Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lerema_20accius_20[genbank_20GCA_5F001278395.1_202015-09-02] 29,977 sequences; 298,169,737 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq28624 646 0.0 seq6 140 3e-28 seq504 132 4e-26 seq397 131 1e-25 seq852 125 6e-24 seq27819 120 3e-22 seq87 109 5e-19 >seq28624 Length=432676 Score = 646 bits (716), Expect = 0.0 Identities = 1209/1772 (68%), Gaps = 15/1772 (1%) Strand=Plus/Minus Query 22106 TTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCC 22165 || || || || || || |||||||||||||| ||||| || || | ||||||||| || Sbjct 59691 TTATCTACAGTGAATTGAATGGCGTTTGCGGCGGGTTTCGTCCGCAAATAATACATTCCA 59632 Query 22166 GTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGGC 22225 || |||| |||||||||||| |||| ||||| || || |||||||| || ||| | ||| Sbjct 59631 GTTTTCAAACCCATCTTCCAAGCGTGGAAATGAATTGATGTCAATTTACCGTAATTTGGC 59572 Query 22226 AAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCC 22285 | | || | || ||||| || || ||||||||||| || |||| || || ||| Sbjct 59571 TCAGCAACGTGAATGTTAAACGATTGGCTTTGATCGATAAAAGCACCTCTGTCTGCAGCC 59512 Query 22286 ATATTTATCAATGTACGCATCGAC----ATTTCCCATACGGTCTTGTACAGTTGCCTGAT 22341 || | || |||| | | ||| || |||||||| || ||||| || | |||||| Sbjct 59511 ATCTGAAT---TGTA-GTTTTGACTGATATCTCCCATACTGTTTTGTATAGCTCCCTGAT 59456 Query 22342 CTCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTT 22401 ||| |||||| ||| || | || | ||| || |||||||| || || | ||| || Sbjct 59455 ATCTTTCGGTATACTTTCAATATTTTGAATGGAGCCATTATTGTGAATTATAAGATTCTT 59396 Query 22402 AATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCAC 22461 || || | ||||| || ||||||||| | ||||| | || || || Sbjct 59395 CATATCGTCATCCCACAGCTCGGCCTGTGTCAAATCTCGAAGAAGATGGTGATTTACGAC 59336 Query 22462 TTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGA 22521 || || ||||| || || || | ||| || || || || || |||||||| || || || Sbjct 59335 CTGGAATTCGCCAGATAAAACTCTGCGCTGATATATATTTGAAGTGAACGGCTCAAAGGA 59276 Query 22522 TTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGA 22581 |||||||| || || || || || || ||||| || ||||| || || | | ||||| Sbjct 59275 CTCATTGTTACCAAGAATTTGTGCAGTAGAAGCTGTAGGCATTGGAGCTAGTAACAGCGA 59216 Query 22582 GTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGA 22641 ||||| || ||||| |||| ||||| ||||| | | ||||| ||| || || | Sbjct 59215 ATTTCTTAAACCGTGTTTTGCTATTTTTTCTTTGAGAGTTGTCCAGTTCCATAGGTCCGT 59156 Query 22642 CGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTTC 22701 ||||| || ||||||||||| |||||||| | || ||| || ||||| ||||| Sbjct 59155 TGGCGTT---TTCTCCCACATATCATATTGCAAAATACCCTTACTTGCAGGGCTACCTTC 59099 Query 22702 GTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTA 22761 || | ||| || |||||| | | || | ||| ||||| || || || || || || Sbjct 59098 ATATGAACTGTATGGGCCATATTTTTCAGCTAATTCACAGCTTGCTTCTAATGCTCCATA 59039 Query 22762 ATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGCTTTCGTACGGCAT 22821 ||| |||||||| || |||| | ||| | || | || | ||||| ||||| || Sbjct 59038 ATAAATAGTCTCAAAAATTTGTTGGTTAAGTTTGATAGCTTTTTCACTTTCATACGGTAT 58979 Query 22822 ACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTTTT 22881 | ||| || || || || || || | || ||||| || ||||| || |||| | | | Sbjct 58978 TCTCATTATAACAAAAGCATCAGCTAATCCTTGAACACCAATACCAATAGGTCTATGTCT 58919 Query 22882 CAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTCAA 22941 || ||| || |||||| || || | ||| || |||| || || || | ||||| Sbjct 58918 CATATTGGAATTTTTTGCTTCAGGGACAGGGTAATAATTAACTTCAATGATTTTATTCAA 58859 Query 22942 GTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCCCGATTG 23001 ||| || | || || || | ||||||| ||| || Sbjct 58858 ATTTTGTGTGATGATCTTGGTGACTTCTTTCAATTTTTCAAAGTTATAAGATTTGTCTTC 58799 Query 23002 TACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGA 23061 || ||| | || | || || || || | |||||| || || || || || Sbjct 58798 GTTTACGAACATATTTAAAGCAATAGATGCTAAATTGCACACTGCTACTTCATCAGAATC 58739 Query 23062 CGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTG 23121 ||||| ||||||||||| ||||| |||||||| || || || ||||| ||||| || Sbjct 58738 AGTGTATTCTACAATTTCCGTACAGAGATTGCTGCATTTAATAGTGCCTAAATTTTGTTG 58679 Query 23122 GTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTG 23181 |||||| |||| ||||| || || ||||| ||||| | || ||||| || || || || Sbjct 58678 GTTGCTCTTTCTGTTGCAAGAGTCTTTGTAAAGCATAAATGGTGTGCCAGTTTCCACTTG 58619 Query 23182 CGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGTACCTGCCTTC 23241 | || | || ||| ||||| | | ||||| ||| | || | || ||| Sbjct 58618 TGCTTCAACAATAGCTTTCCACAAAATTTGAGCCCTAACTTGCTTGACAAATCTCTTTTC 58559 Query 23242 TTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGG 23301 ||| || || |||| || | | |||||||| | || ||||||| || || ||||| Sbjct 58558 TTCTTCATATTTTTCATAAAGCTTCTCAAATTCTTCCCCCCAACAGTCTGCAAGACCGGG 58499 Query 23302 CGATTGCATC-GGACACATGAGACTCCACAT-TGAGTCATTTTCAACGCGTCTCATAAAA 23359 | | ||| ||||||||||| ||||| | | | || |||||||| | | |||| || Sbjct 58498 ACAGT-CATGTGGACACATGAGGCTCCAATTCTCATTC-TTTTCAACTCTTTTCATGAAC 58441 Query 23360 AGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTG 23419 || || || ||||| ||||| || |||||||| | ||| || || || || || || ||| Sbjct 58440 AGGTCTGGGATCCAGAGAGCATAAAACAGTTCTCTGGCACGTACTTCTTCCTTACCAGTG 58381 Query 23420 TTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCA 23479 |||||||| ||||||||||| || || || || || ||||| || || ||||| | |||| Sbjct 58380 TTCTTTTTTAAATCCAAAAATTCGAATACATCAGCGTGCCAGGGTTCTAGGTAGATGGCA 58321 Query 23480 AACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACT 23539 || || || || | |||||||| |||||||| || || | || ||||| |||||||| Sbjct 58320 AAAGCTCCAGGACGTTTATTGCCACCCTGATCAACATATCTTGCTGTGTTATTGTACACC 58261 Query 23540 CTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTT 23599 | | ||| || || ||||| || || | || | || || | | |||||| Sbjct 58260 CGCAACATGGGAACAAGACCATTAGAAACACCATTTGTTCCAGCAATGTAAGTACCTTTA 58201 Query 23600 GCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCAT 23659 |||| | | || || || | ||||||||||| | || || || |||| || ||| Sbjct 58200 GCTCTTATGCAATGGACATGAAGTCCTATGCCTCCAGCAGACTTAGAAATCAATGCACAT 58141 Query 23660 TGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACAC 23719 || |||| ||||| ||||| || || || || || ||||| | || | ||||||||| Sbjct 58140 TGCTTCAATGTGTCATAGATACCTTCAATACTATCATCTTTCATAGCAATCAAGAAACAA 58081 Query 23720 GAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAG 23779 || || | ||| | | || ||||| || || || ||||| || |||||||| || ||| Sbjct 58080 GAGGATAGTTGTGGTCGTGGAGTAGCAGCAGAAAAAAGTGTAGGACTGGCGTGTGTGAAG 58021 Query 23780 TATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATA 23839 ||| | || | || ||||| || | || || |||||||| || ||||| || || Sbjct 58020 TATTTTTCTGATAATAAGTTGTATGTATTAATTGCTGCATCAATATCTTCTCCATGAATT 57961 Query 23840 CCGATGGCGACGCGCATCATCATGTATTGAGG 23871 || || | || ||||| | ||||| ||| || Sbjct 57960 CCAATAGAAACTCGCATAAGCATGTGTTGGGG 57929 >seq6 Length=1691400 Score = 140 bits (154), Expect = 3e-28 Identities = 161/217 (74%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 57634 AGGATCTGAGCGATTGGGATTCCCTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGT 57693 |||| ||| |||||||| | | ||||| | |||||| | || || || || || | Sbjct 1115979 AGGACCTGTCAGATTGGGACAGCTTGAAAGACTGTGAGAGGCACTTCATCAAGCATGTAT 1115920 Query 57694 TGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCAC 57753 |||| || || || ||||| || || ||||| || |||||| | || || | || || | Sbjct 1115919 TGGCCTTCTTTGCTGCATCAGACGGCATTGTAAATGAGAATCTAGTTGAGCGCTTCTCTC 1115860 Query 57754 AAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACG 57813 | ||||||||||| || || |||||||| || ||||| || ||| | ||||| || || | Sbjct 1115859 AGGAAGTGCAAGTAACTGAAGCGAGATGTTTCTACGGTTTCCAAATTGCCATGGAGAATG 1115800 Query 57814 TGCATTCAGAAATGTATTCGCTACTCATCGATACGTA 57850 | ||||| ||||||||||| || ||||| || || || Sbjct 1115799 TCCATTCTGAAATGTATTCCCTGCTCATTGACACATA 1115763 Score = 107 bits (118), Expect = 2e-18 Identities = 136/187 (73%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 57915 AAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGG 57974 ||||||||||| ||| | | | |||||| ||| | || || |||| |||| | Sbjct 1115337 AAGAAGGCAGACTGGGCCCTGCAGTGGATAGCCAGCAAGTCTGCAACATTCGGCGAGCGC 1115278 Query 57975 CTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTT 58034 | |||| || || || || || || || || || || ||||| |||||| |||||||| Sbjct 1115277 ATTGTCGCATTTGCTGCTGTAGAGGGCATCTTTTTCTCTGGCAGTTTTGCGTCAATATTT 1115218 Query 58035 TGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGC 58094 ||| |||||||||| || || ||||| || |||| || ||||| || ||||| || || Sbjct 1115217 TGGCTGAAGAAACGTGGTCTCATGCCTGGATTGACTTTCAGCAATGAATTGATTTCTCGG 1115158 Query 58095 GACGAGG 58101 || |||| Sbjct 1115157 GATGAGG 1115151 Score = 104 bits (114), Expect = 2e-17 Identities = 90/112 (80%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 57525 GAGAATCCCCGTAGATTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTAC 57584 || ||||| || | || ||||| || || ||| | ||||| ||||| ||| | |||||| Sbjct 1116481 GACAATCCACGCCGTTTCGTCATCTTCCCCATTCAGTATCCGGACATCTGGCAAATGTAC 1116422 Query 57585 AAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGG 57636 |||||||| || || ||||||||||| ||||||||||| ||| | ||||||| Sbjct 1116421 AAAAAGGCCGAGGCTTCGTTTTGGACTGTCGAAGAAGTTGACTTATCTAAGG 1116370 >seq504 Length=80497 Score = 132 bits (146), Expect = 4e-26 Identities = 169/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| || || ||||| || || || | || ||||| || ||| Sbjct 72433 ATGCAGATCTTTGTCAAGACCCTCACTGGCAAGACTATTACACTGGAAGTTGAGCCATCC 72492 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| | |||||| | ||| |||||||||||| | || || |||||| Sbjct 72493 GACACTATCGAGAATGTCAAAGCCAAAATTCAGGACAAGGAAGGAATTCCCCCTGACCAG 72552 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 |||||||| || ||||| || ||||| ||||||| | | | ||| | ||| || || Sbjct 72553 CAGCGTCTTATCTTCGCCGGTAAACAACTGGAAGA-TGGACGCACTCTCTCCGACTACAA 72611 