Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lerema_20accius_20[genbank_20GCA_5F001278395.1_202015-09-02] 29,977 sequences; 298,169,737 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq852 179 3e-40 seq28624 172 5e-38 seq397 125 7e-24 seq87 122 8e-23 seq6 111 1e-19 seq504 102 8e-17 seq27819 98.7 9e-16 >seq852 Length=562639 Score = 179 bits (198), Expect = 3e-40 Identities = 373/549 (68%), Gaps = 10/549 (2%) Strand=Plus/Minus Query 23598 GAGAACAACAAACGTTTCGAG-AAACGCACCGATAAGATCGTCGCCGCCTACTTTGTCGA 23656 ||||| ||||| | ||| || |||| || ||| | |||| |||||||| || || Sbjct 33814 GAGAAGAACAAGCCCTTCAAGCAAACATCTGGAAAAG-TAGTCGGTGCCTACTTCGTAGA 33756 Query 23657 GTGGGGCGTATATCCCAGACAATTTCCCGTAGACAAAGTGCCCGTGCCTAATTTGTCACA 23716 ||||| || |||||| | | || || || |||||| | || | || || | | || Sbjct 33755 ATGGGGTGTGTATCCCCGGAAGTTCCCTGTGGACAAAATTCCAATTCCAAACCTCACGCA 33696 Query 23717 TTTGCTCTACGGCTTCGTACCTATATGCGGCGGCGAGGGAATTAACGACGCTCTCAA--- 23773 | | | ||||| ||| | || || || || || || || || |||||| | | || Sbjct 33695 TCTTTTATACGGGTTCATCCCAATTTGTGGGGGAGATGGCATCAACGACAGTTTGAAGGA 33636 Query 23774 AACCGTGCCGGGCAGTTTCGAGGCGCTGCAGCGTTCGTGCGCGGGCCGCGCCGACTTCAA 23833 || || ||||||||| | || |||| || || ||| || || | |||||||| Sbjct 33635 AATCGAA---GGCAGTTTCCAAGCTTTGCAACGGTCTTGCAGCGGTCGAGAAGACTTCAA 33579 Query 23834 GGTATCCATCCACGATCCGTGGGCAGCTCTTCAGAAGCCGCAGAAGGGAGTGTCGGCGTG 23893 ||| |||||||||||||| ||||| ||||| ||||| || || |||||| | || | || Sbjct 33578 GGTGTCCATCCACGATCCATGGGCCGCTCTCCAGAAACCACAAAAGGGATTATCATCTTG 33519 Query 23894 GAACGAGCCGTATCGTGGAAACTTTGGTCAGTTGATGGCAACGAAACTGGCGTATCCGCA 23953 ||| || || || || ||||| ||||| ||||| || ||| | || || | Sbjct 33518 GAATGAACCTTACAAGGGCAACTTCGGTCAACTGATGTCATTGAAGCAAGCCAGACCTGA 33459 Query 23954 CTTGAAAGTGCTACCTTCGATCGGTGGCTGGACGCTGTCTGATCCGTTTTATCACATGCA 24013 ||| ||| | || || || || || || ||||| || ||||||| || | | | | Sbjct 33458 CTTAAAAATCCTGCCGTCTATTGGAGGTTGGACTCTTGCTGATCCTTTCTTCTTCTTTGA 33399 Query 24014 CGAGCCCAGCGTACGCCGTGTGTTT-ATCGACTCTGTCGAAGAGTTTTTGTTAACGTGGA 24072 || | || | | | |||| || | || || | || || || | ||||||| Sbjct 33398 TGA-CAAAGTGAAGAGGGACCGTTTCGTCAATTCAGTTAAGGAATTCCTGATGACGTGGA 33340 Query 24073 AATTCTTTGACGGCGTCGACATTGATTGGGAGTTCCCCGGCGGCAAAGGGGCAAATCCCA 24132 |||||||||| || ||||| || |||||||| ||||| |||||||| || || || || | Sbjct 33339 AATTCTTTGATGGTGTCGATATCGATTGGGAATTCCCTGGCGGCAAGGGCGCTAACCCTA 33280 Query 24133 ACGTTGGCG 24141 || | |||| Sbjct 33279 ACCTCGGCG 33271 >seq28624 Length=432676 Score = 172 bits (190), Expect = 5e-38 Identities = 678/1063 (64%), Gaps = 5/1063 (0%) Strand=Plus/Minus Query 144737 GCCGCTGGCTTGGTGCGCAAATAGTACATGCCCGTTTTGAGTCCCGAGCGCCAAGTGTAG 144796 || || || || || |||||||| ||||| || ||||| | ||| ||||| || | Sbjct 59664 GCGGCGGGTTTCGTCCGCAAATAATACATTCCAGTTTTCAAACCCATCTTCCAAGCGTGG 59605 Query 144797 TCGTGTATCGACGTCATCAGAGCGTACGTGGGCTCCGCCACAAACAAATTTAGCGATTGG 144856 || || || |||| | |||| | ||||| || || | || | ||||||| Sbjct 59604 