Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptopilina_20clavipes_20[genbank_20GCA_5F001855655.1_202016-10-28] 36,600 sequences; 255,343,917 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq32563 98.7 2e-14 seq15042 96.9 5e-14 seq33795 93.3 7e-13 >seq32563 Length=6877 Score = 98.7 bits (108), Expect = 2e-14 Identities = 165/239 (69%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 1485472 TACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATG 1485531 ||||||||||| ||||||||||| || ||||| |||||| |||| ||||| ||| | | | Sbjct 5700 TACTTGGTGACAGCCTTGGTACCTTCAGAGACAGCGTGCTTGGCAAGTTCACCGGGAAGG 5759 Query 1485532 ATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGC 1485591 | || | || || || || || || || | || ||| | |||||| | Sbjct 5760 AGAAGCCTGACAGCAGTTTGTATTTCCCGTGATGTTATGGTGGATCTCTTGTTTTATTGT 5819 Query 1485592 GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATG 1485651 |||| |||| | |||| |||| || |||| || |||||||| || ||||||| Sbjct 5820 GCCAAGCGGGAAGATTCGGCAGCGATACGTTCGAAGATATCGTTGACGAAGCTGTTCATG 5879 Query 1485652 ATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1485710 || ||| | |||| |||||| || ||||| || || || || | ||||||||| Sbjct 5880 ATGCTCATGGCTTTGCTGGAGACACCAGTATCGGGATGTACTTGTTTCAACACCTTGTA 5938 >seq15042 Length=8128 Score = 96.9 bits (106), Expect = 5e-14 Identities = 166/241 (69%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||| || || ||||||||||| || || |||||||||||| |||| ||||| || | | Sbjct 2877 TGTATTTAGTAACGGCCTTGGTGCCTTCGGAGACGGCGTGCTTGGCGAGTTCACCAGGTA 2818 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || || | || ||||| || || || |||| | ||| || | |||||| | Sbjct 2817 GGAGAAGCCTGACAGCGGTTTGAATTTCCCGGGAGGTGATGGTTGACCTCTTGTTGTAGT 2758 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | |||| ||| | |||| |||| || |||| || |||||||| || ||||| Sbjct 2757 GGGCCAAACGGGAAGATTCGGCAGCGATACGTTCGAAAATATCGTTGACGAAACTGTTCA 2698 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| |||||| || ||| || || || || || | |||||||| Sbjct 2697 TGATGCTCATGGCCTTGCTGGAGACACCAGTGTCAGGATGAACTTGTTTCAACACCTTGT 2638 Query 1485710 A 1485710 | Sbjct 2637 A 2637 >seq33795 Length=8195 Score = 93.3 bits (102), Expect = 7e-13 Identities = 164/239 (69%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 1485472 TACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATG 1485531 ||||||||||| ||||| || || || |||||||| ||| |||| ||||| || | | | Sbjct 2929 TACTTGGTGACAGCCTTCGTGCCTTCAGAGACGGCATGCTTGGCGAGTTCACCAGGAAGG 2988 Query 1485532 ATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGC 1485591 | || | || || || || || || |||| | ||| ||| | |||||| | | Sbjct 2989 AGAAGCCTGACAGCAGTTTGAATTTCCCGGGAGGTGATGGTGGATCTCTTGTTGTAGTGA 3048 Query 1485592 GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATG 1485651 |||| |||| | |||| |||| || |||| || || || ||||| ||||||| Sbjct 3049 GCCAAGCGGGAAGATTCGGCAGCGATACGTTCGAAGATATCATTAACAAAGCTGTTCATG 3108 Query 1485652 ATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1485710 || ||| | ||| | || | || |||||| || || ||||| | ||||||||| Sbjct 3109 ATGCTCATGGCTTTACTAGAAACACCAGTGTCGGGATGGACTTGCTTCAACACCTTGTA 3167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7912353091067400