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || ||||| ||||||||| | |||||| | ||||| || |||| Sbjct 72612 TATCCAGAAGGAATCCACTCTTCATTTAGTACTTCGTCTGAGAGGAGGTA 72661 Score = 102 bits (112), Expect = 7e-17 Identities = 166/238 (70%), Gaps = 1/238 (0%) Strand=Plus/Plus Query 31184 GAATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTT 31243 |||| ||||||||| || || || ||||| || || ||||| || ||||| | || ||| Sbjct 72197 GAAT-AAACATGCAGATCTTTGTGAAGACCCTCACCGGCAAGACCATCACATTGGAGGTT 72255 Query 31244 GAACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCG 31303 || || || |||| | |||| | || || | || |||||||| || | || Sbjct 72256 GAGCCATCTGACACTATCGAGAATGTGAAGGCCAAGATCCAAGACAAGGAGGGGATTCCC 72315 Query 31304 CCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC 31363 || ||||| || || |||||||||||||||| || |||||||| ||| | | Sbjct 72316 CCTGACCAACAACGGTTAATATTCGCTGGCAAGCAATTGGAAGATGGCCGCACTCTCTCC 72375 Query 31364 GATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || ||||||||||| || || || || | || | |||||| | || || || |||| Sbjct 72376 GACTATAACATTCAGAAGGAGTCCACCTTGCACTTAGTACTTCGTCTTAGAGGAGGTA 72433 Score = 102 bits (112), Expect = 7e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| || || ||||| || || || | || ||||| || || Sbjct 73117 ATGCAGATCTTTGTCAAGACACTCACTGGCAAGACTATTACACTGGAAGTTGAGCCATCG 73176 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | || | || ||| | ||| ||||| |||||| | || || ||||| Sbjct 73177 GATACAATTGAGAATGTTAAAGCCAAAATTCAAGACAAAGAAGGCATTCCTCCTGACCAA 73236 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 || ||||| || || |||||||| ||| | ||||| | | | ||| | ||| || || Sbjct 73237 CAACGTCTTATCTTTGCTGGCAAGCAGCTTGAAGA-TGGACGCACTCTCTCCGACTACAA 73295 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| || || ||||||||||||||| | |||||| | || || || |||| Sbjct 73296 CATCCAGAAGGAATCGACTCTTCATTTAGTACTTCGTCTAAGAGGTGGTA 73345 >seq397 Length=962699 Score = 131 bits (144), Expect = 1e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || || || || ||||| || ||||| || ||| | || || ||||| || Sbjct 57298 CATGCAGATCTTTGTTAAAACCCTGACTGGTAAAACCATAACCTTAGAGGTGGAACCTTC 57239 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | |||||| || || | || ||||||||| ||| | || || || || Sbjct 57238 CGACACTATCGAAAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCA 57179 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || ||||| || ||||| |||||||| | ||| || ||| ||||| Sbjct 57178 GCAGCGTCTTATCTTCGCGGGTAAACAATTGGAAGATGGTCGCACTTTGTCCGACTATAA 57119 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGT 31401 ||| || ||||| || || ||||||||||| Sbjct 57118 CATCCAGAAAGAGTCCACCCTTCATCTGGT 57089 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || || || || ||||| || ||||| |||||| | || || ||||| || Sbjct 57070 CATGCAGATCTTTGTTAAAACCCTGACTGGTAAAACCATCACCTTGGAGGTGGAACCTTC 57011 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| |||||| || || | || ||||||||||||| | || || ||||| Sbjct 57010 CGACACCATCGAAAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCAGACCA 56951 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | | || || || || |||||||||||||| | ||| || || ||||| Sbjct 56950 GCAGAGATTGATTTTTGCAGGTAAACAGTTGGAAGATGGTCGCACTTTGTCTGACTATAA 56891 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGT 31401 ||| || |||||||| || ||||||||||| Sbjct 56890 CATCCAGAAAGAATCCACCCTTCATCTGGT 56861 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || || || || ||||| || ||||| |||||| | || || ||||| || Sbjct 56842 CATGCAGATCTTTGTTAAAACCCTGACTGGTAAAACCATCACCTTGGAGGTGGAACCTTC 56783 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | |||| || || | || |||||| |||||| | || || ||||| Sbjct 56782 TGACACCATTGAAAATGTGAAGGCCAAGATTCAGGACAAAGAAGGCATTCCCCCAGACCA 56723 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || ||||| || ||||| ||||||| | ||| || ||| ||||| Sbjct 56722 GCAGCGTCTTATCTTCGCGGGTAAACAACTGGAAGATGGTCGCACTTTGTCCGACTATAA 56663 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || ||||| || || ||||||||||| || Sbjct 56662 CATCCAGAAAGAGTCCACCCTTCATCTGGTGCT 56630 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || || || || ||||| || ||||| |||||| | || || || || || Sbjct 57754 CATGCAGATCTTTGTTAAAACCCTGACCGGTAAAACCATCACCTTGGAGGTGGAGCCTTC 57695 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||||| || || | || ||||||||||||| | || || ||||| Sbjct 57694 TGACACCATCGAAAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCA 57635 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || ||||| || ||||| ||||||| | ||| || || ||||| Sbjct 57634 GCAGCGTCTTATCTTCGCGGGTAAACAACTGGAAGATGGTCGCACTTTGTCTGACTATAA 57575 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || ||||| || || ||||||||||| || Sbjct 57574 CATCCAGAAAGAGTCCACCCTTCATCTGGTGCT 57542 Score = 118 bits (130), Expect = 9e-22 Identities = 157/217 (72%), Gaps = 1/217 (0%) Strand=Plus/Minus Query 31185 AATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTG 31244 ||||| | ||||||||||| || || ||| | || || ||||| |||||| | || |||| Sbjct 58672 AATCACA-ATGCAAATTTTTGTGAAAACTTTAACTGGTAAAACTATCACCTTGGAAGTTG 58614 Query 31245 AACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGC 31304 | || ||||| | | |||| || ||| | ||| |||||||||||| | || | Sbjct 58613 AGCCATCCGATACAATTGAAAATGTAAAAGCAAAAATTCAAGACAAGGAAGGCATACCAC 58554 Query 31305 CCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCG 31364 | || |||||||| | || ||||| ||||| || || |||||| ||| | | Sbjct 58553 CTGATCAGCAGCGATTGATTTTCGCGGGCAAGCAATTAGAAGACGGACGTACTCTTTCGG 58494 Query 31365 ATTATAACATTCAAAAAGAATCGACTCTTCATCTGGT 31401 |||| || |||||||||||||| |||||||| || || Sbjct 58493 ATTACAATATTCAAAAAGAATCTACTCTTCACCTCGT 58457 Score = 105 bits (116), Expect = 6e-18 Identities = 150/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || || || || ||||| || ||||| |||||| | || || ||||| || Sbjct 57526 CATGCAGATCTTTGTTAAAACCCTGACCGGTAAAACCATCACCTTGGAAGTGGAACCTTC 57467 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | |||| || || | || |||||| |||||| | || || || || Sbjct 57466 TGACACCATTGAAAATGTGAAGGCCAAGATTCAGGACAAAGAAGGCATTCCCCCAGATCA 57407 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || |||||||| ||||| | ||||| || || ||| ||||| Sbjct 57406 GCAGCGACTTATCTTCGCTGGTAAACAACTAGAAGATGGGCGCACATTGTCCGACTATAA 57347 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTA 31402 ||| || ||||| || || |||||||||||| Sbjct 57346 CATCCAGAAAGAGTCCACCCTTCATCTGGTA 57316 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || || || || ||||| || ||||| || ||| | || || ||||| || Sbjct 56614 CATGCAGATATTTGTTAAAACCCTGACCGGTAAAACCATAACCTTGGAGGTGGAACCTTC 