus/Plus Query 11239 TAGGGTGGTCCTTAATATGGATGTTTCCGAATTTCTTTGCTCCCTGGGGCTGAAATGCTT 11298 ||||||||||||||||| || ||||| |||||||||||||||| |||||| | |||||| Sbjct 5660 TAGGGTGGTCCTTAATAAGGTTGTTTTTGAATTTCTTTGCTCCCAGGGGCTCATATGCTT 5719 Query 11299 CCAAATGAATaaaaaaaaaTTGCCTGAAAATTTTAGCTCTTAATATTAACTTTAAGATTG 11358 |||||| || |||||| ||| ||| ||||||| ||||||||||||||||||||| |||| Sbjct 5720 CCAAATTGAT-AAAAAATATTCCCTAAAAATTTGAGCTCTTAATATTAACTTTAATATTG 5778 Query 11359 TCCGCGCTCTGATCTAAGTTTCTCATAGAAATAAC 11393 ||||| ||| | ||| ||| | || |||||||| Sbjct 5779 TCCGCACTCCAACTTAAATTTTTAATCGAAATAAC 5813 >seq27394 Length=12160 Score = 150 bits (166), Expect = 2e-32 Identities = 247/360 (69%), Gaps = 56/360 (16%) Strand=Plus/Minus Query 11239 TAGGGTGGTCCTTAATATGGATGTTTCCGAATTTCTTTGCTCCCTGGGGCTGAAATGCTT 11298 ||||||||||||||||| || | ||| |||||| ||||||||| | |||| |||||||| Sbjct 558 TAGGGTGGTCCTTAATAAGGTTCTTTTTGAATTTATTTGCTCCCAGTGGCTCAAATGCTT 499 Query 11299 CCAAATGAATaaaaaaaaaTTGCCTGAAAATTTTAGCTCTTAATATTAACTTTAAGATTG 11358 |||||| ||| |||||||| ||| ||||||| ||| || ||||||||||||| Sbjct 498 CCAAAT---TAATAAAAAATTACCTTAAAATTTGAGCGCT-----TTAACTTTAAGATAT 447 Query 11359 TCCGCGCTCTGATCTAAGTTTCTCATAGAAATAACATGGAAAAAATTTTATTTGTGCTTT 11418 ||||| ||| | || |||| ||||| ||| Sbjct 446 TCCGCACTCAAACTTACGTTT------------------------TTTTA----TGC--- 418 Query 11419 AGAATTCCATAACTCTGCCATGAATAAATCAAAAGTTATCAATTGTATCATATTTATTGT 11478 || ||||||| || | ||| |||||||||| || ||| ||||||| | || Sbjct 417 --AA----ATAACTCAGCAACAAATGAATCAAAAGTAATAAATCACGACATATTTTTAGT 364 Query 11479 AAATTCAACGCTCTACAAAAAAGTTATCTTATGATTTTTCGCTAAATGTATTGGCTTAAG 11538 ||||| ||||||||| | |||| || ||||| |||||| |||||| ||||| |||| Sbjct 363 AAATTTAACGCTCTATATCAAAGATACCTTATAATTTTTTGCTAAACCTATTGACTTA-- 306 Query 11539 AGTTATTTGAGCTCAAAATTCAATTGATAGATAATTATTAATATTATCAAGTATAATTAT 11598 ||||| | || ||| | | | | |||||||||||||||||||||||||| Sbjct 305 --TTATT----ATTAATATT---ATCAAGGCTTTTTATTAATATTATCAAGTATAATTAT 255 Score = 145 bits (160), Expect = 1e-30 Identities = 209/300 (70%), Gaps = 45/300 (15%) Strand=Plus/Plus Query 14467 TAAGCCAATACATTTAGCGAAAAATCATAAGATAACTTTTTTGTAGAGCGTTGAATTTAC 14526 |||| ||||| |||||| |||||| ||||| || |||| | ||||||||| ||||||| Sbjct 306 TAAGTCAATAGGTTTAGCAAAAAATTATAAGGTATCTTTGATATAGAGCGTTAAATTTAC 365 Query 14527 AATAAATATGATACAATTGATAACTTTTGATTTATTTATGGCAGAGTTATGGAATTCTAA 14586 | ||||||| ||| || |||||||||| |||| | || ||||||| || Sbjct 