Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptopilina_20clavipes_20[genbank_20GCA_5F001855655.1_202016-10-28] 36,600 sequences; 255,343,917 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq33810 161 1e-34 seq17032 131 2e-25 seq29084 95.1 1e-14 >seq33810 Length=88678 Score = 161 bits (178), Expect = 1e-34 Identities = 206/288 (72%), Gaps = 0/288 (0%) Strand=Plus/Minus Query 47246 gttttctataattttgttttttaattcatttgaccaaagttttcgttcagttaatgtttt 47305 |||| ||||||||| ||||| | || | ||| || |||| ||||||||| ||| Sbjct 67441 GTTTGCTATAATTTCATTTTTCATATCTTCGTCCCACAGATTTCTTTCAGTTAAATCTTT 67382 Query 47306 taaAAGATGAGGATTAACAATTTGAAATTCTCCAGATAGTACTCTACGGCTATATATATT 47365 ||||||||||| |||||||||||||||||||| || || || | | ||| ||||| Sbjct 67381 CAAAAGATGAGGGTTAACAATTTGAAATTCTCCCGAGAGAACGCGTCTTGAATAAATATT 67322 Query 47366 ACTTGTATATGGTTCTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGG 47425 |||||| || ||||| || |||||||| || || |||||||| |||||||| ||||| || Sbjct 67321 ACTTGTGTACGGTTCAATTGATTCATTGTTGCCCAAAATTTGTGCAGTTGAAGCTGTTGG 67262 Query 47426 CATGGATGCAACTAATAAGCTATTTCTTACTCCATATTTTTGTATCTNNNNNNNNNNNNG 47485 ||| | || | ||||| ||| | ||||||| || || | Sbjct 67261 CATTGGAGCTAACAATAACGAATTACGAACTCCATGAGTTGCGATTTTTGCCTTTAAAGC 67202 Query 47486 TTTCCAATCCCAAAGATCTGATGGAACAACATTCCAAAAATCATATTG 47533 || |||||||||||||| || ||| |||||||| | |||||||| Sbjct 67201 TTGCCAATCCCAAAGATTTGTTGGCGTTACATTCCACATGTCATATTG 67154 Score = 109 bits (120), Expect = 6e-19 Identities = 206/302 (68%), Gaps = 2/302 (1%) Strand=Plus/Minus Query 48279 TTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCC 48338 || |||| || || ||||| || | || ||||||||||||||||| | ||| ||||| Sbjct 66162 TTTCTTTAAA--TCGAGAAATTCGAAAATGTCAGCATGCCATGGTTCAATATAAATTGCA 66105 Query 48339 ATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACT 48398 | | | || |||| ||| || || |||||||| | |||| || ||| | ||||||||| Sbjct 66104 AATGCTCCCGGTCTTTTGTTTCCACCTTGATCAACGTATCGAGCGGTACTATTATAAACT 66045 Query 48399 CTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTA 48458 || | ||| || |||| |||||| ||| || | ||||| | || | |||| | Sbjct 66044 CTAATCATAGGAACAAGACCATTGGATTCTCCTTGAGTTCCTGCGATGCGAGTTCCTTTG 65985 Query 48459 GCTCTTATATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACAC 48518 ||||| ||| | || || || || ||||| || |||| || || ||||| Sbjct 65984 GCTCTGATACAATGAACGTTAACGCCAATTCCACCAGCGGATTTACTAATGAGTGCACAT 65925 Query 48519 CGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAA 48578 ||| | || || || || ||||| ||||| || || ||| | || || || ||| Sbjct 65924 TTTTTTAATGTGTCGTATATGCCTTCAATACTGTCTTCAGACATTGTCAAAAGGAAGCAA 65865 Query 48579 CT 48580 || Sbjct 65864 CT 65863 Score = 107 bits (118), Expect = 2e-18 Identities = 166/237 (70%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 48617 TGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGA 48676 |||||| || |||||| | || || || ||||| | ||||| || ||||| || Sbjct 65723 TGTTGGTGACGCATGAGTGAAATATCGTTCAGATAAATAATTATAGGTCTCAATGACTTT 65664 Query 48677 ATCTATATCCCATTGATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTC 48736 || | ||| |||| ||| ||| | || | ||||||||||| |||||| ||||| Sbjct 65663 GTCAACATCTTCACGATGAATAGCTACTGCAACTCTCATTAACATATGTTGAGGCCTTTC 65604 Query 48737 AACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATA 48796 ||||| ||| | |||||| | | ||| | |||||||||||| || |||||||| Sbjct 65603 AACAACTTTTCCGTCTATTTTAAGTAAATAACTTCGTTCCAATGTTTTGAATCCAAAATA 65544 Query 48797 GTTGTATGAAAAGTCGTTATCATTAATAATTGATGAATTTATTCTTTCCTTATGTTT 48853 || || ||| ||| ||||| || || | |||||||| |||||| |||||| Sbjct 65543 