AAATGAATTGATGTCAATTTACCGTAATTTGGCTCAGCAACGTGAATGTTAAACGATTGG 59545 Query 144857 CTTTGATCAATGAAAGCGTTGCGGTCGGCGGCCATCTCAATCATACGTTTGCATTTCATT 144916 |||||||| || ||||| | ||| || ||||||| ||| || |||| | || Sbjct 59544 CTTTGATCGATAAAAGCACCTCTGTCTGCAGCCATCTGAATTGTAGTTTTGACTGATATC 59485 Query 144917 TCCCAAGCGGTCTTGTACAAACGTTTAATGTGGTCCGGAATGCCGTCAATCGCCTGAATC 144976 ||||| | || ||||| | | || | | ||| || | ||||| ||||| Sbjct 59484 TCCCATACTGTTTTGTATAGCTCCCTGATATCTTTCGGTATACTTTCAATATTTTGAATG 59425 Query 144977 GACCCCTTGTGCGCAAATATGGCGTTCCGCATTTCGGACGTGTACAGTTTTAACTTGATC 145036 || || || | || ||| ||| ||| ||| |||| | || || Sbjct 59424 GAGCCATTATTGTGAATTATAAGATTCTTCATATCGTCATCCCACAGCTCGGCCTGTGTC 59365 Query 145037 AAGTCGTCAATTAAG-TACTGATTGACGACCTGAAACTCGCCGGCCAACACACGACGCAA 145095 || || || | ||| | ||||| |||||||| || ||||| | || || | ||| Sbjct 59364 AAATC-TCGAAGAAGATGGTGATTTACGACCTGGAATTCGCCAGATAAAACTCTGCGCTG 59306 Query 145096 ATACACGTTAGACGTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGT 145155 ||| | || || ||||| || ||||| ||||| || || || || ||||| || || | Sbjct 59305 ATATATATTTGAAGTGAACGGCTCAAAGGACTCATTGTTACCAAGAATTTGTGCAGTAGA 59246 Query 145156 TGCGGTGGGCATGTACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTC 145215 || || ||||| || | || | ||||| | | ||||| || || | ||| Sbjct 59245 AGCTGTAGGCATTGGAGCTAGTAACAGCGAATTTCTTAAACCGTGTTTTGCTATTTTTTC 59186 Query 145216 CTTTAGCGTACCCCAATCCCATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAA 145275 || || || ||| | |||||| || ||| | |||||||| || || ||||| Sbjct 59185 TTTGAGAGTTGTCCAGTTCCATAGGTCCGTTGGCGTTTTCTCCCACATATCATATTGCAA 59126 Query 145276 AATGCCCTCGCTGGCGGGGCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAG 145335 ||| |||| || || ||||| |||| | | |||||||| ||| | ||| || | Sbjct 59125 AATACCCTTACTTGCAGGGCTACCTTCATATGAACTGTATGGGCCATATTTTTCAGCTAA 59066 Query 145336 CTCGCAACTCGCCTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAG 145395 || || || || || | || || ||||||| ||||| |||||| ||| || Sbjct 59065 TTCACAGCTTGCTTCTAATGCTCCATAATAAATAGTCTCAAAAATTTGTTGGTTAAGTTT 59006 Query 145396 CATCGCTTCATCGCTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTG 145455 || |||| || || || ||||| || | || | ||||||||||| || | || || Sbjct 59005 GATAGCTTTTTCACTTTCATACGGTATTCTCATTATAACAAAAGCATCAGCTAATCCTTG 58946 Query 145456 TATTCCCACGCCGATGGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATA 145515 | || | || || || | |||| |||| ||| | | || || ||| || Sbjct 58945 AACACCAATACCAATAGGTCTATGTCTCATATTGGAATTTTTTGCTTCAGGGACAGGGTA 58886 Query 145516 TCGATTACGGTCGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAA 145575 |||| || || ||||||||||| ||| | | | ||| || | | ||| Sbjct 58885 ATAATTAACTTCAATGATTTTATTCAAATTTTGTGTGATGATCTTGGTGACTTCTTTCAA 58826 Query 145576 CTTTTCAAAGTCAAACCGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGC 145635 |||||||||| | | || | ||| || || | |||| | || || || || Sbjct 58825 TTTTTCAAAGTTATA---AGATTTGTCTTCGTTTACGAACATATTTAAAGCAATAGATGC 58769 Query 