Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptopilina_20clavipes_20[genbank_20GCA_5F001855655.1_202016-10-28] 36,600 sequences; 255,343,917 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq33810 217 2e-51 seq29084 102 1e-16 seq17032 98.7 1e-15 >seq33810 Length=88678 Score = 217 bits (240), Expect = 2e-51 Identities = 388/561 (69%), Gaps = 14/561 (2%) Strand=Plus/Minus Query 62592 TACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAA 62651 ||||||| ||||| ||||| ||| || | |||||||| || || || || ||||| Sbjct 66806 TACCGATTGGTCTGTGTCTGAAATTGGATTTCTCAGCTTCGGGTATTGGGTAGAAATTAT 66747 Query 62652 TATCTATAATTTTATTGAGATTTCTG---ACAATTACTTTGACCACATCCTTCAG-TTTG 62707 | || |||||||||| | ||||| |||||| | | | | || ||||| |||| Sbjct 66746 TGTCAATAATTTTATCTAAGTTTCTAGTAACAATTTTTGTTATC---TCTTTCAGCTTTG 66690 Query 62708 AGAAAATCAAA-----TCGCCCATCTATT-ACAAACATGTTCAATGCAACAGATGCCAGA 62761 | ||| ||||| | | | ||| || |||||||| | |||| || |||| | Sbjct 66689 A-AAAGTCAAAAGTTTTAGTACTGGAATTGACGAACATGTTAACAGCAATTGAAGCCAAA 66631 Query 62762 TTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTA 62821 || |||||||| || |||| | | | |||||| || || |||||||| |||||||| Sbjct 66630 TTGCAAACGGCCACTTCATCTGGACTAGAATATTGAATAATTTCAGTGCAGAGATTACTG 66571 Query 62822 CACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGA 62881 || || || ||||| | |||||||||||| ||| | || || ||| || || || Sbjct 66570 CATTTTATAGTTCCAATATTTTGTTGATTTGATTTTCTATTGCAGTGATCTTTGTACAGC 66511 Query 62882 ATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCC 62941 ||| | || || || ||||||| || || | ||| || |||| | | | || || Sbjct 66510 ATGTAAGGGGTCCCGGTTTCAACTTGTGAAATCAAAATTGCAGTCCATAGGTCACGCGCT 66451 Query 62942 TTTATTATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCG 63001 || ||| | |||| || | ||| |||||||| |||||| | || || || Sbjct 66450 TTAATTTGACGTTTGAATTTGCCTTCCGTTTCGTATTTTGTATAGAGAACATCAAATTCT 66391 Query 63002 TCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCG 63061 ||||||||||||| | || || ||| |||| | |||||||| || | |||| |||| Sbjct 66390 TCTCCCCAAACATCAGCAAGACCTGGAGATTCGTGAGGACACATTAAGGTCCACATTCCG 66331 Query 63062 TCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTG 63121 || ||| | || ||||||||||| | ||| |||||||||||| | ||||| || || Sbjct 66330 TCGTCCATTACACGTTTCATAAATAAATCCGGAATCCAAAGACCATAAAATAATTCCCTC 66271 Query 63122 GTTCTATGTTCCTCGTTTCCT 63142 | | || |||||| |||||| Sbjct 66270 GCGCGATATTCCTCTTTTCCT 66250 Score = 143 bits (158), Expect = 3e-29 Identities = 195/272 (72%), Gaps = 0/272 (0%) Strand=Plus/Minus Query 62098 CTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCT 62157 ||||| || ||| | ||| ||||| ||| || || || || | ||| | ||||| Sbjct 67456 CTGAACTGAGCCATTGTTTGCTATAATTTCATTTTTCATATCTTCGTCCCACAGATTTCT 67397 Query 62158 CTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCT 62217 || |||||| || | | ||||| || ||||| | |||||||||||| || | || | Sbjct 67396 TTCAGTTAAATCTTTCAAAAGATGAGGGTTAACAATTTGAAATTCTCCCGAGAGAACGCG 67337 Query 62218 CCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGC 62277 | | ||||||||||| || |||||||| | || ||||| || ||||||||||| || Sbjct 67336 TCTTGAATAAATATTACTTGTGTACGGTTCAATTGATTCATTGTTGCCCAAAATTTGTGC 