56555 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| |||||| || || | || ||||||||||||| | || || ||||| Sbjct 56554 CGACACCATCGAAAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCAGACCA 56495 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | | || || || || ||||| ||||||| | ||| || ||| || || Sbjct 56494 GCAGAGATTGATTTTTGCGGGTAAACAACTGGAAGATGGTCGCACTCTGTCCGACTACAA 56435 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGT 31401 ||| ||||| || || ||||| || |||| Sbjct 56434 CATCCAAAAGGAGTCCACTCTCCACTTGGT 56405 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || ||||||||| | || |||||||| || ||| | || ||||| | || Sbjct 57982 CATGCAGATCTTTGTAAAGACTTTAACTGGCAAAACAATAACCTTAGAAGTTGAGTCATC 57923 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | | | || | || || | || |||||| |||||| | || || || || Sbjct 57922 GGATACTATTGAGAATGTGAAGGCCAAGATCCAGGACAAAGAAGGCATTCCTCCAGATCA 57863 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||| | | || ||||| || |||||||||||||| | ||| || || ||||| Sbjct 57862 GCAGAGATTGATTTTCGCAGGTAAACAGTTGGAAGATGGTCGCACTTTGTCTGACTATAA 57803 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || || || || |||||||| || || Sbjct 57802 CATCCAGAAGGAGTCCACCCTTCATCTAGTGCT 57770 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/214 (69%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || |||||||| || || || || ||||| || ||| | || || || ||||| Sbjct 58437 ATGCAGATCTTCGTAAAAACCCTCACTGGTAAAACTATTACCCTTGAGGTGGAGCCGTCT 58378 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||||| || || | || ||||||||||| | || || || ||| Sbjct 58377 GATACCATCGAAAACGTGAAGGCTAAGATTCAAGACAAGGAAGGTATTCCCCCAGATCAG 58318 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC--TCTATGACTATGAGCGATTATA 31370 || || || || ||||| || || ||| | |||||| | ||| | | || || | Sbjct 58317 CAACGCCTGATCTTCGCAGGAAAGCAGCTCGAAGACGGACGTACACTTTCA--GACTACA 58260 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 | |||||||||||||| || ||||| || || || Sbjct 58259 ATATTCAAAAAGAATCTACACTTCACCTTGTTCT 58226 >seq852 Length=562639 Score = 125 bits (138), Expect = 6e-24 Identities = 244/350 (70%), Gaps = 8/350 (2%) Strand=Plus/Plus Query 41486 CGCCGAGCGAAGGATTAGCGCCCTTGCCTCCGGGAAACTCCCAGTCTATGTCGACTCCGT 41545 ||||||| ||| |||||||||||||| || || || ||||| || || ||||| || | Sbjct 33271 CGCCGAGGTTAGGGTTAGCGCCCTTGCCGCCAGGGAATTCCCAATCGATATCGACACCAT 33330 Query 41546 CGAAAAATTTCCAAGTGTTTAAAAATTCTCGGACCGAATCGAC-AAACGTCGCCCGGTTG 41604 | || |||||||| || | | ||||| || |||| ||| ||||| ||| || Sbjct 33331 CAAAGAATTTCCACGTCATCAGGAATTCCTTAACTGAATTGACGAAACG-GTCCCTCTTC 33389 Query 41605 GACGGATCATTCATATAA-TAGAACGGATCCGACAGAGTCCAACCGCCTATAGACGGTAA 41663 ||| ||| | || |||| ||||| | ||||||||||| || |||||||| | Sbjct 33390 ACTTTGTCA-TCAAAGAAGAAGAAAGGATCAGCAAGAGTCCAACCTCCAATAGACGGCAG 33448 Query 41664 AATTTTCAA-TGATTTCAACGATCGCTTTGCGGCCATCATCTGGCCAAAATTACCTTTGA 41722 ||||| || | | || | | |||| | ||||| || || || || || ||| Sbjct 33449 GATTTTTAAGTCAGGTC-TGGCTTGCTTCAATGACATCAGTTGACCGAAGTTGCCCTTGT 33507 Query 41723 TAGGTTCGTTCCAA-TCGCTAACGCCTTTGAGAGGTTTCTGTACTGCGGCCCAGGGATCG 41781 |||||| |||||| | ||| ||||| | |||||||| | |||||||| |||||| Sbjct 33508 AAGGTTCATTCCAAGATGATAATCCCTTT-TGTGGTTTCTGGAGAGCGGCCCATGGATCG 33566 Query 41782 TGTATGGCCACTTGGAAATCTTTTCGGCCCGCGCAAGATTTTTGCAGAGC 