Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptopilina_20clavipes_20[genbank_20GCA_5F001855655.1_202016-10-28] 36,600 sequences; 255,343,917 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq17032 118 8e-22 seq23173 114 1e-20 seq34676 91.5 1e-13 >seq17032 Length=5332 Score = 118 bits (130), Expect = 8e-22 Identities = 124/163 (76%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 43851 ttttggcgttttttGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTG 43910 |||| || ||||| ||||| |||||| || || || ||||||||||| || ||| Sbjct 584 TTTTAGCCTTTTTCGCTGCATCCGACGGTATTGTTAACGAAAATTTGGTGGAACGCTTTA 525 Query 43911 CGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAA 43970 |||||||||||| | |||| || || ||||| ||||| |||||| | ||||| |||| Sbjct 524 GCCAAGAAGTTCAAGTGACAGAGGCTCGTTGTTTCTATGGATTTCAAGTGGCCATGGAAA 465 Query 43971 ATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACAT 44013 | ||||||| |||||||| ||| ||||| || || ||||| Sbjct 464 ACGTTCATTCTGAAATGTATTCTCTACTGATCGACACTTACAT 422 Score = 95.1 bits (104), Expect = 1e-14 Identities = 84/105 (80%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 43684 AGAAAATCCGTCTAGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTA 43743 ||||||||| | | ||||| || ||||| ||||||| | || || ||||| ||||| Sbjct 980 AGAAAATCCTCGTCGATTTGTTGTATTTCCCATTCAATGGCCAGATATTTGGCAGATGTA 921 Query 43744 CAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTT 43788 ||||||||| |||| ||||||||||| | |||||||||||||| Sbjct 920 TAAAAAAGCAGAGGCTTCATTTTGGACTGTTGAAGAAGTTGATTT 876 >seq23173 Length=177085 Score = 114 bits (126), Expect = 1e-20 Identities = 212/310 (68%), Gaps = 6/310 (2%) Strand=Plus/Minus Query 19220 ATTGGAATGTGAAAGACATGCAAATTGGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTC 19279 ||||| || | || | ||| ||||| || || |||||| | || || |||| Sbjct 26893 ATTGGGATTTTCAAAAAATGGGTATTGGCGGTTTAGATAAAGAAGTGAGTGCCATTTTTC 26834 Query 19280 GTAGAGCATTTGTGTCGCGTGTTTTTTCTGCAGATGTCATTAAACAATTGGGATGTAAAC 19339 | |||||||||| || ||||| ||| | | || || | | ||| | || ||||||| Sbjct 26833 GAAGAGCATTTGCCTCACGTGTATTTCCGCCTGAAGTTGTCACGCAACTTGGTTGTAAAC 26774 Query 19340 ATGTTCGTGGACTTTTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAG 19399 | || ||| |||| || ||||| |||||||| ||| ||||||||||| || || Sbjct 26773 ACGTGAAGGGAATTTTACTCTATGGTCCACCGGGAACTGGTAAAACATTAATGGCACGAC 26714 Query 19400 AACTTAGTAAATTACT---TACAAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCT 19456 || || |||| | || | ||| || || || ||||| ||||| || |||| | Sbjct 26713 AAATTGGTAATATGCTGAATGCAAGGGAA---CCAAAGATTGTCAATGGCCCGCAAATTT 26657 Query 19457 TAAATAAATATGTAGGTCAATCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAG 19516 || | || || || ||| || |||| ||| | ||| | || || || |||||||||| Sbjct 26656 TAGACAAGTACGTGGGTGAAAGTGAAGCAAACATTCGAAGATTATTCGCCGACGCTGAAG 26597 Query 19517 AAGAACAAAA 19526 ||||| |||| Sbjct 26596 AAGAAGAAAA 26587 Score = 98.7 bits (108), Expect = 8e-16 Identities = 145/206 (70%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 19549 TTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTT------CT 19602 || ||||| || ||| | |||||| | ||||| || || || |||||| || Sbjct 26485 TTACACATAATTATATTCGATGAAATTGACGCTATTTGCAAAGCAAGAGGAAGTGTCGCT 26426 Query 19603 GGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTT 19662 ||| | ||| || ||||| || || || |||||| | || |||||| | |||||||| Sbjct 26425 GGTAATACTGGCGTTCATGATACCGTAGTTAATCAATTACTTTCAAAAATTGACGGTGTC 26366 Query 19663 AACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGC 19722 | || ||||||||||| | |||||||| ||||| ||| ||| ||| | || ||| Sbjct 26365 GATCAGTTGAATAATATTCTCGTTATTGGAATGACAAATCGACGGGATATGATTGACGAG 26306 Query 19723 GCCTTATTACGACCCGGTCGGTTGGA 19748 || ||| | ||||| || | ||||| Sbjct 26305 GCGTTACTTCGACCTGGAAGATTGGA 26280 >seq34676 Length=84891 Score = 91.5 bits (100), Expect = 1e-13 Identities = 170/250 (68%), Gaps = 0/250 (0%) Strand=Plus/Plus Query 40702 TAACTACaaaaaaaaTGTTTTGGAAAGGCATTGCAGAAGAACTGTTATGGTTTATCAAAG 40761 |||| |||||| | |||||| ||| | | || ||||| | ||||| || | Sbjct 20617 TAACGACAAAACGTGTCTTTTGGCGAGGAGTCGTCGAGGAACTTCTCTGGTTCATTCGTG 20676 Query 40762 GTTGTACTAATGCTAAGAAATTATCAGAAAGAGGAGTGCACATTTGGAATGCGCACAGTT 40821 | | || ||||| ||| ||||| | |||| | || || |||||| || | | |||| Sbjct 20677 GATCGACAAATGCCAAGGAATTAACGGAAAAATCCGTTCATATTTGGGATCCAAATAGTT 20736 Query 40822 CTAAAACATATTTGTCTAGCATAGGATTACAAGATAGGGATGAAGGTGATCTTGGTCCTG 40881 | | || | | | | ||||| ||| | || ||||| ||| | ||||||| Sbjct 20737 CCCGAGAATTTCTCGATTCCTGCGGATTCACTGATCGTGAAGAAGGCGATTTAGGTCCTG 20796 Query 40882 TTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATATGACACTATGTACTCTGATTATA 40941 ||||||||||||| | | ||||||||||||| |||||| || ||| || ||||||| | Sbjct 20797 TTTATGGATTTCAATGGAGACATTTTGGAGCTAAATATACCAACATGCACGCTGATTACA 20856 Query 40942 CCAATAAAGG 40951 || | |||| Sbjct 20857 CCGGTCAAGG 20866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397278709783000