Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lerema_20accius_20[genbank_20GCA_5F001278395.1_202015-09-02] 29,977 sequences; 298,169,737 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq852 210 2e-49 seq504 125 6e-24 seq27819 123 2e-23 seq397 114 1e-20 seq222 91.5 1e-13 >seq852 Length=562639 Score = 210 bits (232), Expect = 2e-49 Identities = 654/996 (66%), Gaps = 26/996 (3%) Strand=Plus/Plus Query 96114 TCGTTTTCGTAATT-TGACACTCCAGTCCAGCCGCGACCGTACATGGCCACGCCCACAAT 96172 ||||||||||| ||| || |||||||| || || |||||||| || || || || | Sbjct 32883 TCGTTTTCGTACCCGTGA-ACACCAGTCCATCCACGTCCGTACATAGCAACACCAACTAC 32941 Query 96173 AATTTTGCGCGGGTCCACGCCTTGATTTGTGAGCAATTTAACGGCATGGTCCGTGTTGTA 96232 | || ||| | || |||||| | | ||||||| | || || |||| Sbjct 32942 GACCTTCTTCGGATTGACTCCTTGAGCTAACAAGTATTTAACACCGAAATCAGTCGTGTA 33001 Query 96233 CAGCTCGTTTGGGTTCCAACTCGGCGCGTACAGTGTAGTTTGGTATCCCAAATCAATGTT 96292 || || || ||||| || |||||||| | || |||| || | ||| Sbjct 33002 TGTTTCCTTAGGATTCCAGGCTGGAGCGTACAGAGATGTCTGGTGACCTAGGGTGTCGTT 33061 Query 96293 TGACCACGCGCCTTTAAAATCGTAGCTCATGAGAAATATTTTGTCGAGGAACTTTTGCGC 96352 |||||||| || || || |||||| |||||| || || | ||| | | | || || || Sbjct 33062 CGACCACGCTCCCTTGAAGTCGTAGTTCATGAAGAAGATGTGGTCCATGTAGTTCTGTGC 33121 Query 96353 AACGTC-GTATTTTACTACAGCAATTTTGTCGTGGCCGGCACTGATTGCACTTGTCAACT 96411 || | ||| | || || ||| ||||| || |||||||| || || | || Sbjct 33122 G-CGACTGTAGTCGACCACTTGAATCTTGTCCCAACCAGCACTGATAGCTGAAGTTAGCT 33180 Query 96412 CGTACGTTTTGCCCGTTTGCAGTTGC-AACTCGTCTAACATCACGCGCAATTCCTTTAAT 96470 ||||| | ||||| || |||| || ||||||| | |||| | || | ||| || | | Sbjct 33181 CGTACTTCTTGCCAGTA-GCAGATGATAACTCGTTGAGCATCTCACGAAGTTCTTTCATT 33239 Query 96471 AGAATGTTGTACGTGTCAGCGTCGCGCTCTTTGTT--GCCGAGCGTCGGGTTGGCGCCTT 96528 | | || || || | || ||| | |||||| | ||||| ||||| | Sbjct 33240 AAGAGCACATAGGTTTCGCCATC-----CTTAGGACCGCCGAGGTTAGGGTTAGCGCCCT 33294 Query 96529 TACCGCCCGGAAATTCCCAGTCGATGTCCACTCCGTCGAAAAATTTCCAAACCTGCAAAA 96588 | ||||| || |||||||| ||||| || || || || || |||||||| | || | Sbjct 33295 TGCCGCCAGGGAATTCCCAATCGATATCGACACCATCAAAGAATTTCCACGTCATCAGGA 33354 Query 96589 ATTCTCTGACGGAGTCTACAAACACGCGCCGTTTTTCCGC-GTCGTGCATGTAATAGAAC 96647 |||| | || || | || || ||| || | || | ||| | | | | |||| Sbjct 33355 ATTCCTTAACTGAATTGACGAA-ACGGTCCCTCTTCACTTTGTCATCAAAGAAGAAGAAA 33413 Query 96648 GGGTCGGACAGTGTCCAGCCGCCGATAGACGGCAGAATTTTAAGGTGTGGATTAGCCAGT 96707 || || | || ||||| || || ||||||||||| ||||| | || || | || | Sbjct 33414 GGATCAGCAAGAGTCCAACCTCCAATAGACGGCAGGATTTTTAAGTCAGGTCTGGCTTGC 33473 Query 96708 TTGGCCGCCATCAACTGACCAAAGTTGCCTTTGTAGGGCTCGTTCCAAGCAGACACGCCC 96767 || | ||||| ||||| |||||||| ||||| || || ||||||| || | ||| Sbjct 33474 TTCAATGACATCAGTTGACCGAAGTTGCCCTTGTAAGGTTCATTCCAAGATGATAATCCC 33533 Query 96768 TTTTGCGGTTTTTGTACTGCGGCCCAAGGGTCGTGAATAGCAACTTTAAAATCTGAACGG 96827 ||||| ||||| || | |||||||| || ||||| || | || || || ||| || Sbjct 33534 TTTTGTGGTTTCTGGAGAGCGGCCCATGGATCGTGGATGGACACCTTGAAGTCTTCTCGA 33593 Query 96828 CCCTGGCAAGAGCGTTGCAGCGCTTCAAAACTACC--GGGTATGGTTTTAAGGGCATCGT 