Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptopilina_20clavipes_20[genbank_20GCA_5F001855655.1_202016-10-28] 36,600 sequences; 255,343,917 total letters Query= NC_028853.1 Length=50078 Score E Sequences producing significant alignments: (Bits) Value seq548 152 2e-32 seq348 152 2e-32 seq2205 118 3e-22 >seq548 Length=1173 Score = 152 bits (168), Expect = 2e-32 Identities = 303/446 (68%), Gaps = 7/446 (2%) Strand=Plus/Minus Query 38816 GTATAAATTTTCTTCCTAAATGCCACTTGGTAAAATTCTTGTAAGATTGTTTTATGGAAC 38875 || ||||||||||| ||||| | | |||| |||| | | || ||| | |||||| Sbjct 692 GTGTAAATTTTCTTTCTAAAGATAATATTGTAACATTCATCTTGCATAGTTCTGTGGAAC 633 Query 38876 CGTTCGCAGATACCATTCGTCTGGGGATGCTTCACTTTCGTTTTCGTATGCTCTATGTCA 38935 | ||| || || ||||| ||||| ||| |||| ||| | ||| || || | Sbjct 632 CTTTCACATATGCCATTAGTCTGTGGAGAACGAGCTTTGGTTCGAGAATGATCAATATTT 573 Query 38936 TTTATCGCTAAATAAAGCTCATAATCGTGATTTTCTACCTTGCCACAATATTCACTTCCT 38995 | || | ||||||| |||| ||| |||||||||| |||||||||| || | || Sbjct 572 TCTACCCCTAAATATAGCTGGTAAGCGTGATTTTCAGGTCTGCCACAATACTCTGTACCA 513 Query 38996 CGGTCAGTTAATATGCGTAACATCGGTAAACCTTGGCTT--TCAAAGTATGGTAACACTT 39053 || || || || | |||| || | || | || || |||||| | |||| || Sbjct 512 CGATCCGTCAAAACACGTAGCAATGATA--CTTTCTGTTCATCAAAGAACGGTACTACCC 455 Query 39054 TATCATTCAGCATATCCGCAGCACTGATAGCGGTCTTCATTGTATAAAGTTTTGCAAACG 39113 ||||||| || | ||| ||||| ||||||| ||| | ||| ||||| || ||||| | Sbjct 454 TATCATTAAGAAGATCTGCAGCTGTGATAGCAGTCCTTTCTGTGTAAAGCTTAGCAAAAG 395 Query 39114 CCACTTTACTGTAAGTATCAATAAACGTTTGTTGATAAATACGACCCACTCCTTTGAGGT 39173 | ||| | || ||||||| ||| ||||| || ||||| || || | ||||||| | Sbjct 394 CAACTCTGGAATAGGTATCAACAAAGGTTTGCTGGTAAATTCGTCCAATACCTTTGATAT 335 Query 39174 TGCCCACATAGAAAGTATCTTGTGAGCCAAGATAGCCAGGGTGTACCGTTTCAATTTCAC 39233 | || ||||| || | ||||| || | || || || || | ||||||||||| | Sbjct 334 TACCAACATAATAACTGTCTTGGCTACCTAAGTATCCTGGATGCTCTGTTTCAATTTCTC 275 Query 39234 CACAGGCAATCTCATCTTCTTTCTTA 39259 || ||| ||| | ||||| |||| Sbjct 274 CATGGGC---CTCTTTTTCTTCCTTA 252 >seq348 Length=1557 Score = 152 bits (168), Expect = 2e-32 Identities = 303/446 (68%), Gaps = 7/446 (2%) Strand=Plus/Plus Query 38816 GTATAAATTTTCTTCCTAAATGCCACTTGGTAAAATTCTTGTAAGATTGTTTTATGGAAC 38875 || ||||||||||| ||||| | | |||| |||| | | || ||| | |||||| Sbjct 895 GTGTAAATTTTCTTTCTAAAGATAATATTGTAACATTCATCTTGCATAGTTCTGTGGAAC 954 Query 38876 CGTTCGCAGATACCATTCGTCTGGGGATGCTTCACTTTCGTTTTCGTATGCTCTATGTCA 38935 | ||| || || ||||| ||||| ||| |||| ||| | ||| || || | Sbjct 955 CTTTCACATATGCCATTAGTCTGTGGAGAACGAGCTTTGGTTCGAGAATGATCAATATTT 