Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptopilina_20clavipes_20[genbank_20GCA_5F001855655.1_202016-10-28] 36,600 sequences; 255,343,917 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq22245 123 7e-23 seq22395 102 2e-16 seq26033 93.3 1e-13 >seq22245 Length=31558 Score = 123 bits (136), Expect = 7e-23 Identities = 207/294 (70%), Gaps = 8/294 (3%) Strand=Plus/Plus Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634 |||||| |||||| || ||||||||||| ||||||||| | |||||||| || ||| Sbjct 16161 TCCATAGCCTTGATCAATCGACGCTGAATGTAACCAGTTTCGGCAGTTTTTACCGCAGTA 16220 Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-AGCCC 302693 || || ||||| ||||||| |||||||| ||||| | | || ||| ||| || || Sbjct 16221 TCGATAAGACCTTCACGACCGCCCATAGCGTGGAAATAAAATTCGGACGG-CGTGAGACC 16279 Query 302694 CCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGG--CG-AATCGTCGAACTTGGT 302750 | | | || | || ||||| || | || |||||| || ||||||| |||| | Sbjct 16280 AGCGAGGTATGAATTTTCCACGAAGCCTCTCGACTCGGGACCGTAATCGTC---CTTGAT 16336 Query 302751 AAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTG 302810 ||||| |||| || || || | || | || || ||||| || || |||||||| Sbjct 16337 GAAGTGAGGCAAAGTTCTTTTGCGGAAACCAAACGGTATTCGCTTACCCTCCACGTTCTG 16396 Query 302811 CTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGCC 302864 ||||||| ||| | ||| | || || ||||| | | | ||||||||||| Sbjct 16397 TTGTCCCACGCAAGCAATAACTTGAGAGATATTGATGTTAGATCCCTTGGAGCC 16450 >seq22395 Length=14513 Score = 102 bits (112), Expect = 2e-16 Identities = 142/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 289028 TACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTG 289087 ||||||| ||||||||||| || || || | | ||| || | ||||| ||| || || | Sbjct 5745 TACCAACGGCATCAATTTCATCGATAAATAATATACAAGGCGCATTTTTTCTAGCCATCG 5686 Query 289088 CAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAG 289147 |||| | |||| ||||| |||| |||| || ||| ||||||| | |||||| ||| Sbjct 5685 CAAACATGTCTCGGACACGTGATGGACCAACGCCGACAAACATTTCCAAAAATTCGGAAC 5626 Query 289148 CGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCT 289207 | || ||| ||| || | ||||| || ||||| ||| ||| | |||| | || | Sbjct 5625 CTGACACTGTAATAAAAGGCACATTCGCCTCGCCCGCTGTTGCTTTTGCCAATAAAGTTT 5566 Query 289208 TACCTGTTCCAGGTGGTCC 289226 | || ||||| || || || Sbjct 5565 TTCCAGTTCCCGGAGGACC 5547 >seq26033 Length=300418 Score = 93.3 bits (102), Expect = 1e-13 Identities = 145/202 (72%), Gaps = 4/202 (2%) Strand=Plus/Plus Query 251845 ATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGTCCATCA 251904 || ||||||||| |||||||| || ||||| ||||| || || ||| | ||||| || Sbjct 5466 ATTGTCATACGAGATGGAATAGCGTGAGGATTAATGATAATATCCGGTGTGAGTCCCTC- 5524 Query 251905 GCAGT-GAAGGGCATATCCTTTTCCTCAATAATG-TTTCCAATAGTTCCCTTTTGTCCGT 251962 |||| ||||||||||| ||| | || || || | ||| |||||||||||||| | Sbjct 5525 GCAGGAGAAGGGCATAT-CTTCTTGTCTGTACTGAATACCACACGTTCCCTTTTGTCCAT 5583 Query 251963 GACGAGAACTGAACTTATCACCAATAACAGGACGGCGAACACTACGAAGGCGAACCTTAC 252022 |||| || ||||| || ||||| ||| |||||||| |||| | | || | Sbjct 5584 GACGTGAGGCAAACTTGTCTCCAATTTGTGGAATTCGAACACTTCGAACTCTGATTTTGC 5643 Query 252023 AGAAGTTGTAACCATCACCGTT 252044 | || ||||| || |||| ||| Sbjct 5644 AAAATTTGTATCCTTCACTGTT 5665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471127409534200