Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lerema_20accius_20[genbank_20GCA_5F001278395.1_202015-09-02] 29,977 sequences; 298,169,737 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq3623 174 1e-37 seq12020 161 8e-34 seq397 132 4e-25 seq307 125 6e-23 seq504 123 2e-22 seq2000 122 7e-22 seq467 118 9e-21 seq491 102 7e-16 seq27819 98.7 8e-15 >seq3623 Length=95795 Score = 174 bits (192), Expect = 1e-37 Identities = 398/588 (68%), Gaps = 12/588 (2%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 |||||| || || ||||||||||| || ||| |||||||| ||||||||| |||| || Sbjct 55850 AGCTATTGGAATTGATTTAGGAACGACGTATTCATGTGTTGGAGTTTGGCAACATGGAAA 55791 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 || ||||| ||||| || || ||||| ||| ||||||| ||||| || || | || || Sbjct 55790 CGTGGAAATCATTGCTAACGACCAAGGCAACCGAACTACACCATCATACGTGGCCTTTAC 55731 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 || || || | | | || ||||| || || | |||| || ||||| | ||| Sbjct 55730 AGACACGGAGCGGCTGATAGGCGATGCTGCGAAGAACCAAGTGGCTTTAAATCCCAGCAA 55671 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 ||| | || || || ||||| |||| || | | ||| | ||| | | | || Sbjct 55670 TACAGTGTTCGACGCGAAACGGCTAATCGGTCGCAAATTTGACGATCCCAAGATACAACA 55611 Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAG- 550289 || ||| | || ||||| ||| | | || | | | ||| ||||| | || ||| Sbjct 55610 GGACATGCAACACTGGCCCTTCAAGGTAGTGAGCGACTGTGGCAAACCAAAAATACAAGT 55551 Query 550290 -CTACTCATGAAGGATCTGTTAAACA-ATTTTCACCAGAACAAAT-TTCATCTATGGTTT 550346 | ||| ||||| | ||| | || |||| || |||| || | ||||| Sbjct 55550 AGAATTCA--AAGGA-GAGACAAAGAGGTTCGCACCGGAGGAAATCAGCAGC-ATGGTAC 55495 Query 550347 TAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGT-TACG-GATGCAGT 550404 ||| ||| |||||| | || || || || | || || ||| | || ||||| || Sbjct 55494 TAACGAAGATGAAAGAGACCGCGGAGGCGTTCCTCGG--CAGCAGTGTGCGCGATGCTGT 55437 Query 550405 AATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACG 550464 || || || || |||||||| || ||||||||||| ||||| || || ||||| || Sbjct 55436 GATCACGGTTCCTGCATATTTCAACGACTCACAACGACAAGCCACCAAGGATGCAGGTGC 55377 Query 550465 TATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATA 550524 ||||| || || || ||||| ||||| ||||| ||||||||||| || ||||| || || Sbjct 55376 CATTGCAGGCCTCAACGTTCTGCGTATCATCAACGAACCTACTGCAGCCGCACTCGCCTA 55317 Query 550525 TGGACTTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGA 550572 || || || || || | | || | || ||||||||||| || Sbjct 55316 CGGTCTGGACAAGAATCTTAAAGGCGAGCGCAACGTACTCATCTTCGA 55269 >seq12020 Length=583 Score = 161 bits (178), Expect = 8e-34 Identities = 335/493 (68%), Gaps = 8/493 (2%) Strand=Plus/Minus Query 549996 TAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTG 550055 ||||||| ||||| || ||||| || ||||| || || | ||| |||| ||||| | Sbjct 489 TAGGTATTGATTTGGGTACCACGTACTCGTGTGTGGGCGTGTTCCAACATGGGAAAGTGG 430 Query 550056 AAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAA 550115 |||| || ||||| || || || ||||| || || || |||||||| | ||||| || | Sbjct 429 AAATCATCGCCAACGACCAGGGCAACAGGACCACGCCCTCTTATGTGGCGTTCACCGACA 370 