Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lerema_20accius_20[genbank_20GCA_5F001278395.1_202015-09-02] 29,977 sequences; 298,169,737 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq852 181 1e-40 seq6 149 6e-31 seq397 140 3e-28 seq87 132 5e-26 seq504 127 2e-24 seq27819 116 4e-21 >seq852 Length=562639 Score = 181 bits (200), Expect = 1e-40 Identities = 492/754 (65%), Gaps = 13/754 (2%) Strand=Plus/Plus Query 65270 GGCGCGTACAGCGCGGTCTGGTGGCCCAGCTCGGTGGTGGACCACGCCCCCTTGAAGTCG 65329 || |||||||| | |||||||| || || | | | |||||||| |||||||||||| Sbjct 33024 GGAGCGTACAGAGATGTCTGGTGACCTAGGGTGTCGTTCGACCACGCTCCCTTGAAGTCG 33083 Query 65330 TAGCTCATCAAAAAGATGCGGTCGAGCGAGCGGTGCGCGCGCCCGTAGTCCACGACGGCG 65389 ||| |||| || |||||| |||| | || || ||||| | |||||| || || Sbjct 33084 TAGTTCATGAAGAAGATGTGGTCCATGTAGTTCTGTGCGCGACTGTAGTCGACCACTTGA 33143 Query 65390 ATCTTGTCGTCGCCGGCGCCGATGGCGCTGGTCAGCTCGTACGTCCTGTTGGTCTCGGCC 65449 |||||||| || || | ||| || || ||||||||| || || || | | Sbjct 33144 ATCTTGTCCCAACCAGCACTGATAGCTGAAGTTAGCTCGTACTTCTTGCCAGTAGCAGAT 33203 Query 65450 TGCAGCTCGTCGAGCATGAGCNNNNNNNNNNNNNNNNNNNNCGCGTACGTTTCGCGGTCG 65509 | ||||| |||||| | | || ||||||| || Sbjct 33204 GATAACTCGTTGAGCATCTCACGAAGTTCTTTCATTAAGAGCACATAGGTTTCGCCATC- 33262 Query 65510 CGCTCCGCGTCGCCCAGCAGCGGGTTGGCGCCCTTGCCGCCCGGAAACTCCCAGTCCACG 65569 || | |||| || ||||| |||||||||||||| || || ||||| || | Sbjct 33263 --CTTAGGACCGCCGAGGTTAGGGTTAGCGCCCTTGCCGCCAGGGAATTCCCAATCGATA 33320 Query 65570 TCCAGGCCGTCGAACAGCTTCCACGTCTGCAGAAACTcgcgcgccgactcgacgaacgcg 65629 || | || || || | ||||||||| ||| || || | || | |||||| Sbjct 33321 TCGACACCATCAAAGAATTTCCACGTCATCAGGAATTCCTTAACTGAATTGACGAAA--- 33377 Query 65630 cggcgcgcgctcgcgTCGTGCATGTGATAA----AACGGATCGGACAGGGTCCAGCCGCC 65685 ||| | || | | || ||| | || || ||||| | || ||||| || || Sbjct 33378 CGGTCCCTCTTCACTTTGT-CATCAAAGAAGAAGAAAGGATCAGCAAGAGTCCAACCTCC 33436 Query 65686 GATGGAGGGCAGCACGCGCAGGTGCGGGTGCGCCTT-CTTGATGGCCATCAGCTGGCCGA 65744 || || ||||| | | || | ||| | ||| ||| | | |||||| || |||| Sbjct 33437 AATAGACGGCAGGATTTTTAAGT-CAGGTCTGGCTTGCTTCAATGACATCAGTTGACCGA 33495 Query 65745 AGTTGCCCTTGTACGGCTCGCTCCACGCGGTCACGCCCTTTTGCGGCTTCTGCACGGCCG 65804 ||||||||||||| || || |||| | | | |||||||| || ||||| | || | Sbjct 33496 AGTTGCCCTTGTAAGGTTCATTCCAAGATGATAATCCCTTTTGTGGTTTCTGGAGAGCGG 33555 Query 65805 CCCACGGGTCGTGCACCGCCAGCTTGAAGTCGTCGCGGCCCGCGCACGAGCGCTGCAGCG 65864 |||| || ||||| | | || ||||||||| || || || ||| || || |||| | Sbjct 33556 CCCATGGATCGTGGATGGACACCTTGAAGTCTTCTCGACCGCTGCAAGACCGTTGCAAAG 33615 Query 65865 CCTCGAAGCTGCCCGCGATGGACTTGAGGCTGTCGTTGATGCCGTCCCCGCCGCACATCG 65924 | | ||| ||||| |||| ||| | |||||||||||||| || || || || || | Sbjct 33616 CTTGGAAACTGCCTTCGATTTCCTTCAAACTGTCGTTGATGCCATCTCCCCCACAAATTG 33675 Query 65925 GCACGAAGCCGTACAGCAGATGCGTGAGGTTGGGCACGGGCACCTTGTCGGCGGGAAAGT 65984 | | ||| ||||| | |||||||||||||| || | || | ||||| | || || | Sbjct 33676 GGATGAACCCGTATAAAAGATGCGTGAGGTTTGGAATTGGAATTTTGTCCACAGGGAACT 33735 Query 65985 CGCGCCCGTACACGCCCCACTCGACGAAGTAGGC 66018 || ||||| ||||| || ||||||||||| Sbjct 33736 