145636 CAAATTACAAACTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATT 145695 ||||| || ||||| || || | || |||||| ||| || || | || | ||| Sbjct 58768 TAAATTGCACACTGCTACTTCATCAGAATCAGTGTATTCTACAATTTCCGTACAGAGATT 58709 Query 145696 GCTACATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTA 145755 ||| ||||| || || || | |||||| || || || || |||||||| | ||| ||||| Sbjct 58708 GCTGCATTTAATAGTGCCTAAATTTTGTTGGTTGCTCTTTCTGTTGCAAGAGTCTTTGTA 58649 Query 145756 GAGCATGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGATA 145798 ||||| | ||| |||||| ||||| || | || || ||| Sbjct 58648 AAGCATAAATGGTGTGCCAGTTTCCACTTGTGCTTCAACAATA 58606 >seq397 Length=962699 Score = 125 bits (138), Expect = 7e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||||||||||| ||| | ||| |||||||| || ||||| || || Sbjct 57754 GCCACCACGGAGACGCAGCACTAGATGAAGGGTGGACTCCTTCTGGATGTTATAGTCAGA 57813 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||||| || || | ||| || |||||| | || || | |||||| || ||||| Sbjct 57814 CAAAGTGCGACCATCTTCCAACTGTTTACCTGCGAAAATCAATCTCTGCTGATCTGGAGG 57873 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||||||||| ||| || ||| | | ||| | |||||| | ||||| | Sbjct 57874 AATGCCTTCTTTGTCCTGGATCTTGGCCTTCACATTCTCAATAGTATCCGATGACTCAAC 57933 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | ||| | ||||| || |||| ||| ||||| || ||||||||| Sbjct 57934 TTCTAAGGTTATTGTTTTGCCAGTTAAAGTCTTTACAAAGATCTGCATG 57982 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||||||||| | ||||| || || || | || ||||||||||| |||||||| ||| Sbjct 56386 GCCACCGCGAAGACGCAAAACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGA 56445 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||||| || || || || || || || | || || | ||||||||| ||||| Sbjct 56446 CAGAGTGCGACCATCTTCCAGTTGTTTACCCGCAAAAATCAATCTCTGCTGGTCTGGAGG 56505 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||| ||||| ||| || ||| | | || | || |||| | || | Sbjct 56506 AATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCGGAAGGTTCCAC 56565 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | ||| | |||||||||||| || ||||| || || ||||||||| Sbjct 56566 CTCCAAGGTTATGGTTTTACCGGTCAGGGTTTTAACAAATATCTGCATG 56614 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||||||||| | ||| | ||| ||||| || || ||||| || || Sbjct 57526 GCCACCACGGAGACGCAGCACCAGATGAAGGGTGGACTCTTTCTGGATGTTATAGTCAGA 57585 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||||| || || || || || || ||| |||| | |||||||||||| || || Sbjct 57586 CAAAGTGCGACCATCTTCCAGTTGTTTACCCGCGAAGATAAGACGCTGCTGGTCTGGGGG 57645 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||| ||||| ||| || ||| | | || | || || | | ||| | Sbjct 57646 AATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCAGAAGGCTCCAC 57705 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | ||| | |||||||||||| || ||||| || || ||||||||| Sbjct 57706 CTCCAAGGTGATGGTTTTACCGGTCAGGGTTTTAACAAAGATCTGCATG 57754 Score = 102 bits (112), Expect = 