1014 Query 38936 TTTATCGCTAAATAAAGCTCATAATCGTGATTTTCTACCTTGCCACAATATTCACTTCCT 38995 | || | ||||||| |||| ||| |||||||||| |||||||||| || | || Sbjct 1015 TCTACCCCTAAATATAGCTGGTAAGCGTGATTTTCAGGTCTGCCACAATACTCTGTACCA 1074 Query 38996 CGGTCAGTTAATATGCGTAACATCGGTAAACCTTGGCTT--TCAAAGTATGGTAACACTT 39053 || || || || | |||| || | || | || || |||||| | |||| || Sbjct 1075 CGATCCGTCAAAACACGTAGCAATGATA--CTTTCTGTTCATCAAAGAACGGTACTACCC 1132 Query 39054 TATCATTCAGCATATCCGCAGCACTGATAGCGGTCTTCATTGTATAAAGTTTTGCAAACG 39113 ||||||| || | ||| ||||| ||||||| ||| | ||| ||||| || ||||| | Sbjct 1133 TATCATTAAGAAGATCTGCAGCTGTGATAGCAGTCCTTTCTGTGTAAAGCTTAGCAAAAG 1192 Query 39114 CCACTTTACTGTAAGTATCAATAAACGTTTGTTGATAAATACGACCCACTCCTTTGAGGT 39173 | ||| | || ||||||| ||| ||||| || ||||| || || | ||||||| | Sbjct 1193 CAACTCTGGAATAGGTATCAACAAAGGTTTGCTGGTAAATTCGTCCAATACCTTTGATAT 1252 Query 39174 TGCCCACATAGAAAGTATCTTGTGAGCCAAGATAGCCAGGGTGTACCGTTTCAATTTCAC 39233 | || ||||| || | ||||| || | || || || || | ||||||||||| | Sbjct 1253 TACCAACATAATAACTGTCTTGGCTACCTAAGTATCCTGGATGCTCTGTTTCAATTTCTC 1312 Query 39234 CACAGGCAATCTCATCTTCTTTCTTA 39259 || ||| ||| | ||||| |||| Sbjct 1313 CATGGGC---CTCTTTTTCTTCCTTA 1335 >seq2205 Length=1524 Score = 118 bits (130), Expect = 3e-22 Identities = 230/338 (68%), Gaps = 4/338 (1%) Strand=Plus/Minus Query 38816 GTATAAATTTTCTTCCTAAATGCCACTTGGTAAAATTCTTGTAAGATTGTTTTATGGAAC 38875 || ||||||||||| ||||| | | |||| |||| | | || ||| | |||||| Sbjct 336 GTGTAAATTTTCTTTCTAAAGATAATATTGTAACATTCATCTTGCATAGTTCTGTGGAAC 277 Query 38876 CGTTCGCAGATACCATTCGTCTGGGGATGCTTCACTTTCGTTTTCGTATGCTCTATGTCA 38935 | ||| || || ||||| ||||| ||| |||| ||| | ||| || || | Sbjct 276 CTTTCACATATGCCATTAGTCTGTGGAGAACGAGCTTTGGTTCGAGAATGATCAATATTT 217 Query 38936 TTTATCGCTAAATAAAGCTCATAATCGTGATTTTCTACCTTGCCACAATATTCACTTCCT 38995 | || | ||||||| |||| ||| |||||||||| |||||||||| || | || Sbjct 216 TCTACCCCTAAATATAGCTGGTAAGCGTGATTTTCAGGTCTGCCACAATACTCTGTACCA 157 Query 38996 CGGTCAGTTAATATGCGTAACATCGGTAAACCTTGGCTT--TCAAAGTATGGTAACACTT 39053 || || || || | |||| || | | || || || |||||| | |||| || Sbjct 156 CGATCCGTCAAAACACGTAGCAATG--ATACTTTCTGTTCATCAAAGAACGGTACTACCC 99 Query 39054 TATCATTCAGCATATCCGCAGCACTGATAGCGGTCTTCATTGTATAAAGTTTTGCAAACG 39113 ||||||| || | ||| ||||| ||||||| ||| | ||| ||||| || ||||| | Sbjct 98 TATCATTAAGAAGATCTGCAGCTGTGATAGCAGTCCTTTCTGTGTAAAGCTTAGCAAAAG 39 Query 39114 CCACTTTACTGTAAGTATCAATAAACGTTTGTTGATAA 39151 | ||| | || ||||||| ||| ||||| || ||| Sbjct 38 CAACTCTGGAATAGGTATCAACAAAGGTTTGCTGGTAA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160058404368000