Query 550116 CTGAACATTTAGTTGGTGATGCAGCAAAATATCAAG---CCACTGGTAATCCTACCAATA 550172 | || | | | | || ||||| || || | || | ||| || || || | ||| | Sbjct 369 CCGAGCGTCTCATCGGCGATGCCGCCAAGAACCAGGTGGCCA-TG--AACCCCAACAACA 313 Query 550173 CTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAG 550232 | || || ||||| |||||| | || || | | || | || | |||||||| |||| Sbjct 312 CCATCTTCGATGCCAAACGTCTTATCGGTCGCAAATTCGAAGACGCCACTGTTCAAGCAG 253 Query 550233 ATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTA 550292 | |||||||| ||||| ||| | | || | || | ||| ||||| | || | | | Sbjct 252 ACATGAAGCACTGGCCATTCGAGGTAGTCAGTGATGGTGGGAAACCAAAGATCAAGGTTT 193 Query 550293 CTCATGAAGGATCTGTTAA-ACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATG 550351 | || ||||| | ||| ||| | ||| || ||| || | || ||||| | | Sbjct 192 CATATAAAGGAGAGGATAAGACATTCTTC-CCTGAAGAAGTAAGCTCAATGGTGCTTACA 134 Query 550352 AAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACT 550411 |||||||| ||||||| |||| |||| || || ||||||| || || Sbjct 133 AAAATGAAGGAAACAGCTGAGGCTTACCTTGGCAAAACTGTGCAAAATGCAGTCATTACG 74 Query 550412 GTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCT 550471 || ||||| || || ||||||||||| || || || ||||||||||| || ||| || Sbjct 73 GTTCCAGCGTACTTCAATGACTCACAGCGACAGGCCACTAAAGATGCGGGTACCATTTCT 14 Query 550472 GGACTTAATGTTC 550484 || || || |||| Sbjct 13 GGCCTGAACGTTC 1 >seq397 Length=962699 Score = 132 bits (146), Expect = 4e-25 Identities = 163/223 (73%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 563266 ACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCA 563325 || || ||||| ||| |||||| |||||||||||| | ||||| | | ||||| Sbjct 58457 ACGAGGTGAAGAGTAGATTCTTTTTGAATATTGTAATCCGAAAGAGTACGTCCGTCTTCT 58516 Query 563326 AGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGA 563385 | ||| || || || ||||| | || ||||||||||| || || ||||| || |||||| Sbjct 58517 AATTGCTTGCCCGCGAAAATCAATCGCTGCTGATCAGGTGGTATGCCTTCCTTGTCTTGA 58576 Query 563386 ATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTTTA 563445 |||||| |||||| ||||||||||| | | | ||| | || | ||||||| Sbjct 58577 ATTTTTGCTTTTACATTTTCAATTGTATCGGATGGCTCAACTTCCAAGGTGATAGTTTTA 58636 Query 563446 CCAGTAAGAGTTTTAACGAAAATTTGCATAGACATCTTGGTTA 563488 ||||| | |||||| || ||||||||||| | || |||| || Sbjct 58637 CCAGTTAAAGTTTTCACAAAAATTTGCATTGTGATTTTGGATA 58679 Score = 123 bits (136), Expect = 2e-22 Identities = 161/220 (73%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 |||||| | ||| | |||||| ||| |||||| || ||||| || | | ||| | Sbjct 57991 GAGACGTAATACTAAATGAAGAGTAGATTCTTTCTGGATGTTGTAGTCTGACAAAGTGCG 58050 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 |||||| | ||| || || ||||| || |||||||| || || || ||||| || || Sbjct 58051 CCCATCTTCCAATTGCTTACCAGCAAATATCAGTCTTTGTTGGTCTGGTGGAATACCCTC 58110 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAG 563434 ||| ||||||||||| |||||| || || || |||| | | || ||||||| Sbjct 58111 TTTGTCTTGAATTTTAGCTTTTACATTTTCTATGGTGTCAG-AAGGCTCCACCTCGAGAG 58169 Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||| |||||||| || ||||||||||||||||| ||||| Sbjct 58170 