Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptopilina_20clavipes_20[genbank_20GCA_5F001855655.1_202016-10-28] 36,600 sequences; 255,343,917 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq63 145 5e-30 seq23413 107 1e-18 >seq63 Length=129227 Score = 145 bits (160), Expect = 5e-30 Identities = 171/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||||| | ||| | ||||| || |||||| |||||||| || ||||||||||| Sbjct 63897 CCACCTCGAAGACGGAGAACCAAGTGAAGAGTGGATTCTTTTTGGATATTGTAATCGGAA 63838 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || |||||| | || ||||||||||| || || || ||||| | ||||||||| | || Sbjct 63837 AGCGTGCGTCCATCTTCCAATTGTTTGCCAGCGAAGATCAATCTTTGCTGATCTGGTGGT 63778 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | || |||||||| ||||||| | || |||| || | ||||||| | ||| || Sbjct 63777 ATTCCCTCTTTGTCTTGAATTTTC-GCTTTTACATTCTCAATGGTGTCGGAAGCTTCAAC 63719 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 |||| || || ||||| || ||||| ||||| || || ||||||||| Sbjct 63718 TTCAAGAGTAATGGTTTTGCCAGTTAAAGTTTTAACGAAAATCTGCATA 63670 Score = 120 bits (132), Expect = 2e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||||| | ||| | || ||||| | |||| |||||||| || ||||||||||| Sbjct 62243 CCACCTCGAAGACGGAGAACTAAATGCAAAGTGGATTCTTTTTGGATATTGTAATCGGAA 62184 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || |||||| | || ||||||||||| || || |||||||| | |||||||||| | || Sbjct 62183 AGCGTGCGTCCATCTTCCAATTGTTTGCCAGCGAAAATCAATCTCTGCTGATCTGGTGGA 62124 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | || ||||| || |||||| | || |||| || | || || | || || Sbjct 62123 ATTCCCTCTTTATCTTGAATTTT-GGCTTTTACATTCTCAATTGTATCTGAAGCCTCAAC 62065 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| || || ||||| || ||||| ||||| || || |||||||| Sbjct 62064 TTCAAGAGTAATGGTTTTGCCAGTTAAAGTTTTAACGAAAATCTGCAT 62017 Score = 116 bits (128), Expect = 2e-21 Identities = 172/240 (72%), Gaps = 4/240 (2%) Strand=Plus/Minus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || ||||| | | ||| | |||||||| || || || ||||| || Sbjct 62027 AAAATCTGCATTCCACCACGAAGACGAAGGACCAAATGGAGTGTTGATTCCTTTTGAATA 61968 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 |||||||| || | ||| ||| | || |||| ||| ||||| ||||| ||||| ||||| Sbjct 61967 TTGTAATCAGACAATGTTCGTCCATCTTCCAGTTGCTTTCCAGCAAAGATCAATCGCTGT 61908 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 |||||| | || | |||||||| || ||||| || || ||||| || | ||||| Sbjct 61907 TGATCTGGTGGGATTCCTTCTTTATCTTGGATTTT-TGCTTTAACATTCTCGATCGTGTC 61849 Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || |||| || ||||| || || || || ||||||||||| |||||||| Sbjct 61848 AGAAGCCTCAACCTCAAGGGTAATCGTCTTCCCCGTCAAAGTTTTTACAAAAATCTGCAT 61789 Score = 98.7 bits (108), Expect = 7e-16 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 ||||| || || ||||||||||| ||||||||| | || ||||||||||| || || ||| Sbjct 63177 TCTTTCTGAATATTGTAATCGGAAAGTGTGCGTCCATCTTCCAATTGTTTGCCAGCGAAA 63118 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTT 33665 ||||| | |||||||||| | || | || |||||||| |||||| Sbjct 63117 ATCAATCTCTGCTGATCTGGTGGAATTCCCTCTTTGTCTTGAATTTT 63071 Score = 98.7 bits (108), Expect = 7e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| | |||||||| || || || ||||| || || |||||||| Sbjct 63441 CCACCACGAAGACGAAGAACCAAATGAAGTGTTGATTCCTTTTGAATATTATAATCGGAC 63382 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | || ||| | || || | ||| ||||| ||||||||||| | || |||||| | || Sbjct 63381 AAAGTACGTCCATCTTCAAGTTGCTTTCCAGCAAAAATCAATCTTTGTTGATCTGGTGGG 63322 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | || |||||||| |||||| | | ||| | || | |||||| | ||| || Sbjct 63321 ATTCCCTCTTTGTCTTGAATTTT-AGCCTTAACGTTCTCGATGGTGTCAGAAGCTTCAAC 63263 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| |||||||| || || |||||||| || || ||||| Sbjct 63262 TTCCAAGGTGATAGTTTTACCAGTCAAGGTTTTTACGAAAATTTGCAT 63215 >seq23413 Length=131177 Score = 107 bits (118), Expect = 1e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 |||||||| || || |||||| || || ||||| ||||| | || ||| |||| ||| Sbjct 117950 ACCAAATGAAGGGTCGACTCTTTCTGAATATTGTAGTCGGACAAAGTTCGTCCGTCCTCC 118009 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 ||||||||||| || || |||||||||||||||||| | || | || || ||||| Sbjct 118010 AATTGTTTTCCAGCGAAGATCAAACGCTGCTGATCTGGAGGAATTCCCTCCTTGTCCTGG 118069 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 ||||| || || || | || | || ||| | ||| || || | || |||||||| Sbjct 118070 ATTTT-TGCTTTCACGTTCTCGATCGTATCGGAGGCTTCAACCTCTAATGTAATCGTTTT 118128 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || | ||||| || || || |||||| Sbjct 118129 TCCAGTGAGAGTTTTCACGAAAATTTGCATA 118159 Score = 89.7 bits (98), Expect = 3e-13 Identities = 155/223 (70%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 ||| | ||| | ||| ||||| |||||| || || || || ||||| | || | | | Sbjct 118171 ACGAAGCACGAGATGGAGAGTCGACTCTTTCTGGATATTATAGTCGGATAAAGTTCTTCC 118230 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 || ||||| || |||||||| || |||||||||||||||||| | || | || || || Sbjct 118231 ATCCTCCAACTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATTCCCTCCTT 118290 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712 ||| ||||| || || || | || | |||||| | || || || | |||| Sbjct 118291 GTCCTGGATTTT-TGCTTTCACGTTCTCGATCGTGTCGGAGGCCTCAACTTCCAAGGTGA 118349 Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGTTGG 33755 |||| || || || | ||||| || || || ||||| || || Sbjct 118350 TCGTCTTCCCGGTGAGAGTTTTCACGAAAATTTGCATTGTCGG 118392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328557377472000