Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lerema_20accius_20[genbank_20GCA_5F001278395.1_202015-09-02] 29,977 sequences; 298,169,737 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq852 188 5e-43 seq504 127 1e-24 seq27819 116 2e-21 seq87 113 3e-20 seq397 104 2e-17 >seq852 Length=562639 Score = 188 bits (208), Expect = 5e-43 Identities = 586/898 (65%), Gaps = 27/898 (3%) Strand=Plus/Plus Query 5655 CGTGCACTCCGGACCACCCACGACCGTACATGGCTACACCCACAATTAGCTTCTTCGATT 5714 |||| || || | ||| ||||| |||||||| || ||||| || | | |||||||| | Sbjct 32896 CGTGAACACCAGTCCATCCACGTCCGTACATAGCAACACCAACTACGACCTTCTTCGGAT 32955 Query 5715 CGACGCTCTGATTTAACAGACGCTTGATTGAAAAATCTGTCGTGTATGTCTCGCCTGGGT 5774 ||| | ||| ||||| || | ||||| ||||||||||| || || | Sbjct 32956 TGACTCCTTGAGCTAACAAGTATTTAACACCGAAATCAGTCGTGTATGTTTCCTTAGGAT 33015 Query 5775 TCCACGATGGAGCGTACAGAGGTGTCTGGTGTCCCA--GATCCGTTAACGACCAGGCACC 5832 |||| | |||||||||||||| ||||||||| || | | |||| |||||| || || Sbjct 33016 TCCAGGCTGGAGCGTACAGAGATGTCTGGTGACCTAGGGTGTCGTT--CGACCACGCTCC 33073 Query 5833 CTTGTAGTCGTACGTCATAACAAAGATGTGATCAAGATACCTTTGTGCGCTGGCGTAGTC 5892 |||| ||||||| |||| | |||||||| || | || | ||||||| |||||| Sbjct 33074 CTTGAAGTCGTAGTTCATGAAGAAGATGTGGTCCATGTAGTTCTGTGCGCGACTGTAGTC 33133 Query 5893 GACAACGTCGATCTTGTCATGTCCCGCGCCGATAGCACTTGTCAATTGTAACCGTTTACC 5952 ||| || | |||||||| || || | |||||| || | | || || || Sbjct 33134 GACCACTTGAATCTTGTCCCAACCAGCACTGATAGCTGAAGTTAGCTCGTACTTCTTGCC 33193 Query 5953 -----CCGCTTCTCGCCCAACTCGTCAAGCATCACGCGAAGTTCCCGCAACAAAAGAGTG 6007 | | | | ||||||| |||||| | |||||||| || || || Sbjct 33194 AGTAGCAGATGAT-----AACTCGTTGAGCATCTCACGAAGTTCTTTCATTAAGAGCACA 33248 Query 6008 TACGTATTGCGGTCCACCTCGGCATTACCCAACACAGGATTAGCACCCTTTCCACCCGGA 6067 || || | || | ||| | | || | ||| ||||| ||||| || || || Sbjct 33249 TAGGTTTCGC---CATCCTTAGGACCGCCGAGGTTAGGGTTAGCGCCCTTGCCGCCAGGG 33305 Query 6068 AACTCCCAGTCAATGTCCACTCCGTCAAAGAACTTCCATGTCTCCAGAAACTCGCGGACA 6127 || ||||| || || || || || |||||||| ||||| ||| ||| || || || Sbjct 33306 AATTCCCAATCGATATCGACACCATCAAAGAATTTCCACGTCATCAGGAATTCCTTAACT 33365 Query 6128 CTTGTGACGAACACCTTACGTTTGGAGTCATCGT--TCATAAAATAA-AACGGATCGCTC 6184 ||||||| || | | | | | | | || ||| | || || || ||||| Sbjct 33366 GAATTGACGAA-ACGGTCCCTCTTCA--CTTTGTCATCAAAGAAGAAGAAAGGATCAGCA 33422 Query 6185 AACGTCCACCCCCCTATGGATGGTAGGACTGTCAACGAAGGGTTGTGACGTTTGATGGCC 6244 | ||||| || || || || || |||| | | || ||| || | || | | | Sbjct 33423 AGAGTCCAACCTCCAATAGACGGCAGGATTTTTAAGTCAGGTCTGGCTTGCTTCAATGAC 33482 Query 6245 ATCAGCTGGCCAAAGTTACCCTTGTACGCTTCGTTGTACGCCTCAACGCCTTTCTGTGGT 6304 ||||| || || ||||| |||||||| | ||| || | | | || || |||||| Sbjct 33483 ATCAGTTGACCGAAGTTGCCCTTGTAAGGTTCATTCCAAGATGATAATCCCTTTTGTGGT 33542 Query 6305 TTTTGCAACGCGGCCCAGATGTCGTGAATACTCACCTTGAAGTCATCGCGACCAGCGCAG 6364 || || | |||||||| ||||| || |||||||||||| || ||||| ||| Sbjct 33543 TTCTGGAGAGCGGCCCATGGATCGTGGATGGACACCTTGAAGTCTTCTCGACCGCTGCAA 33602 Query 6365 GATTTCTGTAGCGCCT--CAAAGGAATTGGGAATCTGCTTGAGGGCGTCGTTTATGCCGT 6422 || || | || | || | || | || | ||| | |||||| ||||| | Sbjct 33603 GACCGTTGCAAAGCTTGGAAACTGCCTTCG--ATTTCCTTCAAACTGTCGTTGATGCCAT 33660 Query 6423 TACCACCACAAATTGGAATGAACCCGTACAGCAGGTGCGTCAGATTAGGTATTGGTACCT 6482 || ||||||||||| ||||||||||| | || ||||| || || || ||||| | | Sbjct 33661 