Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lerema_20accius_20[genbank_20GCA_5F001278395.1_202015-09-02] 29,977 sequences; 298,169,737 total letters Query= NC_006641.1 Length=15959 Score E Sequences producing significant alignments: (Bits) Value seq146 136 4e-28 >seq146 Length=1266914 Score = 136 bits (150), Expect = 4e-28 Identities = 170/229 (74%), Gaps = 7/229 (3%) Strand=Plus/Minus Query 3705 GTCA-GTTTGAAAAAATGA-CAAACTGTAGTGAGTTGATCACTATTTTTGTTCACTATTC 3762 |||| ||||||||||| | || ||||||||||| |||||| |||| ||||||| |||| Sbjct 999420 GTCACGTTTGAAAAAAGCAGCAGGCTGTAGTGAGTGGATCACAATTTCTGTTCACGATTC 999361 Query 3763 AAAAAGCTATTTGCTTATGAAGTTTGTTAATGATTAAAAACAATTTTAACCGCAATAAAG 3822 |||||||| ||||||||| ||| | |||| ||| ||||| ||||||| |||||| Sbjct 999360 AAAAAGCTTCGTGCTTATGATATTTAGTGATGACTAATTACAATGTTAACCGTAATAAAA 999301 Query 3823 TCTCAATTAGATTACTTTCTAAATTCAGCTTGATCGGAAAATGTATCGCTGAACTATAAT 3882 ||||||| | || | | |||||||||| | | ||| | |||||| ||| || Sbjct 999300 TCTCAATCAAATCGCCTATTAAATTCAGCCAGTT---AAACAATTCCGCTGAGCTACGAT 999244 Query 3883 GTACTCATAAACAAATACAACCTCATAAA--ACAAAACATAAATTTCTT 3929 | | | | || | ||||| ||| |||||| | ||| |||||||| || Sbjct 999243 GCATTAACAAGCGAATACTACCACATAAAGTATGAAATATAAATTTTTT 999195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 50932740129622