96885 || |||||| ||||||| |||| ||||| || | | | || || | |||| Sbjct 33594 CCGCTGCAAGACCGTTGCAAAGCTTGGAAACTGCCTTCGATTTCCTTCAAACTG--TCGT 33651 Query 96886 TAAGGCCGTCGCCGCCACAAATGGGTATAAACCCGTACAACAAATGTGACAAGTTGGGCA 96945 | | ||| || || |||||||| || || |||||||| || | ||| | | ||| || | Sbjct 33652 TGATGCCATCTCCCCCACAAATTGGGATGAACCCGTATAAAAGATGCGTGAGGTTTGGAA 33711 Query 96946 GCGGCACTTTGTCCACCGGAAAGTTACGACCATACACGCCCCATTCCACAAAATACGCAG 97005 || | ||||||||| || || || || |||||| |||||||| || || || ||| Sbjct 33712 TTGGAATTTTGTCCACAGGGAACTTCCGGGGATACACACCCCATTCTACGAAGTAGGCAC 33771 Query 97006 CGA-TGGTTTT----GTCTTGGCGTCGGTTAGGTTTGTTATTCTCCCGCCAAATGTATTC 97060 ||| | |||| | || || | | || ||||| ||||| | | |||| || Sbjct 33772 CGACTACTTTTCCAGATGTTTGCTT--GAAGGGCTTGTTCTTCTCTCCCATGGTGTAATC 33829 Query 97061 CAGCGGGGACAGATGACCACCGTCCGTGTCCGCAAC 97096 ||| || | | || | |||||||||||| || || Sbjct 33830 CAGGGGTGGTAAGTGGCTACCGTCCGTGTCAGCTAC 33865 >seq504 Length=80497 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||||| | |||| ||| | |||||| ||||| || || || ||||||||||| | | Sbjct 74122 CCTCCTCTCAATCTCAATACTAAATGCAGAGTGGATTCTTTCTGGATGTTGTAGTCCGAC 74063 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | |||| |||||||| ||||| ||| | ||||| || |||||||| || Sbjct 74062 AGTGTACGGCCGTCTTCCAATTGCTTGCCGGCAAAGATAAGACGTTGTTGGTCAGGGGGA 74003 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||||||||||| ||||| |||||| | | | |||||| ||||| Sbjct 74002 ATCCCCTCTTTGTCTTGAATTTTGGCCTTCACATTTTCAATAGTGTCAGATGGCTCAACC 73943 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| |||||||| |||||||| || || || ||||| |||||||| Sbjct 73942 TCCAATGTGATGGTCTTTCCGGTGAGTGTCTTCACAAAGATCTGCAT 73896 Score = 111 bits (122), Expect = 1e-19 Identities = 161/222 (73%), Gaps = 8/222 (4%) Strand=Plus/Minus Query 16718 AGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTG 16777 || || ||||||| |||||| ||||| ||||| || ||||||||||||| | ||| | Sbjct 74341 AGTCTGAGTACCAAATGCAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGG 74282 Query 16778 GCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCT 16837 | || || | || ||||| ||| ||||||| ||||||||||| ||| | |||||| Sbjct 74281 CCATCTTCAAGCTGCTTGCCGGCAAAAATAAGTCGCTGTTGGTCAGGAGGAATCCCCTCT 74222 Query 16838 TTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCG--GGCTCCGTTTCCAC 16893 ||||| || || ||| ||||| | | || | ||| ||| ||||| ||||| Sbjct 74221 TTGTCTTGGATTTTAGCT--TTCACAT-TCTCA-ATTGTATCCGAAGGCTCAACTTCCAG 74166 Query 16894 GGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || || || || || || || |||||||| |||||||| Sbjct 74165 TGTAATAGTCTTGCCAGTGAGTGTCTTGACAAAGATCTGCAT 74124 Score = 104 bits (114), Expect = 2e-17 Identities = 162/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||||| | |||| || | |||||| ||||| ||||| || ||||||||||| | | Sbjct 73115 CCTCCTCTCAATCTCAACACTAAATGCAGAGTGGATTCCTTCTGGATGTTGTAGTCCGAC 73056 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | | || |||| |||||| ||||| | ||||| ||||||||||| || Sbjct 73055 