CTCCCCCACAAATTGGGATGAACCCGTATAAAAGATGCGTGAGGTTTGGAATTGGAATTT 33720 Query 6483 TGTCAATGGGAAACTGTCTGCCATACACTCCCCACTCCACGAAATACGCACCGACGAC 6540 |||| | || |||| | | |||||| ||||| || ||||| || |||||||| || Sbjct 33721 TGTCCACAGGGAACTTCCGGGGATACACACCCCATTCTACGAAGTAGGCACCGACTAC 33778 >seq504 Length=80497 Score = 127 bits (140), Expect = 1e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812 ||||||| ||||| ||||| || || || | ||| ||||||||||||||| ||||| | Sbjct 72889 TTCCTCCTCTCAATCTCAACACTAAATGCAGAGTGGATTCTTTCTGAATGTTGTAGTCTG 72830 Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872 | || | || |||| |||| || || |||||||| || || ||||| ||||| | | Sbjct 72829 ACAGTGTACGGCCATCTTCCAATTGCTTGCCGGCAAAGATAAGACGTTGTTGGTCAGGAG 72770 Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAA 34932 | | |||||| ||||| ||| || ||| || | | || | || | ||||| Sbjct 72769 GAATCCCCTCTTTGTCCTGAATTTTAGCTTTCACATTTTCAATTGTATCCGATGGCTCAA 72710 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || | || || || || || ||||| ||||||||||||||||||||| Sbjct 72709 CTTCTAATGTAATAGTCTTGCCAGTGAGTGTCTTCACAAAGATCTGCATA 72660 Score = 127 bits (140), Expect = 1e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||| ||||| ||||| || || || | ||| ||||||||| ||||| |||||||| Sbjct 74122 CCTCCTCTCAATCTCAATACTAAATGCAGAGTGGATTCTTTCTGGATGTTGTAGTCCGAC 74063 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || | || | || |||| || || |||||||| || || ||||| ||||| | || Sbjct 74062 AGTGTACGGCCGTCTTCCAATTGCTTGCCGGCAAAGATAAGACGTTGTTGGTCAGGGGGA 74003 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | |||||| ||||| ||| || || || | | || | ||| | |||||| Sbjct 74002 ATCCCCTCTTTGTCTTGAATTTTGGCCTTCACATTTTCAATAGTGTCAGATGGCTCAACC 73943 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || | || ||||| ||||| ||||| ||||||||||||||||||||| Sbjct 73942 TCCAATGTGATGGTCTTTCCGGTGAGTGTCTTCACAAAGATCTGCATA 73895 Score = 118 bits (130), Expect = 7e-22 Identities = 166/231 (72%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812 ||||||| ||||| ||||| || || || | ||| ||| ||||| ||||| ||||||| Sbjct 73117 TTCCTCCTCTCAATCTCAACACTAAATGCAGAGTGGATTCCTTCTGGATGTTGTAGTCCG 73058 Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872 | || | || |||| ||||| ||||| || || || || || || || ||||| | | Sbjct 73057 ACAGTGTACGGCCATCTTCCAGTTGTTTACCCGCGAAGATAAGACGCTGTTGGTCAGGGG 72998 Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTC 34930 | | ||||||||||| ||| || |||||| || || || | ||| | ||| Sbjct 72997 GAATTCCCTCCTTGTCCTGAATTTTGGCTTTGAC--ATTCTCAATAGTGTCAGATGGCTC 72940 Query 34931 AACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||| || | || || || || || ||||| ||||| |||||||||||||| Sbjct 72939 AACTTCCAGTGTAATAGTCTTGCCAGTGAGTGTCTTGACAAAGATCTGCAT 72889 Score = 116 bits (128), Expect = 2e-21 Identities = 144/195 (74%), Gaps = 4/195 (2%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| ||||||||||| ||||| || ||| | || |||| |||| || || || ||||| Sbjct 73536 TTCCTTCTGAATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAATTGCTTGCCAGCAAA 73477 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 ||||| ||||| ||||| | || | |||||||||||| ||||| || || | Sbjct 73476 TATTAACCGTTGTTGGTCAGGGGGAATCCCCTCCTTGTCTTGGATCTTGGCCTTCAC--A 73419 Query 34910 TGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTC 34967 | || || | ||| | |||||| || | || ||||| ||||| ||||| |||||| Sbjct 