TAATGGTTTTACCGGTGAGAGTTTTAACGAAAATCTGCAT 58209 Score = 113 bits (124), Expect = 4e-19 Identities = 158/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| || ||||| ||||| ||| |||||| ||||||||| || | || || | | Sbjct 58220 AGACGTAGAACAAGGTGAAGTGTAGATTCTTTTTGAATATTGTAGTCTGAAAGTGTACGT 58279 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||||| || || ||||| || || || || | ||||||||| || ||||| ||||| Sbjct 58280 CCGTCTTCGAGCTGCTTTCCTGCGAAGATCAGGCGTTGCTGATCTGGGGGAATACCTTCC 58339 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACAT-TCGAGAGT 563435 || |||||||| || || || || || ||||||| | | || || || || Sbjct 58340 TTGTCTTGAATCTTAGCCTTCACGTTTTCGATGGTATCAGACGGC-TCCACCTCAAGGGT 58398 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || |||||||||||| || ||||| ||||| || ||||| Sbjct 58399 AATAGTTTTACCAGTGAGGGTTTTTACGAAGATCTGCAT 58437 Score = 91.5 bits (100), Expect = 1e-12 Identities = 156/222 (70%), Gaps = 6/222 (3%) Strand=Plus/Plus Query 563256 GAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 |||||| | ||| ||||||||||| ||| | | ||| || || || || | | || Sbjct 57307 GAGACGCAATACCAGATGAAGGGTGGACTCTTTCTGG--ATGTTATAGTCGGACAATGTG 57364 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | |||||| |||||||| || || || ||||||| |||||||| || ||||| ||| Sbjct 57365 CGCCCATCTTCTAGTTGTTTACCAGCGAAGATAAGTCGCTGCTGATCTGGGGGAATGCCT 57424 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAG 563432 ||||| || ||||| || || || ||||| || |||| | | || ||| | Sbjct 57425 TCTTTGTCCTGAATCTTGGCCTTCACATTTTCAATGGTGTCAG-AAGGTTCCACTTCCAA 57483 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || | |||||||| || || |||||||| || || ||||| Sbjct 57484 GGTGATGGTTTTACCGGTCAGGGTTTTAACAAAGATCTGCAT 57525 Score = 86.0 bits (94), Expect = 5e-11 Identities = 155/222 (70%), Gaps = 6/222 (3%) Strand=Plus/Plus Query 563256 GAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 |||||| || || ||||||||||| ||| | | ||| || || || || | | ||| Sbjct 56623 GAGACGCAGCACCAGATGAAGGGTGGACTCTTTCTGG--ATGTTATAGTCGGACAAAGTG 56680 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | |||||| |||||||| || || || ||||| | ||||| || || ||||| ||| Sbjct 56681 CGACCATCTTCCAGTTGTTTACCCGCGAAGATAAGACGCTGCTGGTCTGGGGGAATGCCT 56740 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAG 563432 ||||| || ||||| || || || ||||| || |||| | | || || | Sbjct 56741 TCTTTGTCCTGAATCTTGGCCTTCACATTTTCAATGGTGTCAG-AAGGTTCCACCTCCAA 56799 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || | ||||||||||| || |||||||| || || ||||| Sbjct 56800 GGTGATGGTTTTACCAGTCAGGGTTTTAACAAAGATCTGCAT 56841 Score = 86.0 bits (94), Expect = 5e-11 Identities = 155/222 (70%), Gaps = 6/222 (3%) Strand=Plus/Plus Query 563256 GAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 |||||| || || ||||||||||| ||| | ||| || || || |||| | ||| Sbjct 57763 GAGACGCAGCACTAGATGAAGGGTGGACTCCTTCTGG--ATGTTATAGTCAGACAAAGTG 57820 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | |||||| | ||||| || || ||||| | ||| |||||||| |||||||| ||| Sbjct 57821 CGACCATCTTCCAACTGTTTACCTGCGAAAATCAATCTCTGCTGATCTGGAGGAATGCCT 57880 