AGTGTACGGCCATCTTCCAGTTGTTTACCCGCGAAGATAAGACGCTGTTGGTCAGGGGGA 72996 Query 16829 ACGCCCTCTTTGTCGGCAATTT--GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| ||||| ||||| ||| || || | | | |||||| ||||| Sbjct 72995 ATTCCCTCCTTGTCCTGAATTTTGGCT--TTGACATTCTCAATAGTGTCAGATGGCTCAA 72938 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 ||||| || || || || || || || || |||||||| ||||||||| Sbjct 72937 CTTCCAGTGTAATAGTCTTGCCAGTGAGTGTCTTGACAAAGATCTGCATT 72888 Score = 93.3 bits (102), Expect = 3e-14 Identities = 161/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||||| || | ||||| | |||| ||||||||||| || ||||| ||||||| Sbjct 72431 CCTCCTCTAAGACGAAGTACTAAGTGCAAGGTGGACTCCTTCTGAATGTTATAGTCGGAG 72372 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | | || |||||||| ||||| || | || | ||| |||||||| || Sbjct 72371 AGAGTGCGGCCATCTTCCAATTGCTTGCCAGCGAATATTAACCGTTGTTGGTCAGGGGGA 72312 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| ||||| || || || |||||| | | | |||||| ||||| Sbjct 72311 ATCCCCTCCTTGTCTTGGATCTTGGC--CTTCACATTCTCGATAGTGTCAGATGGCTCAA 72254 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938 |||| |||||||| || ||||| || || || ||||| |||||||| || Sbjct 72253 CCTCCAATGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATGTT 72202 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||||| | |||| || | |||||| ||||| || || || ||||||||||| | | Sbjct 72887 CCTCCTCTCAATCTCAACACTAAATGCAGAGTGGATTCTTTCTGAATGTTGTAGTCTGAC 72828 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | | || |||||||| ||||| ||| | ||||| || |||||||| ||| Sbjct 72827 AGTGTACGGCCATCTTCCAATTGCTTGCCGGCAAAGATAAGACGTTGTTGGTCAGGAGGA 72768 Query 16829 ACGCCCTCTTTGTCGGCAATTT--GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||||||||| ||||| ||| ||||| | | | || || ||||| Sbjct 72767 ATCCCCTCTTTGTCCTGAATTTTAGCT--TTCACATTTTCAATTGTATCCGATGGCTCAA 72710 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||| | || || || || || || || || || ||||| |||||||| Sbjct 72709 CTTCTAATGTAATAGTCTTGCCAGTGAGTGTCTTCACAAAGATCTGCAT 72661 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/202 (70%), Gaps = 4/202 (2%) Strand=Plus/Minus Query 16736 AGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGTTTG 16795 || || || ||||| || ||||||||||| | | ||| | | || |||||||| ||| Sbjct 73544 AGAGTTGATTCCTTCTGAATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAATTGCTTG 73485 Query 16796 CCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTTGCT 16853 || ||| | || | ||| |||||||| || | ||||| ||||| || || || Sbjct 73484 CCAGCAAATATTAACCGTTGTTGGTCAGGGGGAATCCCCTCCTTGTCTTGGATCTTGGC- 73426 Query 16854 GCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTCA 16913 |||||| | | | |||||| ||||| |||| |||||||| |||||||| | Sbjct 73425 -CTTCACATTCTCGATAGTGTCAGATGGCTCAACCTCCAATGTGATGGTCTTTCCGGTGA 73367 Query 16914 GCGTTTTGACAAAAATCTGCAT 16935 | || || ||||| |||||||| Sbjct 73366 GGGTCTTCACAAAGATCTGCAT 73345 Score = 86.0 bits (94), Expect = 5e-12 Identities = 162/234 (69%), Gaps = 12/234 (5%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || |||| ||| | ||||| | ||| || || || ||||| || ||||||||||||| Sbjct 