73418 TTCTCGATAGTGTCAGATGGCTCAACCTCCAATGTGATGGTCTTTCCGGTGAGGGTCTTC 73359 Query 34968 ACAAAGATCTGCATA 34982 ||||||||||||||| Sbjct 73358 ACAAAGATCTGCATA 73344 Score = 105 bits (116), Expect = 4e-18 Identities = 153/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 || ||||| | ||| || ||||||||||||||||| || || | || |||| ||| Sbjct 72413 ACTAAGTGCAAGGTGGACTCCTTCTGAATGTTATAGTCGGAGAGAGTGCGGCCATCTTCC 72354 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 | || || || || ||||||| ||||| ||||| | || | |||||||||||| Sbjct 72353 AATTGCTTGCCAGCGAATATTAACCGTTGTTGGTCAGGGGGAATCCCCTCCTTGTCTTGG 72294 Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950 ||||| || || || || || | ||| | |||||| || | || ||||| | Sbjct 72293 ATCTTGGCCTTCAC--ATTCTCGATAGTGTCAGATGGCTCAACCTCCAATGTGATGGTCT 72236 Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 | || ||||| |||||||||||||||||||| || Sbjct 72235 TGCCGGTGAGGGTCTTCACAAAGATCTGCATGTT 72202 Score = 98.7 bits (108), Expect = 6e-16 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||| |||| | | || || |||| ||| ||| ||||| || || ||||| || Sbjct 72659 CCTCCTCTCAGACGAAGTACTAAATGAAGAGTGGATTCCTTCTGGATATTGTAGTCGGAG 72600 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || | ||| |||| ||||| ||||| ||||| || || || || |||||||| | || Sbjct 72599 AGAGTGCGTCCATCTTCCAGTTGTTTACCGGCGAAGATAAGACGCTGCTGGTCAGGGGGA 72540 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAA 34932 | || |||||||| ||| || |||||| || || || | || | ||||| Sbjct 72539 ATTCCTTCCTTGTCCTGAATTTTGGCTTTGAC--ATTCTCGATAGTGTCGGATGGCTCAA 72482 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || | || || || || || ||||| ||||| ||||||||||||||| Sbjct 72481 CTTCCAGTGTAATAGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATA 72432 Score = 84.2 bits (92), Expect = 1e-11 Identities = 136/194 (70%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| ||||| ||||| ||||| || || | ||| |||| || ||||| || || ||||| Sbjct 73308 TTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGTCCATCTTCAAGCTGCTTGCCAGCAAA 73249 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || ||||| ||||| | || | || || ||||| ||| || ||| || | Sbjct 73248 GATAAGACGTTGTTGGTCAGGAGGAATGCCTTCTTTGTCTTGAATTTTGGCTTTAAC--A 73191 Query 34910 TGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTC 34967 | || || | || | |||||| || | || || || || || ||||| ||||| Sbjct 73190 TTCTCAATTGTATCCGATGGCTCAACTTCCAGTGTAATAGTCTTGCCAGTGAGTGTCTTG 73131 Query 34968 ACAAAGATCTGCAT 34981 |||||||||||||| Sbjct 73130 ACAAAGATCTGCAT 73117 >seq27819 Length=1354 Score = 116 bits (128), Expect = 2e-21 Identities = 165/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||| | ||| ||||| || || |||| ||| ||| ||||||||||| ||||| ||| Sbjct 857 CCTCCTCGCAATCTCAATACTAAATGAAGAGTGGATTCCTTCTGAATGTTGTAGTCGGAA 798 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || | ||| |||| || | || || |||||||| || ||||| || ||||| | || Sbjct 797 AGAGTGCGTCCATCTTCTAATTGCTTGCCGGCAAAAATAAGTCGCTGTTGGTCAGGAGGA 738 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAA 34932 | |||||| ||||| || || || || || || || | || | ||||| Sbjct 737 ATCCCCTCTTTGTCTTGGATTTTAGCCTTTAC--ATTCTCAATTGTGTCTGATGGCTCAA 680 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || | || ||||| || || ||||| ||||||||||||||||||||| Sbjct 679 