366 TAAAAATATGTCGTGATTTATTACTTTTGATTCATTTGTTGCTGAGTTAT----TT---- 417 Query 14587 AGCACAAATAAAATTTTTTCCATGTTATTTCTATGAGAAACTTAGATCAGAGCGCGGACA 14646 ||| ||||| |||| || | ||| ||||| Sbjct 418 -GCA----TAAAA------------------------AAACGTAAGTTTGAGTGCGGAAT 448 Query 14647 ATCTTAAAGTTAATATTAAGAGCTAAAATTTTCAGGCAAtttttttttATTCATTTGGAA 14706 ||||||||||||| || ||| ||||||| ||| |||||||| ||| |||||||| Sbjct 449 ATCTTAAAGTTAA-----AGCGCTCAAATTTTAAGGTAATTTTTTATTA---ATTTGGAA 500 Query 14707 GCATTTCAGCCCCAGGGAGCAAAGAAATTCGGAAACATCCATATTAAGGACCACCCTAAT 14766 |||||| |||| | ||||||||| |||||| ||| | || ||||||||||||||||||| Sbjct 501 GCATTTGAGCCACTGGGAGCAAATAAATTCAAAAAGAACCTTATTAAGGACCACCCTAAT 560 >seq20662 Length=17663 Score = 116 bits (128), Expect = 5e-22 Identities = 97/118 (82%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 14610 GTTATTTCTATGAGAAACTTAGATCAGAGCGCGGACAATCTTAAAGTTAATATTAAGAGC 14669 |||||||| || | ||||||| || ||| |||||| |||||||||||||||||||||| Sbjct 3775 GTTATTTCCATAAAAAACTTAAATTGGAGTGCGGACTATCTTAAAGTTAATATTAAGAGT 3716 Query 14670 TAAAATTTTCAGGCAAtttttttttATTCATTTGGAAGCATTTCAGCCCCAGGGAGCA 14727 | |||||||||| || ||||||||| |||||||||||||| ||| | |||||| Sbjct 3715 TCAAATTTTCAGAGAA--TTTTTTTATCAATTTGGAAGCATTTGTGCCACTTGGAGCA 3660 Score = 116 bits (128), Expect = 5e-22 Identities = 97/118 (82%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 11276 TGCTCCCTGGGGCTGAAATGCTTCCAAATGAATaaaaaaaaaTTGCCTGAAAATTTTAGC 11335 |||||| | ||| |||||||||||||| ||||||||| || |||||||||| | | Sbjct 3660 TGCTCCAAGTGGCACAAATGCTTCCAAATTGATAAAAAAA--TTCTCTGAAAATTTGAAC 3717 Query 11336 TCTTAATATTAACTTTAAGATTGTCCGCGCTCTGATCTAAGTTTCTCATAGAAATAAC 11393 ||||||||||||||||||||| |||||| ||| || ||||||| | || |||||||| Sbjct 3718 TCTTAATATTAACTTTAAGATAGTCCGCACTCCAATTTAAGTTTTTTATGGAAATAAC 3775 >seq7969 Length=1144 Score = 111 bits (122), Expect = 2e-20 Identities = 87/103 (84%), Gaps = 1/103 (1%) Strand=Plus/Minus Query 14663 TAAGAGCTAAAATTTTCAGGCAAtttttttttATTCATTTGGAAGCATTTCAGCCCCAGG 14722 ||||||| ||||||| || |||||||||| || |||||||||||||| |||||| Sbjct 1044 TAAGAGCACAAATTTTTAGAGAATTTTTTTT-ATCAATTTGGAAGCATTTAAGCCCCTAA 986 Query 14723 GAGCAAAGAAATTCGGAAACATCCATATTAAGGACCACCCTAA 14765 ||||||||||||||| ||||| | |||||||||||||||||| Sbjct 985 GAGCAAAGAAATTCGAAAACAATCTTATTAAGGACCACCCTAA 943 Score = 109 bits (120), Expect = 7e-20 Identities = 86/102 (84%), Gaps = 1/102 (1%) Strand=Plus/Plus Query 11239 TAGGGTGGTCCTTAATATGGATGTTTCCGAATTTCTTTGCTCCCTGGGGCTGAAATGCTT 11298 ||||||||||||||||| | ||||| ||||||||||||||| |||||| |||||||| Sbjct 944 TAGGGTGGTCCTTAATAAGATTGTTTTCGAATTTCTTTGCTCTTAGGGGCTTAAATGCTT 1003 Query 11299 CCAAATGAATaaaaaaaaaTTGCCTGAAAATTTTAGCTCTTA 11340 |||||| || |||||||||| || ||||||| ||||||| Sbjct 1004 CCAAATTGAT-AAAAAAAATTCTCTAAAAATTTGTGCTCTTA 1044 >seq4649 Length=1173 Score = 111 bits (122), Expect = 2e-20 Identities = 87/103 (84%), Gaps = 1/103 (1%) Strand=Plus/Minus Query 14663 TAAGAGCTAAAATTTTCAGGCAAtttttttttATTCATTTGGAAGCATTTCAGCCCCAGG 14722 ||||||| ||||||| || |||||||||| || |||||||||||||| |||||| Sbjct 1067 TAAGAGCACAAATTTTTAGAGAATTTTTTTT-ATCAATTTGGAAGCATTTAAGCCCCTAA 1009 Query 14723 GAGCAAAGAAATTCGGAAACATCCATATTAAGGACCACCCTAA 14765 ||||||||||||||| ||||| | |||||||||||||||||| Sbjct 1008 GAGCAAAGAAATTCGAAAACAATCTTATTAAGGACCACCCTAA 966 Score = 109 bits (120), Expect = 7e-20 Identities = 86/102 (84%), Gaps = 1/102 (1%) Strand=Plus/Plus Query 11239 TAGGGTGGTCCTTAATATGGATGTTTCCGAATTTCTTTGCTCCCTGGGGCTGAAATGCTT 11298 ||||||||||||||||| | ||||| ||||||||||||||| |||||| |||||||| Sbjct 967 TAGGGTGGTCCTTAATAAGATTGTTTTCGAATTTCTTTGCTCTTAGGGGCTTAAATGCTT 1026 Query 11299 CCAAATGAATaaaaaaaaaTTGCCTGAAAATTTTAGCTCTTA 11340 |||||| || |||||||||| || ||||||| ||||||| Sbjct 1027 CCAAATTGAT-AAAAAAAATTCTCTAAAAATTTGTGCTCTTA 1067 >seq35025 Length=4242 Score = 100 bits (110), Expect = 4e-17 Identities = 81/97 (84%), Gaps = 1/97 (1%) Strand=Plus/Minus Query 14663 TAAGAGCTAAAATTTTCAGGCAAtttttttttATTCATTTGGAAGCATTTCAGCCCCAGG 14722 ||||||| ||||||| || |||||||||| || |||||||||||||| |||||| Sbjct 2253 TAAGAGCACAAATTTTTAGAGAATTTTTTTT-ATCAATTTGGAAGCATTTAAGCCCCTAA 2195 Query 14723 GAGCAAAGAAATTCGGAAACATCCATATTAAGGACCA 14759 ||||||||||||||| ||||| | |||||||||||| Sbjct 2194 GAGCAAAGAAATTCGAAAACAATCTTATTAAGGACCA 2158 Score = 100 bits (110), Expect = 4e-17 Identities = 81/97 (84%), Gaps = 1/97 (1%) Strand=Plus/Plus Query 11244 TGGTCCTTAATATGGATGTTTCCGAATTTCTTTGCTCCCTGGGGCTGAAATGCTTCCAAA 11303 |||||||||||| | ||||| ||||||||||||||| |||||| ||||||||||||| Sbjct 2158 TGGTCCTTAATAAGATTGTTTTCGAATTTCTTTGCTCTTAGGGGCTTAAATGCTTCCAAA 2217 Query 11304 TGAATaaaaaaaaaTTGCCTGAAAATTTTAGCTCTTA 11340 | || |||||||||| || ||||||| ||||||| Sbjct 2218 TTGAT-AAAAAAAATTCTCTAAAAATTTGTGCTCTTA 2253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 63278809861400