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAG 563432 ||||| || || || || || || |||||| ||||| | ||| | | ||| | Sbjct 57881 TCTTTGTCCTGGATCTTGGCCTTCACATTCTCAATAGTATCCG-ATGACTCAACTTCTAA 57939 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || | ||||| ||||| | ||| || || || || ||||| Sbjct 57940 GGTTATTGTTTTGCCAGTTAAAGTCTTTACAAAGATCTGCAT 57981 >seq307 Length=347671 Score = 125 bits (138), Expect = 6e-23 Identities = 341/520 (66%), Gaps = 13/520 (3%) Strand=Plus/Plus Query 550026 GTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAA 550085 |||| ||||||| | ||||| || ||||| ||||| ||||| || |||||| | | Sbjct 117057 GTGTGGGTGTTTACAAGAATGGACGCGTGGAAATCATTGCTAATGACCAGGGTAACCGTA 117116 Query 550086 CTACTCCATCTTATGTTTCTTTCACGG---AAACTGAACATTTAGTTGGTGATGCAGCAA 550142 || || || ||||| ||||||| | || || | | || | ||||| || || | Sbjct 117117 TCACCCCCTCATATGTGGCTTTCACTGCTGAAGGCGAGCGTCTAATCGGTGACGCCGCCA 117176 Query 550143 AATATCAAGCCACTGGTAATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAA 550202 | |||| || || ||| ||||| | ||||||||||||||| | ||||| Sbjct 117177 AGAATCAGCTTACCACAAACCCTGAGAATACAGTCTTTGATGCTAAACGTCTCATTGGTC 117236 Query 550203 GAAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAGCATTGGCCTTTCCAAATTGTTA 550262 | | | |||||| ||||| || || | ||| | || ||| | ||||| Sbjct 117237 GTGAATGGACTGATTCCACTGTCCAACACGACGTTAAGTTCTTCCCCTTCAAGGTTGTTG 117296 Query 550263 ATGTTTCTGGAAAACCTTATATTGAAGCTAC-TCATGAAGGATCTGTTAAACAA----TT 550317 | | |||||| || | || | ||| || | || | | |||| || Sbjct 117297 AAAAGAACAGCAAACCTCATGT-----CTCCGTCAAGACAGCTCAGGGAGACAAGATCTT 117351 Query 550318 TTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTT 550377 |||| ||| |||| || | |||||||| | || ||||| |||| || |||| Sbjct 117352 CGCACCTGAAGAAATCTCCGCCATGGTTTTGACTAAGATGAAGGAAACCGCAGAGGCTTA 117411 Query 550378 TGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACA 550437 | | || | |||| || |||| || |||| || || || ||||| || ||| | || Sbjct 117412 TCTCGGAAAGAAAGTCACCCATGCCGTCGTAACCGTTCCCGCTTATTTCAACGACGCTCA 117471 Query 550438 ACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAA 550497 ||||||||| ||||||||||| || ||| || || |||||||| | | || ||||| Sbjct 117472 ACGTCAAGCCACTAAAGATGCGGGTGTTATCGCCGGTCTTAATGTCATGAGAATCATCAA 117531 Query 550498 TGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAAA 550537 || ||||| ||||| || |||| ||||| || || ||| Sbjct 117532 CGAGCCTACCGCTGCCGCCATTGCTTATGGTCTCGACAAA 117571 >seq504 Length=80497 Score = 123 bits (136), Expect = 2e-22 Identities = 160/221 (72%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 || ||||| ||||| | |||||| || ||| || || ||||| || | ||||| Sbjct 73337 CTTAGACGAAGTACTAAATGAAGAGTCGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTG 73278 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | | ||||||||| || || || ||||| ||||| | ||| || ||||||||||| ||| Sbjct 73277 CGTCCATCTTCAAGCTGCTTGCCAGCAAAGATAAGACGTTGTTGGTCAGGAGGAATGCCT 73218 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGA 563433 ||||| ||||||||||| ||| || |||||||||||| | | | ||| || Sbjct 73217 