Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptopilina_20clavipes_20[genbank_20GCA_5F001855655.1_202016-10-28] 36,600 sequences; 255,343,917 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq33810 188 1e-42 seq17032 98.7 1e-15 >seq33810 Length=88678 Score = 188 bits (208), Expect = 1e-42 Identities = 381/559 (68%), Gaps = 10/559 (2%) Strand=Plus/Minus Query 77524 TACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAA 77583 |||| || ||||| ||||| |||||| | | |||||| || || || || ||||| Sbjct 66806 TACCGATTGGTCTGTGTCTGAAATTGGATTTCTCAGCTTCGGGTATTGGGTAGAAATTAT 66747 Query 77584 TGTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAA 77643 |||| |||||||||| | |||||| ||| | ||| | || || || || || Sbjct 66746 TGTCAATAATTTTATCTAAGTTTCTAGTAACAATTTTTGTTATCTCTTTCAGCTTTGAAA 66687 Query 77644 AATCAAATCTTCCAT--CTATAA----CAAACATGTTCAAAGCTATAGATGCTAGATTAC 77697 | ||||| || | || || | |||||||| | ||| || || || | ||| | Sbjct 66686 AGTCAAAAGTTTTAGTACTGGAATTGACGAACATGTTAACAGCAATTGAAGCCAAATTGC 66627 Query 77698 AAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATT 77757 |||| || || |||| | | | |||||| || || || || || |||||||| |||| Sbjct 66626 AAACGGCCACTTCATCTGGACTAGAATATTGAATAATTTCAGTGCAGAGATTACTGCATT 66567 Query 77758 TGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCA-TGAGTCCTTATAAAGAATA 77816 | ||||| || | ||||||||| || ||| ||||||| ||| || || || || || Sbjct 66566 TTATAGTTCCAATATTTTGTTGATTTGATTTTCTATTGCAGTGA-TCTTTGTACAGCATG 66508 Query 77817 AACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTT 77876 | || ||||||||||||| ||||| | ||| | |||| | | | | ||||| Sbjct 66507 TAAGGGGTCCCGGTTTCAACTTGTGAAATCAAAATTGCAGTCCATAGGTCACGCGCTTTA 66448 Query 77877 ATCATAGATTTGTA-TCGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATC 77935 || | |||| | | |||| || |||| |||| ||||| || |||||||| || Sbjct 66447 ATTTGACGTTTGAATTTGCCT-TCCGTTTCGTATTTTGTATAGAGAACATCAAATTCTTC 66389 Query 77936 TCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATC 77995 ||||||||||||| | | || || |||| | || ||||| || | ||| || || Sbjct 66388 TCCCCAAACATCAGCAAGACCTGGAGATTCGTGAGGACACATTAAGGTCCACATTCCGTC 66329 Query 77996 TTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGT 78055 ||| | || ||||||||||| | ||| || ||||| ||| || ||||| || | | Sbjct 66328 GTCCATTACACGTTTCATAAATAAATCCGGAATCCAAAGACCATAAAATAATTCCCTCGC 66269 Query 78056 TCTATGTTCTTCATTTCCT 78074 | || ||| || |||||| Sbjct 66268 GCGATATTCCTCTTTTCCT 66250 Score = 176 bits (194), Expect = 6e-39 Identities = 210/285 (74%), Gaps = 0/285 (0%) Strand=Plus/Minus Query 77048 TGATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAG 77107 || ||||||| ||| || ||||| || | ||||| || || || |||||| || | | Sbjct 67438 TGCTATAATTTCATTTTTCATATCTTCGTCCCACAGATTTCTTTCAGTTAAATCTTTCAA 67379 Query 77108 GAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACT 77167 |||||||| ||||| |||||||||||||| || | || | | | ||||||||||| Sbjct 67378 AAGATGAGGGTTAACAATTTGAAATTCTCCCGAGAGAACGCGTCTTGAATAAATATTACT 67319 Query 77168 GGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCAT 77227 || || ||||| | ||||||||||| ||||||||||| ||||| ||||| |||||||| Sbjct 67318 TGTGTACGGTTCAATTGATTCATTGTTGCCCAAAATTTGTGCAGTTGAAGCTGTTGGCAT 67259 Query 77228 AGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTT 77287 || || | |||||| ||| | | ||||| ||| |||||| | |||| | || Sbjct 67258 TGGAGCTAACAATAACGAATTACGAACTCCATGAGTTGCGATTTTTGCCTTTAAAGCTTG 