67277 Query 62278 AGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGAT 62337 |||||| || || ||||| || || | |||||| ||| | || || | ||| ||| Sbjct 67276 AGTTGAAGCTGTTGGCATTGGAGCTAACAATAACGAATTACGAACTCCATGAGTTGCGAT 67217 Query 62338 TTTATCTTTTAGAGGTTCCCAATTCCAAAGAT 62369 ||| | |||| || || ||||| |||||||| Sbjct 67216 TTTTGCCTTTAAAGCTTGCCAATCCCAAAGAT 67185 Score = 116 bits (128), Expect = 5e-21 Identities = 196/284 (69%), Gaps = 0/284 (0%) Strand=Plus/Minus Query 63140 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 63199 || ||||| || || | |||||| || | | ||| |||| |||||| ||||| | || Sbjct 66170 CCAGTATTTTTCTTTAAATCGAGAAATTCGAAAATGTCAGCATGCCATGGTTCAATATAA 66111 Query 63200 ATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 63259 || || | |||| || | ||||||||| || ||||| | ||||| |||||| ||||| Sbjct 66110 ATTGCAAATGCTCCCGGTCTTTTGTTTCCACCTTGATCAACGTATCGAGCGGTACTATTA 66051 Query 63260 TAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTT 63319 |||||||| | ||| |||| || |||||||||| || | || |||| ||| || Sbjct 66050 TAAACTCTAATCATAGGAACAAGACCATTGGATTCTCCTTGAGTTCCTGCGATGCGAGTT 65991 Query 63320 CCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 63379 || |||| | ||| | || | || ||||| || || |||| || | | Sbjct 65990 CCTTTGGCTCTGATACAATGAACGTTAACGCCAATTCCACCAGCGGATTTACTAATGAGT 65931 Query 63380 GCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATC 63423 || ||| |||||| || || || ||||| || ||||| || || Sbjct 65930 GCACATTTTTTTAATGTGTCGTATATGCCTTCAATACTGTCTTC 65887 >seq29084 Length=6691 Score = 102 bits (112), Expect = 1e-16 Identities = 155/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 32465 TTTTTTAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCAT 32524 |||| | ||||||| ||| || | ||| || || |||||||| || || ||| Sbjct 788 TTTTGGACATCCCAACTCAAGAAGTAGTCTGTCGGCAACAAATTCAATGTACTGGCACAT 729 Query 32525 CATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTC 32584 || || |||||||| || || | || || || | ||| |||| | ||| |||||||| Sbjct 728 CAATTTGCAATTCATGCCGATCATTTCCACAGGCAAAGCGTCAGTTAAAAACTCTTGTTC 669 Query 32585 AATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAA 32644 |||||| || |||||| | || || || | ||| ||||| | ||| | | | Sbjct 668 AATAGACACTGCGTCTTTAATTATTGAAATCACTCGTTCTTTAGATGGTTTTTGAACGAT 609 Query 32645 ATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCT 32685 ||||||||||||| ||| ||||| || |||||||| |||| Sbjct 608 GTGTTTAAACATCAGACACGCGAAGTCACAGTGTAGTCCCT 568 >seq17032 Length=5332 Score = 98.7 bits (108), Expect = 1e-15 Identities = 98/127 (77%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 33147 TTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 33206 || |||| ||| |||||||| || ||||||||||| |||||||| ||||||||||| | | Sbjct 870 TTGGATAAATCAACTTCTTCAACAGTCCAAAATGAAGCCTCTGCTTTTTTATACATCTGC 929 Query 33207 CAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTGGATTTTTTGCAAGGATT 33266 || || || | ||||||| ||||| | |||||||| | ||||||| | || | Sbjct 930 CAAATATCTGGCCATTGAATGGGAAATACAACAAATCGACGAGGATTTTCTTTGAGAAGA 989 Query 33267 GGTTCCA 33273 ||||||| Sbjct 990 GGTTCCA 996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633342113360000