Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lerema_20accius_20[genbank_20GCA_5F001278395.1_202015-09-02] 29,977 sequences; 298,169,737 total letters Query= NC_006655.1 Length=15279 Score E Sequences producing significant alignments: (Bits) Value seq146 152 5e-33 >seq146 Length=1266914 Score = 152 bits (168), Expect = 5e-33 Identities = 258/365 (71%), Gaps = 9/365 (2%) Strand=Plus/Plus Query 7768 TCTGCATTCCATTGTGTTGCGCTTTTCGTTCTTCTTGCTCCTCTGCTTGTATCCCTTTAA 7827 |||| ||||| | ||||| | |||| | | |||| || || | ||| || |||| || Sbjct 1000732 TCTGTGTTCCACTCGGTTGCACACTTCGATATCCTTGTTCTTCCGATTGAATTCCTTAAA 1000791 Query 7828 CAAGaaaaaatataaattagattttttagaaacaaaaatggactaaaatttcggaaaaca 7887 ||| ||| | ||||||| |||| | ||| | || | | || |||| | ||||| || Sbjct 1000792 CAAAGAAAGA-ATAAATTGAATTTCCTGGAAGCGAACAAGAAC-AAAAGTGAGGAAAGCA 1000849 Query 7888 aacaatATAAAGTACTTACTCGGAATAACATTACTAACAACGAGTAACGTTGCTACAGTG 7947 ||||| | | || ||||||| | ||| |||||||| | | ||| |||||| ||| | Sbjct 1000850 AACAAAAAACAGAACTTACTTGAAATGCCATTACTAGCGATGAGAAACGTTACTATGATA 1000909 Query 7948 ATGGACAACATGCCGGCTACAGTGTTCGTTCAATACTGCGGTCCT-TCCGTGCC-AGCGC 8005 ||| |||||||||| ||||||||||| |||||| |||| ||||| | | |||| |||| Sbjct 1000910 ATGTACAACATGCCAGCTACAGTGTTTTTTCAATCCTGC-GTCCTATTCATGCCTTGCGC 1000968 Query 8006 CGCTTTTTATAGGGGCAACTCGTGCGTCATGCGCATGCGATAACAGTCCACAGACTGTTT 8065 ||||||||| ||||||||| || |||| ||| || | || || || | Sbjct 1000969 GACTTTTTATAACGGCAACTCGCATCCCACGCGCGTGCCTAAATACTC--TGGAATG--T 1001024 Query 8066 TATGGAACTAACAGTAAAATAAATTAATTTAATGATTCATCATCCTAAATGCGTGTTGAT 8125 || ||| || |||||||||| || ||||||| || | | ||| || ||||| | Sbjct 1001025 CATTCAACGTACTATAAAATAAATATATGGAATGATTAATTAGCTTAATTGTGTGTTAGT 1001084 Query 8126 AATTA 8130 ||||| Sbjct 1001085 AATTA 1001089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 48757494350942