Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lerema_20accius_20[genbank_20GCA_5F001278395.1_202015-09-02] 29,977 sequences; 298,169,737 total letters Query= NC_006657.1 Length=19820 Score E Sequences producing significant alignments: (Bits) Value seq146 136 5e-28 >seq146 Length=1266914 Score = 136 bits (150), Expect = 5e-28 Identities = 252/364 (69%), Gaps = 7/364 (2%) Strand=Plus/Plus Query 9930 TCTGCATTCCATTGTGTTGCGCTTTTCGTTCTTCTTGCCCCTCTGCTTGTATCCttttaa 9989 |||| ||||| | ||||| | |||| | | |||| | || | ||| || | || || Sbjct 1000732 TCTGTGTTCCACTCGGTTGCACACTTCGATATCCTTGTTCTTCCGATTGAATTCCTTAAA 1000791 Query 9990 caagaaaaaatataaattagattttttagaaacaaaaaaggactaaaatttcggaaaaca 10049 ||| ||| | ||||||| |||| | ||| | || ||| || |||| | ||||| || Sbjct 1000792 CAAAGAAAGA-ATAAATTGAATTTCCTGGAAGCGAACAAGAAC-AAAAGTGAGGAAAGCA 1000849 Query 10050 aacaatATAAAGTACTTACTCGGAATAACATTACTAACAACGAGTAACGTTGCTACAGTG 10109 ||||| | | || ||||||| | ||| |||||||| | | ||| |||||| ||| | Sbjct 1000850 AACAAAAAACAGAACTTACTTGAAATGCCATTACTAGCGATGAGAAACGTTACTATGATA 1000909 Query 10110 ATGGACAACATGCCAGCTACAGTATGCTTTCGATACTACGGTCCCTCCGTGCC-AGTGCC 10168 ||| ||||||||||||||||||| | |||| || || || | | | |||| | || Sbjct 1000910 ATGTACAACATGCCAGCTACAGTGTTTTTTCAATCCTGCGTCCTATTCATGCCTTGCGCG 1000969 Query 10169 GCTTTTTATAGAGGAAACTCGCACGTCATGCGCATGCGAAAATACTCCACAGACTGTTTC 10228 ||||||||| || |||||||| || |||| ||| |||||||| || || || Sbjct 1000970 ACTTTTTATAACGGCAACTCGCATCCCACGCGCGTGCCTAAATACTC--TGGAATG--TC 1001025 Query 10229 ATGGAAGTAACGGTACAATAAACTAGTTTAATGATTTATTATCCTAACTTCGTGTTGATA 10288 || || || || |||||| | ||||||| |||| | ||| | ||||| || Sbjct 1001026 ATTCAACGTACTATAAAATAAATATATGGAATGATTAATTAGCTTAATTGTGTGTTAGTA 1001085 Query 10289 ATTA 10292 |||| Sbjct 1001086 ATTA 1001089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 63283657705333