TCCGGGGATACACACCCCATTCTACGAAGTAGGC 33769 >seq6 Length=1691400 Score = 149 bits (164), Expect = 6e-31 Identities = 165/220 (75%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 116948 TTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGG 117007 || || ||| | || || |||||||||| || ||||||| || ||||| |||| ||| Sbjct 1115370 TTCAATGCCGTTGAAACCCTGCCGTGCGTGAAGAAGAAGGCAGACTGGGCCCTGCAGTGG 1115311 Query 117008 ATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGC 117067 || ||| ||| || | |||||||||||| | || || || || || || |||||| Sbjct 1115310 ATAGCCAGCAAGTCTGCAACATTCGGCGAGCGCATTGTCGCATTTGCTGCTGTAGAGGGC 1115251 Query 117068 GTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCC 117127 |||| || || |||||||| || | ||||||||||| |||||||| || |||||||| Sbjct 1115250 ATCTTTTTCTCTGGCAGTTTTGCGTCAATATTTTGGCTGAAGAAACGTGGTCTCATGCCT 1115191 Query 117128 GGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGG 117167 || ||||||||||||| || | || || |||| |||| Sbjct 1115190 GGATTGACTTTCAGCAATGAATTGATTTCTCGGGATGAGG 1115151 Score = 147 bits (162), Expect = 2e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 116711 GACTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTC 116770 || ||||| ||||||| ||| ||| | || ||||||||||| || ||||||| || Sbjct 1115968 GATTGGGACAGCTTGAAAGACTGTGAGAGGCACTTCATCAAGCATGTATTGGCCTTCTTT 1115909 Query 116771 GCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAG 116830 || || |||||||| || || |||||||| || ||||| ||| ||||||| ||||| Sbjct 1115908 GCTGCATCAGACGGCATTGTAAATGAGAATCTAGTTGAGCGCTTCTCTCAGGAAGTGCAA 1115849 Query 116831 GTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAA 116890 || | || ||| | || |||||||| || || || ||||||||||| || || || ||| Sbjct 1115848 GTAACTGAAGCGAGATGTTTCTACGGTTTCCAAATTGCCATGGAGAATGTCCATTCTGAA 1115789 Query 116891 ATGTATTCGACCCTCATCGACACGTA 116916 |||||||| ||||| ||||| || Sbjct 1115788 ATGTATTCCCTGCTCATTGACACATA 1115763 Score = 125 bits (138), Expect = 7e-24 Identities = 104/127 (82%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 |||||||| || ||||| || || ||||| ||||| || |||||||| || || |||||| Sbjct 1116496 GAGCCGCTTCTCCGCGACAATCCACGCCGTTTCGTCATCTTCCCCATTCAGTATCCGGAC 1116437 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||||||||||||||| ||||| ||||| ||||| || || ||| | Sbjct 1116436 ATCTGGCAAATGTACAAAAAGGCCGAGGCTTCGTTTTGGACTGTCGAAGAAGTTGACTTA 1116377 Query 116696 TCCAAGG 116702 || |||| Sbjct 1116376 TCTAAGG 1116370 Score = 118 bits (130), Expect = 1e-21 Identities = 137/185 (74%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 117179 GACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCGCGCGTCAGG 117238 ||||| |||||| | |||||||||| |||| ||| |||||| ||||| || Sbjct 1114662 GACTTCGCCTGTCTAATGTTCAAGCACCTGGTCCAGAAGCCGAGCAAGGCGCTGGTGCTA 1114603 Query 117239 GAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTGCCGGTG 117298 ||||| ||| |||||||| |||||||||||| |||||||| || |||||||| ||| Sbjct 1114602 CAGATCATCAAGGACGCGGTGGCCATCGAGCAGGAGTTCCTCACGGACGCGCTGCCCGTG 1114543 Query 117299 CGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTTCGTCGCCGACAGG 117358 || ||||| || | || ||||| ||||| | ||||| || || || || ||||| Sbjct 