Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lerema_20accius_20[genbank_20GCA_5F001278395.1_202015-09-02] 29,977 sequences; 298,169,737 total letters Query= NC_003038.1 Length=212482 Score E Sequences producing significant alignments: (Bits) Value seq826 100 4e-16 >seq826 Length=185846 Score = 100 bits (110), Expect = 4e-16 Identities = 123/168 (73%), Gaps = 15/168 (9%) Strand=Plus/Plus Query 104574 TAAAATGGCACTTCCTCCTTGTCATTGTATAGCACATTTTGATGTAAGTTCAAAAATAAA 104633 ||||||||| || || |||||||||||| | || || ||| ||||| |||| Sbjct 159283 TAAAATGGCTCTCCCACCTTGTCATTGTCTGGCTCAGTTTCATGTA---TCAA------- 159332 Query 104634 TGGTAAAAGAGAATTGTCTTGTCATTTATTTCAAAGATCTGCAGATATGGGGTTGGGAGT 104693 || ||| ||| || |||| ||||| |||||| ||| |||||||| ||||||| Sbjct 159333 --GTGGAAG---ATTATCATGTCTTTTATACCAAAGAAGTGCTGATATGGGTCTGGGAGT 159387 Query 104694 TCCTTTTAACATAGCAAGTTATGCATTATTAACACATATAATAGCTCA 104741 ||| || ||||| || |||||| | || ||||| ||||| || ||||| Sbjct 159388 TCCATTCAACATTGCCAGTTATTCCTTGTTAACTCATATGATTGCTCA 159435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 679559665046640