41831 || |||| ||| | ||| |||| ||| || |||||| ||||| ||| Sbjct 33567 TGGATGGACACCTTGAAGTCTTCTCGACCGCTGCAAGACCGTTGCAAAGC 33616 >seq27819 Length=1354 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || || || || ||||| | || |||||||| || Sbjct 859 ATGCAGATCTTCGTTAAGACCCTCACCGGGAAGACCATCACTTTGGAAGTTGAACCATCT 918 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | |||| || ||| | ||| ||||||||| || | || || |||||| Sbjct 919 GATACAATTGAAAATGTTAAAGCCAAAATTCAGGACAAGGAGGGAATTCCCCCTGACCAG 978 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || ||||||||||| ||||||||||| || | ||||||||| Sbjct 979 CAGCGTCTCATCTTCGCTGGCAAGCAGTTGGAAGATGGCCGCACCCTCTCCGATTATAAT 1038 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || |||||||| || | ||| | |||||| | || || || |||| Sbjct 1039 ATCCAGAAAGAATCCACCTTGCATTTAGTACTTCGTCTAAGAGGTGGTA 1087 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || || || || || || || || ||||| | || |||||||| || Sbjct 175 ATGCAGATCTTTGTCAAAACCCTCACCGGGAAGACCATCACTTTGGAAGTTGAACCATCT 234 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | |||| || ||| | ||| ||||||||| || | || || |||||| Sbjct 235 GATACAATTGAAAATGTTAAAGCCAAAATTCAGGACAAGGAGGGAATTCCCCCTGACCAG 294 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || ||||||||||| ||||||||||| || | ||||||||| Sbjct 295 CAGCGTCTCATCTTCGCTGGCAAGCAGTTGGAAGATGGCCGCACCCTCTCCGATTATAAT 354 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || |||||||| ||| | ||| | ||| | ||| || | || |||| Sbjct 355 ATCCAGAAAGAATCCACTTTGCATTTAGTATTGAGATTGCGAGGAGGTA 403 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || ||||| || || || | || ||||| || || Sbjct 403 ATGCAGATCTTCGTTAAGACCCTTACTGGCAAGACTATTACATTAGAAGTTGAGCCATCG 462 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| || ||| | ||| |||||||||||| | || || ||||| Sbjct 463 GACACAATTGAAAATGTGAAAGCTAAAATTCAGGACAAGGAAGGAATTCCCCCTGACCAA 522 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || |||||||| || |||||||| || | ||| || ||| Sbjct 523 CAGCGTCTTATCTTTGCTGGCAAGCAATTGGAAGATGGCCGCACCCTCTCCGACTACAAC 582 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || ||||| || |||||| | |||||| | || || || |||| Sbjct 583 ATCCAGAAGGAATCAACACTTCATTTAGTACTTCGTCTAAGAGGTGGTA 631 >seq87 Length=431742 Score = 109 bits (120), Expect = 5e-19 Identities = 158/222 (71%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 31185 AATCA--AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGT 31242 ||||| || |||||||| ||||| ||||| || || || || || |||||| |||| || Sbjct 313399 AATCACCAAAATGCAAATCTTCGTGAAGACCCTAACGGGAAAGACAATCACCCTCGAGGT 313458 Query 31243 TGAACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCC 31302 || | || |||| |||| | || || | || |||||| || ||| | || Sbjct 313459 GGAGGCCTCTGACACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAAGAGGGCATTCC 313518 Query 31303 GCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAG 31362 ||||||||||||||||| || ||||| ||||| ||| ||||||| | ||| | Sbjct 313519 TCCCGACCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGTCGCACTCTTTC 313578 Query 31363 CGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || |||||||| || || |||||||| || |||| || Sbjct 313579 TGACTACAACATTCAGAAGGAGTCGACTCTCCACTTGGTGCT 313620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445599365757840