67199 Query 77288 CCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTG 77332 |||||||||||||| || || |||| ||| | || ||||| Sbjct 67198 CCAATCCCAAAGATTTGTTGGCGTTACATTCCACATGTCATATTG 67154 Score = 116 bits (128), Expect = 5e-21 Identities = 196/284 (69%), Gaps = 0/284 (0%) Strand=Plus/Minus Query 78072 CCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATAT 78131 || ||||| || || | ||||||||| || | ||| |||| |||||||||||| | ||| Sbjct 66170 CCAGTATTTTTCTTTAAATCGAGAAATTCGAAAATGTCAGCATGCCATGGTTCAATATAA 66111 Query 78132 ATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTA 78191 ||||| | |||| |||| ||| || || || ||||| | |||| ||||| ||||| Sbjct 66110 ATTGCAAATGCTCCCGGTCTTTTGTTTCCACCTTGATCAACGTATCGAGCGGTACTATTA 66051 Query 78192 TAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTT 78251 |||||||| | ||| |||| || ||| || ||| ||| | ||||| | || | || Sbjct 66050 TAAACTCTAATCATAGGAACAAGACCATTGGATTCTCCTTGAGTTCCTGCGATGCGAGTT 65991 Query 78252 CCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGA 78311 || | || | ||| | || | | || ||||| || || ||| || || Sbjct 65990 CCTTTGGCTCTGATACAATGAACGTTAACGCCAATTCCACCAGCGGATTTACTAATGAGT 65931 Query 78312 GCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATC 78355 || || ||| ||||| ||||| || || || |||||||| || Sbjct 65930 GCACATTTTTTTAATGTGTCGTATATGCCTTCAATACTGTCTTC 65887 Score = 98.7 bits (108), Expect = 1e-15 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 77379 CCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAA 77438 |||| | |||||| | ||||||||| || ||||||||||| ||||||| ||||| || Sbjct 67035 CCTTTTTCTTCAGCGATTTCACAACTAGCCTCCAATGCTCCATAATAAAGAGTTTCAAAT 66976 Query 77439 ATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTAAAAGAATAAAG 77498 || | |||| | | ||| ||||| ||| ||||| ||| | | | | | ||| Sbjct 66975 ATTTGGATATTTAACTTTTGAGCTTCTTCACTCTCAAATGGAAAGCGCATTAACAAAAAT 66916 Query 77499 GCATCTGCTAATCCCTGAACTCCAATACC 77527 ||||||||||||||||| | ||||||||| Sbjct 66915 GCATCTGCTAATCCCTGTATTCCAATACC 66887 Score = 86.0 bits (94), Expect = 9e-12 Identities = 109/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 78752 tttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATC 78811 |||||| |||||||| || ||||| || || || || || || |||| ||| |||||||| Sbjct 65307 TTTTTTAGTTTCCTTATGAAGATTTGAAACTGCAATCCTGGCTGCTAAAATTGCATAATC 65248 Query 78812 AGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCCGCTAAAATATCTAACTCTATAGT 78871 |||||||| || || || ||||| | || || || | | ||||||| || | ||| Sbjct 65247 AGGATGTTTGGTCGTCATTGTTGCTGCAGTCTCGGCAGCAAGATTATCTAATTCAACAGT 65188 Query 78872 TGTGACCCCATTATATAGTCCTTGAATAAC 78901 || || ||| || ||||| | ||| || Sbjct 65187 CGTTACTCCAGAGTAGAGTCCATTAATTAC 65158 >seq17032 Length=5332 Score = 98.7 bits (108), Expect = 1e-15 Identities = 98/127 (77%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 48627 TTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTC 48686 || |||| ||| ||||||||| | ||||||||||| |||||||||||||||||||| | | Sbjct 870 TTGGATAAATCAACTTCTTCAACAGTCCAAAATGAAGCCTCTGCTTTTTTATACATCTGC 929 Query 48687 CATATATCACTGTATTGGATTGGGAAAATAACAAATCTATTTGGATTTTTTGCAAGGATA 48746 || ||||| |||| || || || | |||||||| | ||||||| | || | | Sbjct 930 CAAATATCTGGCCATTGAATGGGAAATACAACAAATCGACGAGGATTTTCTTTGAGAAGA 989 Query 48747 GGTTCCA 48753 ||||||| Sbjct 990 GGTTCCA 996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694350989024000