CTTCTAATGTGATGGTCTTGCCAGTGAGTGTCTTCACAAAGATCTGCATA 630 Score = 107 bits (118), Expect = 1e-18 Identities = 163/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||| | ||| || || || || || | ||| ||| ||||| ||||| |||||||| Sbjct 1313 CCTCCTCGCAATCTTAATACTAAATGCAGAGTGGATTCCTTCTGGATGTTGTAGTCCGAC 1254 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || | || |||| |||| || || |||||||| || || ||||| ||||| | || Sbjct 1253 AGTGTACGGCCATCTTCCAATTGCTTGCCGGCAAAGATAAGACGTTGTTGGTCAGGGGGA 1194 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAA 34932 | |||||| ||||| ||| || |||||| || || || | ||| | |||| Sbjct 1193 ATCCCCTCTTTGTCCTGAATTTTGGCTTTGAC--ATTCTCGATAGTGTCAGATGGTTCAA 1136 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || | || ||||| || || ||||| || || ||||||||||||||| Sbjct 1135 CTTCCAAAGTGATGGTCTTCCCGGTGAGGGTTTTGACAAAGATCTGCATA 1086 Score = 105 bits (116), Expect = 4e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||| | ||| ||||| || || || | ||| ||||||||| || ||||| || || Sbjct 401 CCTCCTCGCAATCTCAATACTAAATGCAAAGTGGATTCTTTCTGGATATTATAATCGGAG 342 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | || |||| |||| ||| || || || || || || || |||||||| | || Sbjct 341 AGGGTGCGGCCATCTTCCAACTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGGGGA 282 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||||||||||| ||| || ||| || | | || | ||| | ||||| Sbjct 281 ATTCCCTCCTTGTCCTGAATTTTGGCTTTAACATTTTCAATTGTATCAGATGGTTCAACT 222 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || | || ||||| || || ||||| || || ||||||||||||||| Sbjct 221 TCCAAAGTGATGGTCTTCCCGGTGAGGGTTTTGACAAAGATCTGCATA 174 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||||||||| || ||||| || || ||| | || |||| |||| ||| || || || || Sbjct 1050 TTCTTTCTGGATATTATAATCGGAGAGGGTGCGGCCATCTTCCAACTGCTTGCCAGCGAA 991 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || || |||||||| | || | ||||||||||| ||| || ||| || Sbjct 990 GATGAGACGCTGCTGGTCAGGGGGAATTCCCTCCTTGTCCTGAATTTTGGCTTTAACATT 931 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | | || | ||| | ||||| || | || ||||| || || ||||| ||||| || Sbjct 930 TTCAATTGTATCAGATGGTTCAACTTCCAAAGTGATGGTCTTCCCGGTGAGGGTCTTAAC 871 Query 34970 AAAGATCTGCATA 34982 |||||||||||| Sbjct 870 GAAGATCTGCATA 858 Score = 86.0 bits (94), Expect = 4e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||| | ||| ||||| || || |||| || ||| ||||| ||||| |||||||| Sbjct 173 CCTCCTCGCAATCTCAATACTAAATGAAGAGTTGATTCCTTCTGGATGTTGTAGTCCGAG 114 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | || |||| || | || || |||||||| || || || |||||||| | || Sbjct 113 AGGGTGCGGCCATCTTCTAATTGCTTGCCGGCAAAGATAAGACGCTGCTGGTCAGGGGGA 54 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGAC 34906 | ||||||||||| ||| || |||||| Sbjct 53 ATTCCCTCCTTGTCCTGAATTTTGGCTTTGAC 22 >seq87 Length=431742 Score = 113 bits (124), Expect = 3e-20 Identities = 162/225 (72%), Gaps = 5/225 (2%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || || ||||||||||| ||||| ||||| | || |||| ||| Sbjct 313617 ACCAAGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCAGAAAGAGTGCGACCATCTTCC 313558 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || ||||| || || || || |||||||| | || | ||||| ||||| Sbjct 313557 AGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGAGGAATGCCCTCTTTGTCCTGG 313498 Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950 ||||| || || || || || | ||| |||||| || |||| ||| || || | Sbjct 313497 ATCTTGGCCTTCAC--ATTCTCGATGGTGTCAGAGGCCTCCACCTCGAGGGTGATTGTCT 313440 Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCATATTCGTAGACTTGT 34995 ||||||| || |||||||| ||||| ||||| || || || |||| Sbjct 313439 TTCCCGTTAGGGTCTTCACGAAGATTTGCATTTTGGT-GATTTGT 313396 >seq397 Length=962699 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||| | ||||| ||| |||||| ||||| || ||||| ||||| | ||| | || || Sbjct 58228 AACAAGGTGAAGTGTAGATTCTTTTTGAATATTGTAGTCTGAAAGTGTACGTCCGTCTTC 58287 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||| ||||| || || || || |||||||| ||| | || | || |||||||| Sbjct 58288 GAGCTGCTTTCCTGCGAAGATCAGGCGTTGCTGATCTGGGGGAATACCTTCCTTGTCTTG 58347 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 |||||| || ||| | | || | ||| | ||| || || | ||| || ||||| Sbjct 58348 AATCTTAGCCTTCACGTTTTCGATGGTATCAGACGGCTCCACCTCAAGGGTAATAGTTTT 58407 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || ||||| || || || ||||||||||| Sbjct 58408 ACCAGTGAGGGTTTTTACGAAGATCTGCAT 58437 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| |||| ||| |||||||| ||||||||||| || | | || |||| ||| Sbjct 57545 ACCAGATGAAGGGTGGACTCTTTCTGGATGTTATAGTCAGACAAAGTGCGACCATCTTCC 57604 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 || ||||| || || || || || || ||||||||| | || | || |||||||| Sbjct 57605 AGTTGTTTACCCGCGAAGATAAGACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGG 57664 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| || || | | || | ||| | ||| || || | ||| |||||||| Sbjct 57665 ATCTTGGCCTTCACATTTTCGATGGTGTCAGAAGGCTCCACCTCCAAGGTGATGGTTTTA 57724 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || || || || |||||||||||||| Sbjct 57725 CCGGTCAGGGTTTTAACAAAGATCTGCAT 57753 Score = 89.7 bits (98), Expect = 3e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| |||| ||| |||||||| ||||||||||| || | | || |||| ||| Sbjct 56633 ACCAGATGAAGGGTGGACTCTTTCTGGATGTTATAGTCGGACAAAGTGCGACCATCTTCC 56692 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 || ||||| || || || || || || ||||||||| | || | || || ||||| | Sbjct 56693 AGTTGTTTACCCGCGAAGATAAGACGCTGCTGGTCTGGGGGAATGCCTTCTTTGTCCTGA 56752 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| || || | | || | ||| | || || || | ||| |||||||| Sbjct 56753 ATCTTGGCCTTCACATTTTCAATGGTGTCAGAAGGTTCCACCTCCAAGGTGATGGTTTTA 56812 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || || || || |||||||||||||| Sbjct 56813 CCAGTCAGGGTTTTAACAAAGATCTGCAT 56841 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 ||| |||| |||| ||| |||||||| ||||||||||| || | | || |||| Sbjct 57313 CAATACCAGATGAAGGGTGGACTCTTTCTGGATGTTATAGTCGGACAATGTGCGCCCATC 57372 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || || ||||| || || || || ||||| ||||| ||| | || | || || ||||| Sbjct 57373 TTCTAGTTGTTTACCAGCGAAGATAAGTCGCTGCTGATCTGGGGGAATGCCTTCTTTGTC 57432 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 |||||| || || | | || | ||| | || || || | ||| ||||| Sbjct 57433 CTGAATCTTGGCCTTCACATTTTCAATGGTGTCAGAAGGTTCCACTTCCAAGGTGATGGT 57492 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||| || || || || || |||||||||||||| Sbjct 57493 TTTACCGGTCAGGGTTTTAACAAAGATCTGCAT 57525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324514996838856