Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptopilina_20clavipes_20[genbank_20GCA_5F001855655.1_202016-10-28] 36,600 sequences; 255,343,917 total letters Query= NC_008931.1 Length=4886 Score E Sequences producing significant alignments: (Bits) Value seq28850 78.8 3e-11 seq15560 78.8 3e-11 >seq28850 Length=12412 Score = 78.8 bits (86), Expect = 3e-11 Identities = 87/115 (76%), Gaps = 6/115 (5%) Strand=Plus/Minus Query 814 TTATTTGAATCAAATATCATTTCTTCAGAACAATTACGTTCTATTTCAATTAATTAACAT 873 ||||||||||||||||| |||| ||| | ||| || | ||||| ||| | || || Sbjct 1582 TTATTTGAATCAAATATAATTTATTCGAACCAAATATAATTTATTTGAATCA---AATAT 1526 Query 874 AGTTTATTTGAAACTAATATACTTTATTAAATTAAAATATAAGGATTTATTTAAA 928 | |||||||||| | |||||| |||||| | | ||||||| |||||||| || Sbjct 1525 AATTTATTTGAATCAAATATAATTTATTTGAATCAAATATA---ATTTATTTGAA 1474 >seq15560 Length=37697 Score = 78.8 bits (86), Expect = 3e-11 Identities = 87/115 (76%), Gaps = 6/115 (5%) Strand=Plus/Plus Query 814 TTATTTGAATCAAATATCATTTCTTCAGAACAATTACGTTCTATTTCAATTAATTAACAT 873 ||||||||||||||||| |||| || | ||| || | | ||||| ||| | || || Sbjct 19196 TTATTTGAATCAAATATAATTTATTTGAATCAAATATGATTTATTTGAATCA---AATAT 19252 Query 874 AGTTTATTTGAAACTAATATACTTTATTAAATTAAAATATAAGGATTTATTTAAA 928 | |||||||||| | |||||| |||||| | | ||||||| |||||||| || Sbjct 19253 AATTTATTTGAATCAAATATAATTTATTTGAATCAAATATA---ATTTATTTGAA 19304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15516985869000