Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptopilina_20clavipes_20[genbank_20GCA_5F001855655.1_202016-10-28] 36,600 sequences; 255,343,917 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq23413 122 6e-23 seq63 93.3 3e-14 >seq23413 Length=131177 Score = 122 bits (134), Expect = 6e-23 Identities = 157/212 (74%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGA--GTTGGCGCTCGTCGT 44186 |||| ||||| || ||| || || || ||||| |||| | ||| || |||| | Sbjct 117950 ACCAAATGAAGGGTCGACTCTTTCTGAATATTGTAGTCGGACAAAGTT--CGTCCGTCCT 118007 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 ||| || || || || |||||||||||||||||||||| ||| | || ||||| ||| Sbjct 118008 CCAATTGTTTTCCAGCGAAGATCAAACGCTGCTGATCTGGAGGAATTCCCTCCTTGTCCT 118067 Query 44247 TTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 || || ||||| | |||| | || || |||| || ||| ||||| | |||||||| Sbjct 118068 GGAT-TTTTGCTTTCACGTTCTCGATCGTATCGGAGGCTTCAACCTCTAATGTAATCGTT 118126 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| ||||| || |||||||| |||||||| Sbjct 118127 TTTCCAGTGAGAGTTTTCACGAAAATTTGCAT 118158 Score = 122 bits (134), Expect = 6e-23 Identities = 122/156 (78%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 44183 TCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTT 44242 || |||| |||||| ||||| |||||||||||||||||||||| ||| | || ||||| Sbjct 118232 TCCTCCAACTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGAGGAATTCCCTCCTTG 118291 Query 44243 TCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAAT 44301 ||| || || ||||| | |||| | || ||||||| || || || |||| || || Sbjct 118292 TCCTGGAT-TTTTGCTTTCACGTTCTCGATCGTGTCGGAGGCCTCAACTTCCAAGGTGAT 118350 Query 44302 CGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||| || ||||| || |||||||| |||||||| Sbjct 118351 CGTCTTCCCGGTGAGAGTTTTCACGAAAATTTGCAT 118386 Score = 107 bits (118), Expect = 1e-18 Identities = 173/244 (71%), Gaps = 6/244 (2%) Strand=Plus/Plus Query 44097 ATTTTTATTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGA 44156 |||||| | | |||| || | || | | ||| || || || || |||||| || | Sbjct 117690 ATTTTTCCTACTTTCCTCCGCGAAGACGAAGCACAAGATGGAGGGTCGACTCCTTCTGAA 117749 Query 44157 TGTTGTAATCGGCGAGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACG 44214 | || || || | ||| || || | || |||| |||||| ||||| ||||||||||| Sbjct 117750 TATTATAGTCTGAGAG--GGTTCTTCCATCCTCCAACTGCTTTCCGGCGAAGATCAAACG 117807 Query 44215 CTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGG 44273 |||||| |||| ||| | || ||||| ||| || || ||| | | |||| | || | Sbjct 117808 CTGCTGGTCTGGAGGAATTCCCTCCTTGTCCTGGAT-TTTTGCCTTCACGTTCTCGATCG 117866 Query 44274 TGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTT 44333 |||| | || ||||| |||| || || || ||||| || ||||| || ||||| |||| Sbjct 117867 TGTCAGAGGCCTCCACTTCCAATGTGATTGTTTTTCCAGTAAGGGTTTTTACGAAAATTT 117926 Query 44334 GCAT 44337 |||| Sbjct 117927 GCAT 117930 >seq63 Length=129227 Score = 93.3 bits (102), Expect = 3e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 |||||||| || |||||||| | | | || | || ||||| ||||| || |||||| Sbjct 61979 TCCTTTTGAATATTGTAATCAGACAATGTTCGTCCATCTTCCAGTTGCTTTCCAGCAAAG 61920 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 ||||| ||||| ||||||| || | ||||| || || || || ||||| || || Sbjct 61919 ATCAATCGCTGTTGATCTGGTGGGATTCCTTCTTTATCTTGGAT-TTTTGCTTTAACATT 61861 Query 44267 C-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | | || ||||| | | || ||||| | ||||||||||| ||||| | || || || Sbjct 61860 CTCGATCGTGTCAGAAGCCTCAACCTCAAGGGTAATCGTCTTCCCCGTCAAAGTTTTTAC 61801 Query 44326 GAAGATTTGCATG 44338 || || |||||| Sbjct 61800 AAAAATCTGCATG 61788 Score = 82.4 bits (90), Expect = 5e-11 Identities = 159/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| || || |||| | || | || | |||| || || || || |||||||| Sbjct 62475 CATTCCACCCCTGAGTCGAAGAACTAAATGTAACGTGGATTCTTTCTGAATATTGTAATC 62416 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | ||| ||| | || || | || || || || || ||||| | ||||||||||| Sbjct 62415 AGAGAGCGTGCGTCCATCTTCTAATTGTTTGCCAGCGAAAATCAATCTCTGCTGATCTGG 62356 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | || || || || || || |||| | ||| | || ||||||| | || Sbjct 62355 TGGAATTCCCTCTTTGTCTTGAATTTTG-GCTTTTACATTCTCGATTGTGTCGGAAGCTT 62297 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||||| ||||| || ||||| || | ||| || ||||| |||||||| Sbjct 62296 CCACCTCCAGGGTAATTGTTTTTCCGGTTAAGGTTTTGACGAAAATTTGCAT 62245 Score = 82.4 bits (90), Expect = 5e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 44110 TCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC 44169 ||| |||| ||||| || |||| ||||| ||| || ||||| || || ||||||| Sbjct 64582 TCCGCCTCGAAGTCTTAAAACCAAATGAAGAGTGGATTCTTTTTGAATATTATAATCGGA 64523 Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229 || || | || ||||| || || |||||||||||||| | || ||||||| || Sbjct 64522 TAGCGTTCGACCATCCTCCAGTTGTTTACCGGCAAAGATCAATCTTTGTTGATCTGGTGG 64463 Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCA 44288 | || | |||| | | | || || | | |||| | |||||||| | | ||| | Sbjct 64462 GATTCCCT-CTTTGTCTTGAATTTTAGCCTTGACGTTCTCGATGGTGTCAGAAGCTTCAA 64404 Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | |||| || || || || || || | || || ||||| |||||||| Sbjct 64403 CTTCCAAGGTGATAGTTTTACCAGTAAAAGTTTTAACGAAAATTTGCAT 64355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359829821782200