1114542 CGCCTGCTCGGCATGAACTGCGACCTCATGTCTGAGTACATTGAATTTGTGGCGGACAGA 1114483 Query 117359 CTGCT 117363 ||||| Sbjct 1114482 CTGCT 1114478 >seq397 Length=962699 Score = 140 bits (154), Expect = 3e-28 Identities = 160/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || ||||| || || || |||||||||||| | || || ||| | | Sbjct 56841 ATGCAGATCTTTGTTAAAACCCTGACTGGTAAAACCATCACCTTGGAGGTGGAACCTTCT 56782 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | ||| | |||| || |||| |||||||| ||||| ||| | |||||| Sbjct 56781 GACACCATTGAAAATGTGAAGGCCAAGATTCAGGACAAAGAAGGCATTCCCCCAGACCAG 56722 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| |||||| ||||| ||||| || | ||||| | |||||| ||| Sbjct 56721 CAGCGTCTTATCTTCGCGGGTAAACAACTGGAAGATGGTCGCACTTTGTCCGACTATAAC 56662 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||||| ||| |||| || ||||| ||| |||| Sbjct 56661 ATCCAGAAAGAGTCCACCCTTCATCTGGTGCTGCG 56627 Score = 136 bits (150), Expect = 4e-27 Identities = 159/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || ||||| || || || |||||||||||| | || || ||| | | Sbjct 57525 ATGCAGATCTTTGTTAAAACCCTGACCGGTAAAACCATCACCTTGGAAGTGGAACCTTCT 57466 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | ||| | |||| || |||| |||||||| ||||| ||| | || ||| Sbjct 57465 GACACCATTGAAAATGTGAAGGCCAAGATTCAGGACAAAGAAGGCATTCCCCCAGATCAG 57406 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || ||||| |||| ||| || ||||| || || || | |||||| | |||||| ||| Sbjct 57405 CAGCGACTTATCTTCGCTGGTAAACAACTAGAAGATGGGCGCACATTGTCCGACTATAAC 57346 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||||| ||| |||| || ||||| || ||||| Sbjct 57345 ATCCAGAAAGAGTCCACCCTTCATCTGGTATTGCG 57311 Score = 127 bits (140), Expect = 2e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || ||||| || || || |||||||| ||| | || || ||| | || Sbjct 57297 ATGCAGATCTTTGTTAAAACCCTGACTGGTAAAACCATAACCTTAGAGGTGGAACCTTCC 57238 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | ||| | |||| || || | ||||| |||||||| ||| | || ||| Sbjct 57237 GACACTATCGAAAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAG 57178 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| |||||| ||||| |||| || | ||||| | |||||| ||| Sbjct 57177 CAGCGTCTTATCTTCGCGGGTAAACAATTGGAAGATGGTCGCACTTTGTCCGACTATAAC 57118 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||||| ||| |||| || ||||| |||||||| Sbjct 57117 ATCCAGAAAGAGTCCACCCTTCATCTGGTGTTGCG 57083 Score = 122 bits (134), Expect = 9e-23 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || ||||| || || || |||||||||||| | || || || | | Sbjct 57753 ATGCAGATCTTTGTTAAAACCCTGACCGGTAAAACCATCACCTTGGAGGTGGAGCCTTCT 57694 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | ||| | |||| || || | ||||| || ||||| ||| | |||||| Sbjct 57693 GACACCATCGAAAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAG 57634 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| |||||| ||||| ||||| || | ||||| | ||||| ||| Sbjct 57633 CAGCGTCTTATCTTCGCGGGTAAACAACTGGAAGATGGTCGCACTTTGTCTGACTATAAC 57574 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||||| ||| |||| || ||||| ||| |||| Sbjct 