Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptopilina_20clavipes_20[genbank_20GCA_5F001855655.1_202016-10-28] 36,600 sequences; 255,343,917 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq33810 167 3e-36 >seq33810 Length=88678 Score = 167 bits (184), Expect = 3e-36 Identities = 206/282 (73%), Gaps = 0/282 (0%) Strand=Plus/Minus Query 68643 TATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAG 68702 ||||||| ||| || || || || | ||||| ||||| || |||||| || | | || Sbjct 67435 TATAATTTCATTTTTCATATCTTCGTCCCACAGATTTCTTTCAGTTAAATCTTTCAAAAG 67376 Query 68703 ATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGT 68762 ||| || ||||| ||||||||||| || || | || | | | ||||||||||| || Sbjct 67375 ATGAGGGTTAACAATTTGAAATTCTCCCGAGAGAACGCGTCTTGAATAAATATTACTTGT 67316 Query 68763 ATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGG 68822 || ||||| | |||||||| || |||| |||||| |||||||| || |||||||| || Sbjct 67315 GTACGGTTCAATTGATTCATTGTTGCCCAAAATTTGTGCAGTTGAAGCTGTTGGCATTGG 67256 Query 68823 TGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCA 68882 || | |||||| ||| | || ||||| ||| |||||| | |||| | || ||| Sbjct 67255 AGCTAACAATAACGAATTACGAACTCCATGAGTTGCGATTTTTGCCTTTAAAGCTTGCCA 67196 Query 68883 ATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTG 68924 ||||||||||| | ||| |||||||| | || ||||| Sbjct 67195 ATCCCAAAGATTTGTTGGCGTTACATTCCACATGTCATATTG 67154 Score = 163 bits (180), Expect = 4e-35 Identities = 380/562 (68%), Gaps = 16/562 (3%) Strand=Plus/Minus Query 69116 TACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAA 69175 ||||||| ||||| ||||| ||| || | |||||||| || || || || ||||| Sbjct 66806 TACCGATTGGTCTGTGTCTGAAATTGGATTTCTCAGCTTCGGGTATTGGGTAGAAATTAT 66747 Query 69176 TATCTATAATTTTAT-TAAGATTTCGGACTACTACTTTAACCACGTCCTTTAG-TTTGAG 69233 | || |||||||||| |||| |||| || | ||| | || || || ||||| Sbjct 66746 TGTCAATAATTTTATCTAAG-TTTCTAGTAACAATTTTTGTTATCTCTTTCAGCTTTGA- 66689 Query 69234 AAAATCAAA-----TCGTCCATCTATA-ACAAACATATTCAGTGCTACAGATGCTAGATT 69287 ||| ||||| | || | || || ||||| || | || | || || | ||| Sbjct 66688 AAAGTCAAAAGTTTTAGTACTGGAATTGACGAACATGTTAACAGCAATTGAAGCCAAATT 66629 Query 69288 ACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACA 69347 ||||| || || |||| | | | | |||||| || || || || || |||||||| || Sbjct 66628 GCAAACGGCCACTTCATCTGGACTAGAATATTGAATAATTTCAGTGCAGAGATTACTGCA 66569 Query 69348 TTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAAT 69407 ||| ||||| || | |||||| ||||| ||| | || ||| || ||||| || || Sbjct 66568 TTTTATAGTTCCAATATTTTGTTGATTTGATTTTCTATTGCAGTGATCTTTGTACAGCAT 66509 Query 69408 AAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATT 69467 | || || || ||||||| || || | ||| | |||| | | | | || || Sbjct 66508 GTAAGGGGTCCCGGTTTCAACTTGTGAAATCAAAATTGCAGTCCATAGGTCACGCGCTTT 66449 Query 69468 TATT--ACGGTCTTGTAAC-GCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTC 69524 ||| ||| | || | || | || |||| |||| |||||| || || ||||| Sbjct 66448 AATTTGACGTT--TGAATTTGCCT-TCCGTTTCGTATTTTGTATAGAGAACATCAAATTC 66392 Query 69525 ATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATC 69584 ||||||||||||||| | | || ||| |||| | |||||||| || | ||||| | Sbjct 66391 TTCTCCCCAAACATCAGCAAGACCTGGAGATTCGTGAGGACACATTAAGGTCCACATTCC 66332 Query 69585 ATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCT 69644 || ||| | || ||||||||||||| ||| |||||||||||| | ||| | || || Sbjct 66331 GTCGTCCATTACACGTTTCATAAATAAATCCGGAATCCAAAGACCATAAAATAATTCCCT 66272 Query 69645 GGTTCTATTTTCTTCATTTCCT 69666 | | || ||| || |||||| Sbjct 66271 CGCGCGATATTCCTCTTTTCCT 66250 Score = 129 bits (142), Expect = 8e-25 Identities = 199/284 (70%), Gaps = 0/284 (0%) Strand=Plus/Minus Query 69664 CCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATAT 69723 || |||||||| || | ||||||||| || | ||| |||| |||||||||||| | ||| Sbjct 66170 CCAGTATTTTTCTTTAAATCGAGAAATTCGAAAATGTCAGCATGCCATGGTTCAATATAA 66111 Query 69724 ATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTA 69783 || || | ||||||||| ||| ||||| || ||||| | ||||| || || ||||| Sbjct 66110 ATTGCAAATGCTCCCGGTCTTTTGTTTCCACCTTGATCAACGTATCGAGCGGTACTATTA 66051 Query 69784 TAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTT 69843 || ||||| | ||| |||| || |||||| |||| || | ||||| | || | || Sbjct 66050 TAAACTCTAATCATAGGAACAAGACCATTGGATTCTCCTTGAGTTCCTGCGATGCGAGTT 65991 Query 69844 CCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGA 69903 ||| | || | ||| | || | || ||||| || || |||| || || Sbjct 65990 CCTTTGGCTCTGATACAATGAACGTTAACGCCAATTCCACCAGCGGATTTACTAATGAGT 65931 Query 69904 GCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATC 69947 ||||| ||| |||||||| ||||| || || || || || || Sbjct 65930 GCACATTTTTTTAATGTGTCGTATATGCCTTCAATACTGTCTTC 65887 Score = 93.3 bits (102), Expect = 6e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 68971 CCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAA 69030 |||| | |||||| | ||||||||| ||||| ||||| || ||||||| ||||| || Sbjct 67035 CCTTTTTCTTCAGCGATTTCACAACTAGCCTCCAATGCTCCATAATAAAGAGTTTCAAAT 66976 Query 69031 ATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAATGTAAAAGAATAAAT 69090 || | |||| | | ||| |||||| ||| || |||||| | | | | | |||| Sbjct 66975 ATTTGGATATTTAACTTTTGAGCTTCTTCACTCTCAAATGGAAAGCGCATTAACAAAAAT 66916 Query 69091 GCATCTGCCAATCCCTGAACCCCAATACC 69119 |||||||| |||||||| | |||||||| Sbjct 66915 GCATCTGCTAATCCCTGTATTCCAATACC 66887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686594539224000