Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptopilina_20clavipes_20[genbank_20GCA_5F001855655.1_202016-10-28] 36,600 sequences; 255,343,917 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq29577 122 2e-22 seq23214 95.1 2e-14 >seq29577 Length=33434 Score = 122 bits (134), Expect = 2e-22 Identities = 148/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 143003 CGATCCCGTCTTGCATATAGAACTTAGGAGATGGGCGGATGTTTTTCTTATAGCGCCCTT 143062 |||||| || ||||| || || || | |||||| ||| |||||||||||||||| || Sbjct 7123 CGATCCTGTTTTGCACATCGATCTGGTTAAATGGGCCGATCTTTTTCTTATAGCGCCTTT 7064 Query 143063 AACGGCAAATACGTTAGCAAAAATAGCCAACGGTATATGCGATAATTTACTAACATCTAT 143122 | || || ||| | | ||| |||| | |||||| || || ||| | |||| | | Sbjct 7063 AGATGCCAACACGCTCGGCAAATTAGCGAGCGGTATTTGTGACAATATTTTAACGTGCGT 7004 Query 143123 AGTAAGAGCCTGGGATATAAATAAACCTCTTATTTTTTGTCCCGCTATGAATAGCCTTAT 143182 | | |||| |||||| |||||||||||||||||| || || || ||||| | | || Sbjct 7003 CGCACGAGCTTGGGATCCAAATAAACCTCTTATTTTCTGCCCGGCAATGAACACCAGAAT 6944 Query 143183 GTGGGAACATCCTATTACAGAA 143204 |||| | ||||| |||||||| Sbjct 6943 GTGGAATCATCCCGTTACAGAA 6922 >seq23214 Length=2476 Score = 95.1 bits (104), Expect = 2e-14 Identities = 139/195 (71%), Gaps = 4/195 (2%) Strand=Plus/Minus Query 183010 ACACATGACCCTCTATGGAATGCATCACAAATACAGATGATGAGAGAAGGAAAAATGCAT 183069 || |||||| | ||||||||||| | |||| || | || ||||||||| |||||| Sbjct 1992 ACCCATGACGATTTATGGAATGCAGCTCAAAATCAATTAGTGCAAGAAGGAAAGATGCAT 1933 Query 183070 AGTTTTTTACGAATGTACTGGGCTAAAAAGATACTTGAATGGACAAGAACTCCGGAAGAT 183129 | |||||| ||||||| ||||| ||||| || || || ||||| |||||| |||| | Sbjct 1932 GGATTTTTAAGAATGTATTGGGCGAAAAAAATTCTCGAGTGGACCGAAACTCCAGAAGCT 1873 Query 183130 GCTTTGAGTTATAGT--ATCTATATGAACAATAAGTACGAACTAGACGGTACGGATCCTA 183187 || || | || || || || |||| | || ||| | || ||| ||||||| Sbjct 1872 GCATTAA--AATGGTCCATTTACTTGAATGACAAATACAGCATGGATGGTCGCGATCCTA 1815 Query 183188 ACGGATACGTAGGTT 183202 | ||||| || |||| Sbjct 1814 ATGGATATGTCGGTT 1800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 902997889376000