Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptopilina_20clavipes_20[genbank_20GCA_5F001855655.1_202016-10-28] 36,600 sequences; 255,343,917 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq23413 123 2e-23 seq63 116 3e-21 >seq23413 Length=131177 Score = 123 bits (136), Expect = 2e-23 Identities = 166/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||||||||| ||||||||||| ||||| ||| |||||| | || || ||| | || Sbjct 118158 ATGCAAATTTTCGTGAAAACTCTCACTGGAAAAACGATTACATTAGAGGTTGAAGCCTCC 118099 Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || |||| | || || ||| |||||| ||||| || || |||| || | Sbjct 118098 GATACGATCGAGAAC--GTGAAAGCAAAAATCCAGGACAAGGAGGGAATTCCTCCAGATC 118041 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| || || || || || |||||||||||||| |||| ||| | |||||||| |||| Sbjct 118040 AGCAGCGTTTGATCTTCGCTGGAAAACAATTGGAGGACGGACGAACTTTGTCCGACTACA 117981 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 | || || |||||| || | ||||||||| | ||| | ||||| || Sbjct 117980 ATATTCAGAAAGAGTCGACCCTTCATTTGGTTCTCCGTCTCCGTGGAGG 117932 >seq63 Length=129227 Score = 116 bits (128), Expect = 3e-21 Identities = 165/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848 |||||||||||| || |||||| | ||||| ||| ||||| |||| || ||| | Sbjct 63898 AATGCAAATTTTCGTCAAAACTTTAACTGGTAAAACCATTACTCTTGAAGTTGAAGCTTC 63957 Query 27849 CGACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAG 27906 |||| || | ||| || ||| |||||| |||||||| || |||| || Sbjct 63958 CGACACCATTGAGAAT--GTAAAAGCAAAAATTCAGGACAAAGAGGGAATTCCACCAGAT 64015 Query 27907 CAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTAC 27966 |||||| | || || || ||||| |||||||| || || | |||| |||||| |||||| Sbjct 64016 CAGCAAAGATTGATCTTCGCCGGTAAACAATTAGAAGATGGTCGCACCTTGTCTGATTAC 64075 Query 27967 AACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 || ||||||||||| |||| | || |||||| | ||| | || || || Sbjct 64076 AATATCCAAAAAGAATCCACTCTTCACTTGGTTCTCCGTCTTCGAGGTGG 64125 Score = 107 bits (118), Expect = 1e-18 Identities = 163/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848 |||||||||||| || |||||| | ||||| ||| ||||| |||| || ||| | Sbjct 64126 AATGCAAATTTTCGTCAAAACTTTAACTGGTAAAACCATTACTCTTGAAGTTGAAGCTTC 64185 Query 27849 CG--ACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAG 27906 || || || | ||| || ||| |||||| |||||||| || |||| || Sbjct 64186 CGACACCATTGAGAAT--GTAAAAGCAAAAATTCAGGACAAAGAGGGAATTCCACCAGAT 64243 Query 27907 CAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTAC 27966 |||||| | || || || ||||| |||||||| || || | |||| |||||| ||||| Sbjct 64244 CAGCAAAGATTGATCTTCGCCGGTAAACAATTAGAAGATGGTCGCACCTTGTCTGATTAT 64303 Query 27967 AACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 || || || ||||| || |||||||| ||| | ||| | ||||| || Sbjct 64304 AATATTCAGAAAGAATCTACGTTGCATTTAGTTCTTCGTCTCCGTGGTGG 64353 Score = 102 bits (112), Expect = 6e-17 Identities = 164/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848 |||||| ||||| || |||||| | ||||| ||| ||||| |||| || || | Sbjct 62016 AATGCAGATTTTCGTTAAAACTTTAACTGGCAAAACCATTACTCTTGAAGTTGAGGCTTC 62075 Query 27849 CGA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAG 27906 || | || | ||| || ||| ||||| || ||||| || |||| || Sbjct 62076 AGATACAATTGAGAAT--GTAAAAGCCAAAATTCAAGATAAAGAGGGAATTCCACCAGAT 62133 Query 27907 CAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCA-GCTTGTCCGATTA 27965 ||||| | || ||||| || || ||||||||||| || | ||||| |||| |||||||| Sbjct 62134 CAGCAGAGATTGATTTTCGCTGGCAAACAATTGGAAGATGGACGCACGCTT-TCCGATTA 62192 Query 27966 CAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 ||| ||||||||||| |||||||||||| ||| | ||| | || || || Sbjct 62193 CAATATCCAAAAAGAATCCACTTTGCATTTAGTTCTCCGTCTTCGAGGTGG 62243 Score = 100 bits (110), Expect = 2e-16 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| ||||| || |||||| | ||||| ||| ||||| |||| || ||| || Sbjct 63671 ATGCAGATTTTCGTTAAAACTTTAACTGGCAAAACCATTACTCTTGAAGTTGAAGCTTCC 63730 Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| || | ||| || ||| ||||| |||||||| || | || || | Sbjct 63731 GACACCATTGAGAAT--GTAAAAGCGAAAATTCAAGACAAAGAGGGAATACCACCAGATC 63788 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCA-GCTTGTCCGATTAC 27966 ||||| | || || || || || ||||||||||| || | ||||| |||| ||||||||| Sbjct 63789 AGCAAAGATTGATCTTCGCTGGCAAACAATTGGAAGATGGACGCACGCTT-TCCGATTAC 63847 Query 27967 AACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 || ||||||||||| |||| | || |||||| | ||| | || || || Sbjct 63848 AATATCCAAAAAGAATCCACTCTTCACTTGGTTCTCCGTCTTCGAGGTGG 63897 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||||||||| |||| || |||||| | || || |||||||| |||||||| || Sbjct 62731 GACAAAGAAGGAATTCCACCAGATCAGCAAAGATTGATCTTTGCCGGTAAACAATTAGAA 62790 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 || | |||| |||||| ||||| || || || ||||| || |||||||| ||| | Sbjct 62791 GATGGTCGCACCTTGTCTGATTATAATATTCAGAAAGAATCTACGTTGCATTTAGTTCTT 62850 Query 28003 CGTTTGCGTGGCGG 28016 || | ||||| || Sbjct 62851 CGACTCCGTGGTGG 62864 Score = 82.4 bits (90), Expect = 5e-11 Identities = 151/221 (68%), Gaps = 18/221 (8%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||||||||| || |||||| ||||||| ||| ||| || | || || ||| | Sbjct 64355 ATGCAAATTTTCGTTAAAACTTTTACTGGTAAAACTATCACCTTGGAAGTTGAAGCTTCT 64414 Query 27850 GACGATGTACAATCG-----GTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904 ||| || |||| ||||| ||||| |||||||| || | || | Sbjct 64415 GAC-----ACCATCGAGAACGTCAAGGCTAAAATTCAAGACAAAGAGGGAATCCCACCAG 64469 Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGA----CGAACGCAGCTTGTCC 27960 | || ||| | || || |||||||| |||||| |||| || ||||||| | ||| Sbjct 64470 ATCAACAAAGATTGATCTTTGCCGGTAAACAACTGGAGGATGGTCGAACGC----TATCC 64525 Query 27961 GATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTT 28001 ||||| || || |||||||| |||| | ||||||||||| Sbjct 64526 GATTATAATATTCAAAAAGAATCCACTCTTCATTTGGTTTT 64566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355703663128200