8e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||||||||| | ||| | ||| ||||| || || ||||| || ||| Sbjct 56614 GCCACCACGGAGACGCAGCACCAGATGAAGGGTGGACTCTTTCTGGATGTTATAGTCGGA 56673 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||||| || || || || || || ||| |||| | |||||||||||| || || Sbjct 56674 CAAAGTGCGACCATCTTCCAGTTGTTTACCCGCGAAGATAAGACGCTGCTGGTCTGGGGG 56733 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||||||||| || || ||| | | || | || || | | || | Sbjct 56734 AATGCCTTCTTTGTCCTGAATCTTGGCCTTCACATTTTCAATGGTGTCAGAAGGTTCCAC 56793 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | ||| | ||||||||| || || ||||| || || ||||||||| Sbjct 56794 CTCCAAGGTGATGGTTTTACCAGTCAGGGTTTTAACAAAGATCTGCATG 56842 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||||| || | ||| | ||| ||||| || || ||||| || ||| Sbjct 57298 GCCACCACGGAGACGCAATACCAGATGAAGGGTGGACTCTTTCTGGATGTTATAGTCGGA 57357 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || |||||| || ||||| || || || ||| |||| | |||||||| || || || Sbjct 57358 CAATGTGCGCCCATCTTCTAGTTGTTTACCAGCGAAGATAAGTCGCTGCTGATCTGGGGG 57417 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||||||||| || || ||| | | || | || || | | || | Sbjct 57418 AATGCCTTCTTTGTCCTGAATCTTGGCCTTCACATTTTCAATGGTGTCAGAAGGTTCCAC 57477 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | ||| | |||||||||||| || ||||| || || ||||||||| Sbjct 57478 TTCCAAGGTGATGGTTTTACCGGTCAGGGTTTTAACAAAGATCTGCATG 57526 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||| | |||||||| | || || || || || |||||||| || Sbjct 57982 GCCACCACGGAGACGTAATACTAAATGAAGAGTAGATTCTTTCTGGATGTTGTAGTCTGA 58041 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || |||||| || || | ||||| || || | || | | || ||||| || || Sbjct 58042 CAAAGTGCGCCCATCTTCCAATTGCTTACCAGCAAATATCAGTCTTTGTTGGTCTGGTGG 58101 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGA 131185 || || |||||||| ||| ||| |||| | | || | || || | | ||| | Sbjct 58102 AATACCCTCTTTGTCT-TGAATTTTAGCTTTTACATTTTCTATGGTGTCAGAAGGCTCCA 58160 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| |||| |||||||||||| |||||||| |||||||||||||| Sbjct 58161 CCTCGAGAGTAATGGTTTTACCGGTGAGAGTTTTAACGAAAATCTGCAT 58209 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || || || |||||||| ||||| || | || || ||| || |||||||| ||| Sbjct 58241 GTAGATTCTTTTTGAATATTGTAGTCTGAAAGTGTACGTCCGTCTTCGAGCTGCTTTCCT 58300 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| |||| | || ||||| || || || || ||||| ||||| || || ||| Sbjct 58301 GCGAAGATCAGGCGTTGCTGATCTGGGGGAATACCTTCCTTGTCTTGAATCTTAGCCTTC 58360 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | ||||| | | ||| | || | ||||| |||||||| || || ||| Sbjct 58361 ACGTTTTCGATGGTATCAGACGGCTCCACCTCAAGGGTAATAGTTTTACCAGTGAGGGTT 58420 Query 131218 TTTACGAAAATCTGCAT 131234 |||||||| |||||||| Sbjct 58421 TTTACGAAGATCTGCAT 58437 >seq87 Length=431742 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| || || | ||||||||||| ||||||||||| || Sbjct 313635 CCACCACGAAGACGTAGCACCAAGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCAGAA 313576 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| || || ||||||||||| ||| |||| | |||||||||||| ||||| Sbjct 313575 AGAGTGCGACCATCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGAGGA 313516 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || |||||||| ||| || ||| | | ||| | || || | || ||| | Sbjct 313515 ATGCCCTCTTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCAGAGGCCTCCACC 313456 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | || || || ||||| || || ||||| || ||||| Sbjct 313455 TCGAGGGTGATTGTCTTTCCCGTTAGGGTCTTCACGAAGATTTGCAT 313409 >seq6 Length=1691400 Score = 111 bits (122), Expect = 1e-19 Identities = 157/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 46069 AATGCGTTTGAACGTATGCCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATC 46128 ||||| ||||| ||||||||||| ||||| | |||||||| || ||||||| Sbjct 1115367 AATGCCGTTGAAACCCTGCCGTGCGTGAAGAAGAAGGCAGACTGGGCCCTGCAGTGGATA 1115308 Query 46129 AACAGCAGCACCGCGACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTC 46188 ||||| | || || |||| |||||| || || || ||||| ||| |||||| || Sbjct 1115307 GCCAGCAAGTCTGCAACATTCGGCGAGCGCATTGTCGCATTTGCTGCTGTAGAGGGCATC 1115248 Query 46189 tttttttCTGGCAGTTTTGCCGCCATCTTTTACATCAA-AACCAAGGGCATCATGCCCGG 46247 ||||| |||||||||||||| | || |||| | || || | || | ||||||| || Sbjct 1115247 TTTTTCTCTGGCAGTTTTGCGTCAATATTTTGGCTGAAGAAACGTGGTC-TCATGCCTGG 1115189 Query 46248 CCTGACGTTTAGCAACGAGCTGATATCGCGCGACGAGG 46285 |||| || ||||| || |||| || || || |||| Sbjct 1115188 ATTGACTTTCAGCAATGAATTGATTTCTCGGGATGAGG 1115151 Score = 100 bits (110), Expect = 3e-16 Identities = 99/123 (80%), Gaps = 4/123 (3%) Strand=Plus/Minus Query 46367 TCAAGGAGGCGGTGGCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGC-CCTG 46425 ||||||| ||||||||||| ||| ||||||| | |||| ||| ||||||| ||| |||| Sbjct 1114595 TCAAGGACGCGGTGGCCATCGAGCAGGAGTTCCTCACGGACGCGCTGCCCG-TGCGCCTG 1114537 Query 46426 CTGGGCATGAAC-GCACAGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCT 46484 || ||||||||| || || |||| || ||||| || ||||| |||||| ||||||| Sbjct 1114536 CTCGGCATGAACTGCGACCTC-ATGTCTGAGTACATTGAATTTGTGGCGGACAGACTGCT 1114478 Query 46485 CGT 46487 ||| Sbjct 1114477 CGT 1114475 >seq504 Length=80497 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | | ||| || |||||||| | ||||| ||||| || |||||||| ||| Sbjct 73343 CCACCTCTTAGACGAAGTACTAAATGAAGAGTCGATTCCTTCTGGATGTTGTAGTCGGAG 73284 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| || || ||||||||||| || |||| | ||| || ||||| ||||| Sbjct 73283 AGAGTGCGTCCATCTTCAAGCTGCTTGCCAGCAAAGATAAGACGTTGTTGGTCAGGAGGA 73224 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||||||||| ||| ||| |||| | | | ||| | ||||| | | ||| | Sbjct 73223 ATGCCTTCTTTGTC-TTGAATTTTGGCTTTAACATTCTCAATTGTATCCGATGGCTCAAC 73165 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| || || || || || || || || || |||||||| Sbjct 73164 TTCCAGTGTAATAGTCTTGCCAGTGAGTGTCTTGACAAAGATCTGCAT 73117 