73343 CCACCTCTTAGACGAAGTACTAAATGAAGAGTCGATTCCTTCTGGATGTTGTAGTCGGAG 73284 Query 16769 ATGGTTTTGGCGTCC----TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCAC 16824 | || |||||| || | || ||||| ||| | ||||| || |||||||| Sbjct 73283 AGAGT----GCGTCCATCTTCAAGCTGCTTGCCAGCAAAGATAAGACGTTGTTGGTCAGG 73228 Query 16825 AGGCACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCG--GGC 16882 ||| | ||| |||||||| ||||| |||| | | | || | ||| ||| ||| Sbjct 73227 AGGAATGCCTTCTTTGTCTTGAATTT-TGGCTTTAACATTCTCA-ATTGTATCCGATGGC 73170 Query 16883 TCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 || ||||| || || || || || || || || |||||||| ||||||||| Sbjct 73169 TCAACTTCCAGTGTAATAGTCTTGCCAGTGAGTGTCTTGACAAAGATCTGCATT 73116 >seq27819 Length=1354 Score = 123 bits (136), Expect = 2e-23 Identities = 166/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 |||||||| | || | ||| | |||||| ||||| ||||| || ||||||||||| | | Sbjct 1313 CCTCCTCGCAATCTTAATACTAAATGCAGAGTGGATTCCTTCTGGATGTTGTAGTCCGAC 1254 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | | || |||||||| ||||| ||| | ||||| || |||||||| || Sbjct 1253 AGTGTACGGCCATCTTCCAATTGCTTGCCGGCAAAGATAAGACGTTGTTGGTCAGGGGGA 1194 Query 16829 ACGCCCTCTTTGTCGGCAATTT--GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||||||||| ||||| ||| || || | | | |||||| || || Sbjct 1193 ATCCCCTCTTTGTCCTGAATTTTGGCT--TTGACATTCTCGATAGTGTCAGATGGTTCAA 1136 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||| |||||||| || ||||| || ||||||||||| |||||||| Sbjct 1135 CTTCCAAAGTGATGGTCTTCCCGGTGAGGGTTTTGACAAAGATCTGCAT 1087 Score = 109 bits (120), Expect = 4e-19 Identities = 163/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 |||||||| | |||| ||| | ||| || ||||| ||||| || ||||||||||||| Sbjct 857 CCTCCTCGCAATCTCAATACTAAATGAAGAGTGGATTCCTTCTGAATGTTGTAGTCGGAA 798 Query 16769 ATGGTTTTGGCGTCC----TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCAC 16824 | || |||||| || ||||| ||||| ||| ||||||| ||||||||||| Sbjct 797 AGAGT----GCGTCCATCTTCTAATTGCTTGCCGGCAAAAATAAGTCGCTGTTGGTCAGG 742 Query 16825 AGGCACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTC 16884 ||| | ||||||||||| |||| ||| || | | | ||||| ||||| Sbjct 741 AGGAATCCCCTCTTTGTCTTGGATTTTAGCCTTTACATTCTCAATTGTGTCTGATGGCTC 682 Query 16885 CGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||| | |||||||| || || || || || || ||||| |||||||| Sbjct 681 AACTTCTAATGTGATGGTCTTGCCAGTGAGTGTCTTCACAAAGATCTGCAT 631 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || |||| ||| | ||||| | ||| || || || ||||| || ||||||||||||| Sbjct 629 CCACCTCTTAGACGAAGTACTAAATGAAGTGTTGATTCCTTCTGGATGTTGTAGTCGGAG 570 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | || |||||||| ||||| ||| | ||||| ||||||||||| || Sbjct 569 AGGGTGCGGCCATCTTCCAATTGCTTGCCAGCAAAGATAAGACGCTGTTGGTCAGGGGGA 510 Query 16829 ACGCCCTCTTTGTCGGCAATTT--GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | || || ||||| ||||| ||| ||||| | | | ||||| ||||| Sbjct 509 ATTCCTTCCTTGTCCTGAATTTTAGCT--TTCACATTTTCAATTGTGTCCGATGGCTCAA 