Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lerema_20accius_20[genbank_20GCA_5F001278395.1_202015-09-02] 29,977 sequences; 298,169,737 total letters Query= NC_006660.1 Length=20197 Score E Sequences producing significant alignments: (Bits) Value seq146 131 2e-26 >seq146 Length=1266914 Score = 131 bits (144), Expect = 2e-26 Identities = 169/229 (74%), Gaps = 7/229 (3%) Strand=Plus/Plus Query 5733 AAGAAATTTATGTTTTGT--TTTATGAGGTTGTATTTGTTTATGAGTACATTATAGTTCA 5790 || |||||||| ||| | |||||| ||| ||||| | || | | | ||| ||| ||| Sbjct 999195 AAAAAATTTATATTTCATACTTTATGTGGTAGTATTCGCTTGTTAATGCATCGTAGCTCA 999254 Query 5791 GCGATACATTTTCCGATCAAGCTGAATTTAGAAAGTAATCTAATTGAGACTTTATTGCGG 5850 ||| | ||| | | |||||||||| | | || | ||||||| |||||| ||| Sbjct 999255 GCGGAATTGTTT---AACTGGCTGAATTTAATAGGCGATTTGATTGAGATTTTATTACGG 999311 Query 5851 TTAAAATTGTTTTTAATCATTAACAAACTTCATAAGCAAATAGCTTTTTGAATAGTGAAC 5910 |||| ||||| ||| |||| | ||| ||||||||| |||||||||||| |||||| Sbjct 999312 TTAACATTGTAATTAGTCATCACTAAATATCATAAGCACGAAGCTTTTTGAATCGTGAAC 999371 Query 5911 AAAAATAGTGATCAACTCACTACAG-TTTATCATTTTTTCAAAC-TGAC 5957 | |||| |||||| ||||||||||| | | ||||||||||| |||| Sbjct 999372 AGAAATTGTGATCCACTCACTACAGCCTGCTGCTTTTTTCAAACGTGAC 999420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 64489639556160