57573 ATCCAGAAAGAGTCCACCCTTCATCTGGTGCTGCG 57539 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| ||||| || ||||| || || || |||||||| ||| | || || ||| | || Sbjct 56613 ATGCAGATATTTGTTAAAACCCTGACCGGTAAAACCATAACCTTGGAGGTGGAACCTTCC 56554 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | ||| | |||| || || | ||||| || ||||| || | |||||| Sbjct 56553 GACACCATCGAAAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCAGACCAG 56494 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || | || | ||||| ||||| ||||| || | ||||| || |||||||||| Sbjct 56493 CAGAGATTGATTTTTGCGGGTAAACAACTGGAAGATGGTCGCACTCTGTCCGACTACAAC 56434 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||| |||||| |||| || || | || ||||| Sbjct 56433 ATCCAAAAGGAGTCCACTCTCCACTTGGTTTTGCG 56399 Score = 109 bits (120), Expect = 6e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || ||||| || || || |||||||||||| | || || ||| | || Sbjct 57069 ATGCAGATCTTTGTTAAAACCCTGACTGGTAAAACCATCACCTTGGAGGTGGAACCTTCC 57010 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | ||| | |||| || || | ||||| || ||||| || | |||||| Sbjct 57009 GACACCATCGAAAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCAGACCAG 56950 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || | || | || || |||||| |||| || | ||||| | ||||| ||| Sbjct 56949 CAGAGATTGATTTTTGCAGGTAAACAGTTGGAAGATGGTCGCACTTTGTCTGACTATAAC 56890 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||||| || |||| || ||||| |||||||| Sbjct 56889 ATCCAGAAAGAATCCACCCTTCATCTGGTGTTGCG 56855 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| ||||| || |||||||| || |||| || || | | Sbjct 58209 ATGCAGATTTTCGTTAAAACTCTCACCGGTAAAACCATTACTCTCGAGGTGGAGCCTTCT 58150 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | ||| | || | ||||||| ||||||||||| || || | ||||| Sbjct 58149 GACACCATAGAAAATGTAAAAGCTAAAATTCAAGACAAAGAGGGTATTCCACCAGACCAA 58090 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||| |||| || | || || || || |||| || | |||||| | ||||||||| Sbjct 58089 CAAAGACTGATATTTGCTGGTAAGCAATTGGAAGATGGGCGCACTTTGTCAGACTACAAC 58030 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||||| || | || || ||| |||| || || Sbjct 58029 ATCCAGAAAGAATCTACTCTTCATTTAGTATTACG 57995 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||||||||| ||||| || ||||| || ||| | || || || | | Sbjct 58437 ATGCAGATCTTCGTAAAAACCCTCACTGGTAAAACTATTACCCTTGAGGTGGAGCCGTCT 58378 Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | ||||| | |||| || |||| ||||| || || || ||| | || || Sbjct 58377 GATACCATCGAAAACG-TGAAGGCTAAGATTCAAGACAAGGAAGGTATTCCCCCAGATCA 58319 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| || |||| ||| || || ||||| || |||| || || || |||||||| Sbjct 58318 GCAACGCCTGATCTTCGCAGGAAAGCAGCTCGAAGACGGACGTACACTTTCAGACTACAA 58259 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 || || || || | || || || || || Sbjct 58258 TATTCAAAAAGAATCTACACTTCACCTTGT 58229 Score = 91.5 bits (100), Expect = 2e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || ||||| || | || |||||||| || ||| | || || || | | Sbjct 57981 ATGCAGATCTTTGTAAAGACTTTAACTGGCAAAACAATAACCTTAGAAGTTGAGTCATCG 