ATTATAACTAAAATCGCGATCATAGATTATGGCTGAATTTAATCTTTCTGCATGTTT 65487 Score = 86.0 bits (94), Expect = 7e-12 Identities = 124/172 (72%), Gaps = 6/172 (3%) Strand=Plus/Minus Query 47050 TCCATCCATAGAAATGCATACTAGTTAA--TTTAGAATAACTA-GGTTCTGAAATATGAA 47106 |||| || |||||||||||||||||||| ||| | | | || | | | ||||||| Sbjct 67721 TCCAACCGTAGAAATGCATACTAGTTAAAGTTTC---TGTCGATGGCTTTAACATATGAA 67665 Query 47107 TATTAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGCCATATCTAAAATAA 47166 ||| | ||| || |||||||||||| ||||||| ||| || ||||| | |||||| Sbjct 67664 CATTCAAAGACTGTGACTGATCAATAAAAGCACCTCGATCTGCAGCCATTTTTAAAATTG 67605 Query 47167 CCCTTTGTGGTATCTCCCATACTGTTTTATAAATTTGTTTAATGTCTTCTGG 47218 | ||| ||| ||||| || ||||| || | || ||| | || ||||| Sbjct 67604 TTTTCTGTTTTATTTCCCACACGGTTTTGTATAATTCTTTCAAATCGTCTGG 67553 >seq17032 Length=5332 Score = 131 bits (144), Expect = 2e-25 Identities = 107/130 (82%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 19450 TTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACATGTTC 19509 || |||||||| ||||||||||| |||||||| ||||||||||||||||||||||| | | Sbjct 870 TTGGATAAATCAACTTCTTCAACAGTCCAAAATGAAGCCTCTGCTTTTTTATACATCTGC 929 Query 19510 CATATATCACGATATTGTATAGGAAATATAACAAATCTATTTTTATTTTCTTTAAGAATA 19569 || ||||| | |||| || ||||||| |||||||| | ||||||||| |||| | Sbjct 930 CAAATATCTGGCCATTGAATGGGAAATACAACAAATCGACGAGGATTTTCTTTGAGAAGA 989 Query 19570 GGTTCCATTT 19579 ||||||| || Sbjct 990 GGTTCCAATT 999 Score = 95.1 bits (104), Expect = 1e-14 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 19255 TACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCT 19314 |||||||| ||||||| ||||| || |||| |||||||| || ||||| | || ||| Sbjct 446 TACATTTCAGAATGAACGTTTTCCATGGCCACTTGAAATCCATAGAAACAACGAGCCTCT 505 Query 19315 GTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTA 19374 || | || ||||| | ||| | ||| ||||||||||| ||||| || || || Sbjct 506 GTCACTTGAACTTCTTGGCTAAAGCGTTCCACCAAATTTTCGTTAACAATACCGTCGGAT 565 Query 19375 GCTGCAAAAAATGCTAATACATGTTTAATAAA 19406 || || ||||| ||||| | |||| |||||| Sbjct 566 GCAGCGAAAAAGGCTAAAATATGTGAAATAAA 597 >seq29084 Length=6691 Score = 95.1 bits (104), Expect = 1e-14 Identities = 158/224 (71%), Gaps = 7/224 (3%) Strand=Plus/Minus Query 18766 TTTTTGA-ATCCTAATTCTAATAGTAGTCTATCCGCTACAAATTTAATATATGTGTTCAT 18824 |||| || |||| || || | |||||||| || || ||||||| ||| || | ||| Sbjct 788 TTTTGGACATCCCAACTCAAGAAGTAGTCTGTCGGCAACAAATTCAATGTACTGGCACAT 729 Query 18825 CATATCACAATTCATTCCTATTAATTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTC 18884 || | |||||||| || || | || ||||| | || || || | ||| |||||||| Sbjct 728 CAATTTGCAATTCATGCCGATCATTTCCACAGGCAAAGCGTCAGTTAAAAACTCTTGTTC 669 Query 18885 TATATTTACTGCCTCTGATATAATAGATACAACTCTATCTTCATTAGGAGGGTATAGAA- 18943 ||| ||||| ||| || || || | |||| |||| ||| || | | ||| Sbjct 668 AATAGACACTGCGTCTTTAATTATTGAAATCACTCGTTCTT---TAGATGGTTTTTGAAC 612 Query 18944 GATGT--TTAAACATCAAACATGCAAAATCACAATGTAGTCCCT 18985 ||||| |||||||||| ||| || || ||||| |||||||||| Sbjct 611 GATGTGTTTAAACATCAGACACGCGAAGTCACAGTGTAGTCCCT 568 Score = 91.5 bits (100), Expect = 2e-13 Identities = 76/93 (82%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 18657 CATTACTCCCATTTTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTC 18716 ||| || ||| |||||||||||| ||||| | ||||| |||||||| || |||||||| Sbjct 1347 CATGACACCCCACTTTTGATATTCGCCAACTTTCTTTTCGAAGAAATTGGTCTTTCCCTC 1288 Query 18717 TAATGATATACATTCCATAAAATCAAATGGATT 18749 || ||| ||| ||||| |||||||||||||| Sbjct 1287 TAGTGAAATATGCTCCATGAAATCAAATGGATT 1255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561851635224000