Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptopilina_20clavipes_20[genbank_20GCA_5F001855655.1_202016-10-28] 36,600 sequences; 255,343,917 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq17032 136 4e-27 seq29084 131 2e-25 seq22018 122 1e-22 seq32283 118 1e-21 seq26028 96.9 4e-15 >seq17032 Length=5332 Score = 136 bits (150), Expect = 4e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421 ||||| || ||||| | |||||||||||||||||||| || || ||||| || | ||| Sbjct 422 ATGTAAGTGTCGATCAGTAGAGAATACATTTCAGAATGAACGTTTTCCATGGCCACTTGA 481 Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGA 93481 ||||| |||||||| | ||| || || | || |||||||| ||| | || || | | Sbjct 482 AATCCATAGAAACAACGAGCCTCTGTCACTTGAACTTCTTGGCTAAAGCGTTCCACCAAA 541 Query 93482 TTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGT 93541 ||||| || || ||||| |||||||| || ||||| || || ||||| ||||| | Sbjct 542 TTTTCGTTAACAATACCGTCGGATGCAGCGAAAAAGGCTAAAATATGTGAAATAAATTTG 601 Query 93542 TTCTCATCATCTTTAAGCTTATCCCAATCGGATAGATC 93579 ||||||||| | | || |||||| |||||||| Sbjct 602 CGCTCATCATCCGTCAATTTGCTCCAATCTGATAGATC 639 Score = 96.9 bits (106), Expect = 4e-15 Identities = 91/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 93581 TTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCC 93640 || || | ||| |||||||| ||||||||||| || || ||||||||||| ||||| | | Sbjct 870 TTGGATAAATCAACTTCTTCAACAGTCCAAAATGAAGCCTCTGCTTTTTTATACATCTGC 929 Query 93641 CATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAG 93696 || || ||| | ||||||| ||||||| ||||| ||| ||| || ||||| || Sbjct 930 CAAATATCTGGCCATTGAATGGGAAATACAACAAATCGACGAGGATTTTCTTTGAG 985 >seq29084 Length=6691 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 93116 TCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTG 93175 || |||| || || | || || || || || | ||| || | ||||||| ||||| Sbjct 443 TCATCTCTGGAAATGAGTTCGTTACTAAAAGTCAGACCAGGCATGAGTCCTCTCTTCTTT 384 Query 93176 AGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCC 93235 ||||| || ||||| |||||||| || || || || |||||||| || |||||||| Sbjct 383 AGCCAGAAAATTGATGCAAAACTGCCGCTGAAGAAGATTCCTTCCACCGCCGCAAATGCA 324 Query 93236 ACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCT 93295 | | |||||| |||||| |||| || | | || ||||| || | |||||| | ||| Sbjct 323 ATCACACGTTCAGCAAAAGTTGCAGATTCGTTACTTATCCAGTTAAGAGCCCATTGTGCT 264 Query 93296 TTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGGTAATC 93342 || || || |||||||| ||||||||||| || |||||| |||| Sbjct 263 TTCTTTGCAACGCAAGGTAGAGTTTCGATAGCATTGAATAGGAAATC 217 >seq22018 Length=29804 Score = 122 bits (134), Expect = 1e-22 Identities = 82/91 (90%), Gaps = 2/91 (2%) Strand=Plus/Plus Query 126269 AGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCGTGG 126326 |||||||||||| |||||||||||||||||||||| |||||||||| | |||||||||| Sbjct 28233 AGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGATAGGGAGCGTGG 28292 Query 126327 GTTCGAACCCCACACCTGACAAATTATTATT 126357 ||||||||||||||||| |||||| || || Sbjct 28293 GTTCGAACCCCACACCTAGCAAATTTTTTTT 28323 >seq32283 Length=186768 Score = 118 bits (130), Expect = 1e-21 Identities = 83/93 (89%), Gaps = 4/93 (4%) Strand=Plus/Minus Query 126255 TTCTATTT--ACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTC 126312 |||||||| | || |||||||||||| |||||||||||||||||||||| |||||||| Sbjct 16316 TTCTATTTTTAGAGCTAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTC 16257 Query 126313 CC--TCGGGAGCGTGGGTTCGAACCCCACACCT 126343 || | ||||||||||||||||||||||||||| Sbjct 16256 CCGATAGGGAGCGTGGGTTCGAACCCCACACCT 16224 >seq26028 Length=48414 Score = 96.9 bits (106), Expect = 4e-15 Identities = 73/86 (85%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 126269 AGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGGT 126328 |||||||||||| |||||||||||||||| ||||| |||||||| | |||||||||| Sbjct 27968 AGGTTGGCCGAGCGGTCTAAGGCGCCAGACTTAAGTTCTGGTTCAATATTGAGCGTGGGT 27909 Query 126329 TCGAACCCCACACCTGACAAATTATT 126354 ||||| ||||||||| ||| || || Sbjct 27908 TCGAATCCCACACCTAGCAATTTTTT 27883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556606036184000