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || | || ||| || |||||||| | || || ||||| || || ||||| ||| Sbjct 72659 CCTCCTCTCAGACGAAGTACTAAATGAAGAGTGGATTCCTTCTGGATATTGTAGTCGGAG 72600 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| || || || || || || ||| |||| | |||||||||||| || || Sbjct 72599 AGAGTGCGTCCATCTTCCAGTTGTTTACCGGCGAAGATAAGACGCTGCTGGTCAGGGGGA 72540 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 |||||||| ||||| ||| ||| || |||| | ||| | ||| |||| | ||| | Sbjct 72539 ATTCCTTCCTTGTC-CTGAATTTTGGCTTTGACATTCTCGATAGTGTCGGATGGCTCAAC 72481 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| || || || || || || || || || |||||||| Sbjct 72480 TTCCAGTGTAATAGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 72433 >seq27819 Length=1354 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | | ||| || |||||||| | ||| || || || || || || |||||| Sbjct 1085 CCACCTCTTAGACGAAGTACTAAATGCAAGGTGGATTCTTTCTGGATATTATAATCGGAG 1026 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || | ||||||||| ||| |||| | |||||||||||| || || Sbjct 1025 AGGGTGCGGCCATCTTCCAACTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGGGGA 966 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGAT 131186 ||||| || ||||| ||| ||| |||| | | | || | ||||| | | || | Sbjct 965 ATTCCCTCCTTGTC-CTGAATTTTGGCTTTAACATTTTCAATTGTATCAGATGGTTCAAC 907 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || ||||| || || || ||||| |||||||| Sbjct 906 TTCCAAAGTGATGGTCTTCCCGGTGAGGGTCTTAACGAAGATCTGCAT 859 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || ||||| | || |||||||| | || || || || || || || |||||| Sbjct 401 CCTCCTCGCAATCTCAATACTAAATGCAAAGTGGATTCTTTCTGGATATTATAATCGGAG 342 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || | ||||||||| ||| |||| | |||||||||||| || || Sbjct 341 AGGGTGCGGCCATCTTCCAACTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGGGGA 282 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGAT 131186 ||||| || ||||| ||| ||| |||| | | | || | ||||| | | || | Sbjct 281 ATTCCCTCCTTGTC-CTGAATTTTGGCTTTAACATTTTCAATTGTATCAGATGGTTCAAC 223 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || ||||| || ||||| || || |||||||| Sbjct 222 TTCCAAAGTGATGGTCTTCCCGGTGAGGGTTTTGACAAAGATCTGCAT 175 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || ||||| | || |||||||| | || || ||||| ||||||||||| ||| Sbjct 857 CCTCCTCGCAATCTCAATACTAAATGAAGAGTGGATTCCTTCTGAATGTTGTAGTCGGAA 798 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| || |||| |||||||| || | || | ||||| ||||| ||||| Sbjct 797 AGAGTGCGTCCATCTTCTAATTGCTTGCCGGCAAAAATAAGTCGCTGTTGGTCAGGAGGA 738 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || |||||||| |||||| ||| | | ||| | || || | | ||| | Sbjct 737 ATCCCCTCTTTGTCTTGGATTTTAGCCTTTACATTCTCAATTGTGTCTGATGGCTCAACT 678 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || || || || || || || |||||||| Sbjct 677 TCTAATGTGATGGTCTTGCCAGTGAGTGTCTTCACAAAGATCTGCAT 631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471835930903680