Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lerema_20accius_20[genbank_20GCA_5F001278395.1_202015-09-02] 29,977 sequences; 298,169,737 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq206 118 6e-22 >seq206 Length=594349 Score = 118 bits (130), Expect = 6e-22 Identities = 136/182 (75%), Gaps = 1/182 (1%) Strand=Plus/Plus Query 3902 GGGTTCTCGGTTGAGGGTCAAGAAAATATGCAAGAAATGTTATCGAAAAAGATGTATTTG 3961 || ||||| || ||||| || |||||||| |||||||| | || ||| | |||||||| Sbjct 28429 GGTTTCTCAGTAGAGGGACAGGAAAATATTCAAGAAATTCTTTCAAAACAATTGTATTTG 28488 Query 3962 TGTCAATGTTTAATTGCATTGATGATCATACGAATTGGTGGTCATTGTGTTATCAAATTT 4021 ||||| |||||| ||||||||| | |||| | ||||| | | ||| ||||||| Sbjct 28489 TGTCAGTGTTTAGCAGCATTGATGTTGGTACGGACCGGTGGAAACTTTGTAGTCAAATTG 28548 Query 4022 TTCGATATATTTACACCTTTTAGTGCTGGTTTAGTGTATTTGATGTATAGATCTTTT-AA 4080 || ||| | || || || || |||| ||| ||| | ||| | ||||| |||| |||| || Sbjct 28549 TTTGATGTGTTCACTCCATTCAGTGTTGGCTTAATCTATATTATGTACAGATGTTTTGAA 28608 Query 4081 TC 4082 || Sbjct 28609 TC 28610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276452562611431