452 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||| | || || || || || || || || || || || |||||||| Sbjct 451 CTTCTAATGTAATAGTCTTGCCAGTAAGGGTCTTAACGAAGATCTGCAT 403 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 |||||||| | |||| ||| | ||||| ||||| || || || || || || |||| Sbjct 401 CCTCCTCGCAATCTCAATACTAAATGCAAAGTGGATTCTTTCTGGATATTATAATCGGAG 342 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | || ||||| || ||||| || | || || ||||| ||||| || Sbjct 341 AGGGTGCGGCCATCTTCCAACTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGGGGA 282 Query 16829 ACGCCCTCTTTGTCGGCAATTT--GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| ||||| ||||| ||| || || | | | || || || || Sbjct 281 ATTCCCTCCTTGTCCTGAATTTTGGCT--TTAACATTTTCAATTGTATCAGATGGTTCAA 224 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||| |||||||| || ||||| || ||||||||||| |||||||| Sbjct 223 CTTCCAAAGTGATGGTCTTCCCGGTGAGGGTTTTGACAAAGATCTGCAT 175 >seq397 Length=962699 Score = 114 bits (126), Expect = 1e-20 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | || |||| || || |||||||||||||| ||||||||||||| | Sbjct 56387 CCACCGCGAAGACGCAAAACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAC 56446 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | || |||| |||||| |||||| |||| | | ||| ||||| ||| Sbjct 56447 AGAGTGCGACCATCTTCCAGTTGTTTACCCGCAAAAATCAATCTCTGCTGGTCTGGAGGA 56506 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||| || ||||| || || || |||||| | | | |||||| || ||| Sbjct 56507 ATGCCTTCCTTGTCCTGGATCTTGGC--CTTCACATTTTCGATGGTGTCGGAAGGTTCCA 56564 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||| |||||||| |||||||| ||||| ||||| |||||||| Sbjct 56565 CCTCCAAGGTTATGGTTTTACCGGTCAGGGTTTTAACAAATATCTGCAT 56613 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | ||| |||| ||| || |||||||| || || ||||| ||||||| | Sbjct 56615 CCACCACGGAGACGCAGCACCAGATGAAGGGTGGACTCTTTCTGGATGTTATAGTCGGAC 56674 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | || |||| |||||| ||||| | ||||| ||||| ||||| || Sbjct 56675 AAAGTGCGACCATCTTCCAGTTGTTTACCCGCGAAGATAAGACGCTGCTGGTCTGGGGGA 56734 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||| |||||||| ||| | |||||| | | | ||||| || ||| Sbjct 56735 ATGCCTTCTTTGTCCTGAATCTTGGCCTTCACATTTTCAATGGTGTCAGAAGGTTCCACC 56794 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| |||||||||||| || ||||| ||||| ||||| |||||||| Sbjct 56795 TCCAAGGTGATGGTTTTACCAGTCAGGGTTTTAACAAAGATCTGCAT 56841 Score = 111 bits (122), Expect = 1e-19 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | ||| |||| ||| || |||||||| || || ||||| ||||| | | Sbjct 57527 CCACCACGGAGACGCAGCACCAGATGAAGGGTGGACTCTTTCTGGATGTTATAGTCAGAC 57586 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | || |||| |||||| ||||| | ||||| ||||| ||||| || Sbjct 57587 AAAGTGCGACCATCTTCCAGTTGTTTACCCGCGAAGATAAGACGCTGCTGGTCTGGGGGA 57646 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||| || ||||| || || || |||||| | | | ||||| |||||| Sbjct 57647 ATGCCTTCCTTGTCCTGGATCTTGGC--CTTCACATTTTCGATGGTGTCAGAAGGCTCCA 57704 