57922 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | |||| || || | |||||||| ||||| || | || ||| Sbjct 57921 GATACTATTGAGAATGTGAAGGCCAAGATCCAGGACAAAGAAGGCATTCCTCCAGATCAG 57862 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || | || | ||| || |||||| |||| || | ||||| | ||||| ||| Sbjct 57861 CAGAGATTGATTTTCGCAGGTAAACAGTTGGAAGATGGTCGCACTTTGTCTGACTATAAC 57802 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||||||||| |||| || ||||||||| |||| Sbjct 57801 ATCCAGAAGGAGTCCACCCTTCATCTAGTGCTGCG 57767 >seq87 Length=431742 Score = 132 bits (146), Expect = 5e-26 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 ||||||||||| ||||| || || || ||||| || || |||||| |||| || || ||| Sbjct 313406 AAAATGCAAATCTTCGTGAAGACCCTAACGGGAAAGACAATCACCCTCGAGGTGGAGGCC 313465 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | |||| | | | | | |||| || || | |||||||||||||| || | ||| Sbjct 313466 TCTGACACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAAGAGGGCATTCCTCCCGAC 313525 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| || || |||| ||| ||||| |||||||| || | ||||| || |||||| Sbjct 313526 CAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGTCGCACTCTTTCTGACTAC 313585 Query 40867 AACATCCAGAAGGAGGCCACGCTGCA 40892 ||||| ||||||||| | || || || Sbjct 313586 AACATTCAGAAGGAGTCGACTCTCCA 313611 >seq504 Length=80497 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || || || || || ||||| ||||| || || || | || || || |||| Sbjct 72888 AATGCAGATCTTTGTCAAGACACTCACTGGCAAGACTATTACACTGGAAGTTGA-GCCAT 72946 Query 40749 C-GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 | |||| | | | |||| | ||||||| ||||| ||||| || ||| | |||| Sbjct 72947 CTGACACTATTGAGAATGTCAAAGCCAAAATTCAGGACAAGGAGGGAATTCCCCCTGACC 73006 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 | || || || |||| |||||| ||||| ||||| || | || || || ||||||| Sbjct 73007 AACAGCGTCTTATCTTCGCGGGTAAACAACTGGAAGATGGCCGTACACTGTCGGACTACA 73066 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||| |||| |||||| |||||||| | ||||| || || Sbjct 73067 ACATCCAGAAGGAATCCACTCTGCATTTAGTGTTGAGATTGAGAGGAGG 73115 Score = 125 bits (138), Expect = 7e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || ||||| || || |||||||| | || || || |||| | Sbjct 73896 ATGCAGATCTTTGTGAAGACACTCACCGGAAAGACCATCACATTGGAGGTTGA-GCCATC 73954 Query 40750 -GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | ||| | |||| ||||||| ||||||||||| || ||| | ||||| Sbjct 73955 TGACACTATTGAAAATGTGAAGGCCAAAATTCAAGACAAAGAGGGGATTCCCCCTGACCA 74014 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||||| || |||| || ||||| || |||| |||| || || || |||||||| Sbjct 74015 ACAACGTCTTATCTTTGCCGGCAAGCAATTGGAAGACGGCCGTACACTGTCGGACTACAA 74074 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||| || |||| |||||| |||| ||| | ||||| || || Sbjct 74075 CATCCAGAAAGAATCCACTCTGCATTTAGTATTGAGATTGAGAGGAGG 74122 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCA-C 40748 ||||| || || || || || ||||| ||||| || || || | || || || |||| | Sbjct 72433 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACTATTACACTGGAAGTTGA-GCCATC 72491 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 ||||| | | | |||| | ||||||| ||||| || || || ||| | ||||| Sbjct 72492 CGACACTATCGAGAATGTCAAAGCCAAAATTCAGGACAAGGAAGGAATTCCCCCTGACCA 72551 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| ||| || ||||| ||||| || | ||||| ||| ||||||||| Sbjct 72552 GCAGCGTCTTATCTTCGCCGGTAAACAACTGGAAGATGGACGCACTCTCTCCGACTACAA 72611 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||| |||| || ||| |||| | || |||| || || Sbjct 72612 TATCCAGAAGGAATCCACTCTTCATTTAGTACTTCGTCTGAGAGGAGG 72659 Score = 105 bits (116), Expect = 7e-18 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || ||||| ||||| || || || | || || || |||| | Sbjct 72661 ATGCAGATCTTTGTGAAGACACTCACTGGCAAGACTATTACATTAGAAGTTGA-GCCATC 72719 Query 40750 G---ACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | ||| || ||| | | || | ||||||| ||||||||||| || || | ||| Sbjct 72720 GGATACAAT-TGAAAATG-TGAAAGCTAAAATTCAGGACAAAGAGGGGATTCCTCCTGAC 72777 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 || ||||| || |||| || ||||| || |||| || | || || || |||||| Sbjct 72778 CAACAACGTCTTATCTTTGCCGGCAAGCAATTGGAAGATGGCCGTACACTGTCAGACTAC 72837 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||| ||||| || |||| |||||| |||||||| | ||||| || || Sbjct 72838 AACATTCAGAAAGAATCCACTCTGCATTTAGTGTTGAGATTGAGAGGAGG 72887 Score = 105 bits (116), Expect = 7e-18 Identities = 154/213 (72%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || || || || || ||||| ||||| || || || | || || || |||| Sbjct 73116 AATGCAGATCTTTGTCAAGACACTCACTGGCAAGACTATTACACTGGAAGTTGA-GCCAT 73174 Query 40749 CG---ACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 || ||| || || | | ||| |||| ||| |||||||| ||||| || | || Sbjct 73175 CGGATACAAT-TGAGAATGTTAAAGCCAAAA-TTCAAGACAAAGAAGGCATTCCTCCTGA 73232 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 ||| ||||| || |||| || ||||| ||||| || || | ||||| ||| |||||| Sbjct 73233 CCAACAACGTCTTATCTTTGCTGGCAAGCAGCTTGAAGATGGACGCACTCTCTCCGACTA 73292 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||||| | || || ||| |||| Sbjct 73293 CAACATCCAGAAGGAATCGACTCTTCATTTAGT 73325 Score = 100 bits (110), Expect = 3e-16 Identities = 94/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 40774 AAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAA 40833 ||||| | ||||||||||| || || | ||||| || ||||| || | || ||||| Sbjct 74208 AAAATCCAAGACAAAGAGGGGATTCCTCCTGACCAACAGCGACTTATTTTTGCCGGCAAG 74267 Query 40834 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCAT 40893 ||||| || || | ||||||||| ||||||||||||||||||||| |||| |||||| Sbjct 74268 CAGCTTGAAGATGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAATCCACTCTGCAT 74327 Score = 82.4 bits (90), Expect = 8e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || ||||| || || |||||||| | || || || |||| | Sbjct 73345 ATGCAGATCTTTGTGAAGACCCTCACCGGAAAGACCATCACATTGGAGGTTGA-GCCATC 73403 Query 40750 -GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | | |||| || || | ||||| ||||| || ||| | ||||| Sbjct 73404 TGACACTATCGAGAATGTGAAGGCCAAGATCCAAGACAAGGAGGGGATTCCCCCTGACCA 73463 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||||| | || | || ||||| || |||| || | ||||||||| |||||||| Sbjct 