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| |||||||||||| |||||||| ||||| ||||| |||||||| Sbjct 57705 CCTCCAAGGTGATGGTTTTACCGGTCAGGGTTTTAACAAAGATCTGCAT 57753 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | || ||||| ||| || |||||||| || || ||||| ||||||| | Sbjct 57299 CCACCACGGAGACGCAATACCAGATGAAGGGTGGACTCTTTCTGGATGTTATAGTCGGAC 57358 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | || || | |||||| || || | ||||| ||||| || || || Sbjct 57359 AATGTGCGCCCATCTTCTAGTTGTTTACCAGCGAAGATAAGTCGCTGCTGATCTGGGGGA 57418 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||| |||||||| ||| | |||||| | | | ||||| || ||| | Sbjct 57419 ATGCCTTCTTTGTCCTGAATCTTGGCCTTCACATTTTCAATGGTGTCAGAAGGTTCCACT 57478 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| |||||||||||| |||||||| ||||| ||||| |||||||| Sbjct 57479 TCCAAGGTGATGGTTTTACCGGTCAGGGTTTTAACAAAGATCTGCAT 57525 Score = 105 bits (116), Expect = 5e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | || |||| ||| || |||||||| || || ||||| ||||||| | Sbjct 57071 CCACCACGGAGACGCAACACCAGATGAAGGGTGGACTCTTTCTGGATGTTATAGTCGGAC 57130 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | || ||||||||||| ||||| | ||||| ||||| || || || Sbjct 57131 AAAGTGCGACCATCTTCCAATTGTTTACCCGCGAAGATAAGACGCTGCTGATCTGGGGGA 57190 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||| ||||| || || || |||||| | | | ||||||| || ||| Sbjct 57191 ATGCCCTCCTTGTCCTGGATCTTGGC--CTTCACATTTTCGATAGTGTCGGAAGGTTCCA 57248 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||| |||||||| || ||||| ||||| ||||| |||||||| Sbjct 57249 CCTCTAAGGTTATGGTTTTACCAGTCAGGGTTTTAACAAAGATCTGCAT 57297 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | || |||| ||| || ||||| || || || ||||| ||||| | | Sbjct 56843 CCACCACGGAGACGCAACACCAGATGAAGGGTGGATTCTTTCTGGATGTTATAGTCAGAC 56902 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | || ||||| ||||| || ||| |||| | | ||| ||||| ||| Sbjct 56903 AAAGTGCGACCATCTTCCAACTGTTTACCTGCAAAAATCAATCTCTGCTGGTCTGGAGGA 56962 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||| || ||||| || || || |||||| | | | |||||| || ||| Sbjct 56963 ATGCCTTCCTTGTCCTGGATCTTGGC--CTTCACATTTTCGATGGTGTCGGAAGGTTCCA 57020 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| |||||||||||| || ||||| ||||| ||||| |||||||| Sbjct 57021 CCTCCAAGGTGATGGTTTTACCAGTCAGGGTTTTAACAAAGATCTGCAT 57069 >seq222 Length=543901 Score = 91.5 bits (100), Expect = 1e-13 Identities = 100/132 (76%), Gaps = 6/132 (5%) Strand=Plus/Plus Query 29344 GGCGGCGTGGGGCTGAATCTAACGGGCGGCAACCACCTCGTTTTGTTGGAGCCGCACTGG 29403 ||||||||||||||||| | |||| ||||||||| | || |||| ||||||||| Sbjct 125755 GGCGGCGTGGGGCTGAACTTGTGCGGCGCCAACCACCTGCTGCTGCTGGACCCGCACTGG 125814 Query 29404 AACCCGCAGGTGGAGTTGCAGGCGCAGGGCCGCATCCACCGTTTGGGCCAGCGCAAACGC 29463 ||||||||| ||||| |||||||||| |||| | |||| | || ||| |||| Sbjct 125815 AACCCGCAGCTGGAGCGCCAGGCGCAGGACCGCGTGTACCGCGTCGGACAG-----ACGC 125869 Query 29464 GCGCACGTGTAC 29475 || |||||| || Sbjct 125870 GC-CACGTGCAC 125880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404940003251230