73464 ACAACGGTTAATATTTGCTGGCAAGCAATTGGAAGATGGCCGCACCCTCTCTGACTACAA 73523 Query 40869 CATCCAGAAGGA 40880 ||| |||||||| Sbjct 73524 CATTCAGAAGGA 73535 >seq27819 Length=1354 Score = 116 bits (128), Expect = 4e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || ||||| ||||| || || |||||||| | || || ||| | | Sbjct 1087 ATGCAGATCTTTGTCAAAACCCTCACCGGGAAGACCATCACTTTGGAAGTTGAACCATCT 1146 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | |||| | ||||||| ||||||||||| || ||| | ||||| Sbjct 1147 GACACTATCGAGAATGTCAAAGCCAAAATTCAGGACAAAGAGGGGATTCCCCCTGACCAA 1206 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| || |||| || ||||| || |||| || | || || || ||||||||| Sbjct 1207 CAACGTCTTATCTTTGCCGGCAAGCAATTGGAAGATGGCCGTACACTGTCGGACTACAAC 1266 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTT 40901 ||||||||||| |||| |||||| |||| || Sbjct 1267 ATCCAGAAGGAATCCACTCTGCATTTAGTATT 1298 Score = 102 bits (112), Expect = 8e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| || || || | || || || |||| | Sbjct 403 ATGCAGATCTTCGTTAAGACCCTTACTGGCAAGACTATTACATTAGAAGTTGA-GCCATC 461 Query 40750 G-ACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 | ||| | ||| | || | ||||||| ||||| || || || ||| | ||||| Sbjct 462 GGACACAATTGAAAATGTGAAAGCTAAAATTCAGGACAAGGAAGGAATTCCCCCTGACCA 521 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || || |||| || ||||| || |||| || | ||||||||| ||||||||| Sbjct 522 ACAGCGTCTTATCTTTGCTGGCAAGCAATTGGAAGATGGCCGCACCCTCTCCGACTACAA 581 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| | || || ||| |||| Sbjct 582 CATCCAGAAGGAATCAACACTTCATTTAGT 611 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || ||||| ||||| |||||||| | || || || |||| | Sbjct 631 ATGCAGATCTTTGTGAAGACACTCACTGGCAAGACCATCACATTAGAAGTTGA-GCCATC 689 Query 40750 -GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | | |||| ||||| | ||||||||||| || || | ||||| Sbjct 690 AGACACAATTGAGAATGTAAAGGCTAAAATCCAAGACAAAGAGGGGATTCCTCCTGACCA 749 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || ||||| || | || ||||| || | || || | ||||| || ||||||||| Sbjct 750 ACAGCGACTTATTTTTGCCGGCAAGCAATTAGAAGATGGACGCACTCTTTCCGACTACAA 809 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||| |||||||| |||| || ||| |||| ||| | ||| | || || Sbjct 810 CATTCAGAAGGAATCCACTCTTCATTTAGTATTGAGATTGCGAGGAGG 857 Score = 96.9 bits (106), Expect = 4e-15 Identities = 112/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 40766 TCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACG 40825 |||| | ||||||| ||||| ||||| || ||| | |||||||| || || |||| | Sbjct 23 TCAAAGCCAAAATTCAGGACAAGGAGGGAATTCCCCCTGACCAGCAGCGTCTTATCTTTG 82 Query 40826 CGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCA 40885 | ||||| || | || || | ||||||||| |||||||||||||||||||| | | Sbjct 83 CCGGCAAGCAATTAGAAGATGGCCGCACCCTCTCGGACTACAACATCCAGAAGGAATCAA 142 Query 40886 CGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 | || ||| |||| ||| | ||| | || || Sbjct 143 CTCTTCATTTAGTATTGAGATTGCGAGGAGG 173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515026140925520