TCTTTGTCTTGAATTTTGGCTTTAACATTCTCAATTGTATCCGATGGCTCAACTTCCAGT 73158 Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 |||| ||| || ||||| || || || || || || ||||| Sbjct 73157 GTAATAGTCTTGCCAGTGAGTGTCTTGACAAAGATCTGCAT 73117 Score = 113 bits (124), Expect = 4e-19 Identities = 158/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 || ||||| ||||| | |||||| || ||| || |||||||| || | ||||| Sbjct 72653 CTCAGACGAAGTACTAAATGAAGAGTGGATTCCTTCTGGATATTGTAGTCGGAGAGAGTG 72594 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | | |||||| |||||||| ||||| || ||||| | ||||| ||||| ||||||||| Sbjct 72593 CGTCCATCTTCCAGTTGTTTACCGGCGAAGATAAGACGCTGCTGGTCAGGGGGAATTCCT 72534 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGA 563433 || || || |||||||| ||| || ||| || || || | | | ||| || Sbjct 72533 TCCTTGTCCTGAATTTTGGCTTTGACATTCTCGATAGTGTCGGATGGCTCAACTTCCAGT 72474 Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 |||| ||| || ||||| || || || || || || |||||| Sbjct 72473 GTAATAGTCTTGCCAGTGAGGGTCTTGACAAAGATCTGCATA 72432 Score = 109 bits (120), Expect = 4e-18 Identities = 158/223 (71%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 563253 CCTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGT 563312 ||| || | |||||| | ||| || || ||| || || ||||| || | || || Sbjct 74345 CCTAAGTCTGAGTACCAAATGCAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGGGT 74286 Query 563313 TCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCC 563372 | ||||||||| || || |||||||||||||||| || || ||||||||||| || Sbjct 74285 GCGGCCATCTTCAAGCTGCTTGCCGGCAAAAATAAGTCGCTGTTGGTCAGGAGGAATCCC 74226 Query 563373 TTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAG 563432 ||||| ||||| ||||| ||| || |||||||||||| | | | ||| || Sbjct 74225 CTCTTTGTCTTGGATTTTAGCTTTCACATTCTCAATTGTATCCGAAGGCTCAACTTCCAG 74166 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 |||| ||| || ||||| || || || || || || |||||| Sbjct 74165 TGTAATAGTCTTGCCAGTGAGTGTCTTGACAAAGATCTGCATA 74123 Score = 91.5 bits (100), Expect = 1e-12 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 563283 TTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAA 563342 |||||| ||| ||||| || | || || | |||||| | ||| || |||||||| Sbjct 72852 TTCTTTCTGAATGTTGTAGTCTGACAGTGTACGGCCATCTTCCAATTGCTTGCCGGCAAA 72793 Query 563343 AATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGC 563402 ||||| | ||| || ||||||||||| || ||||| || |||||||| ||| || Sbjct 72792 GATAAGACGTTGTTGGTCAGGAGGAATCCCCTCTTTGTCCTGAATTTTAGCTTTCACATT 72733 Query 563403 CTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAAC 563462 ||||||||||| | | | ||| | |||| ||| || ||||| || || || || Sbjct 72732 TTCAATTGTATCCGATGGCTCAACTTCTAATGTAATAGTCTTGCCAGTGAGTGTCTTCAC 72673 Query 563463 GAAAATTTGCATA 563475 || || |||||| Sbjct 72672 AAAGATCTGCATA 72660 >seq2000 Length=256777 Score = 122 bits (134), Expect = 7e-22 Identities = 193/275 (70%), Gaps = 4/275 (1%) Strand=Plus/Plus Query 550310 AAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCC 550369 ||||| |||||||| ||| ||||||| || ||||| | | ||||||||| | | ||| Sbjct 38822 AAACATTTTTCACCTGAAGAAATTTCTTCCATGGTCCTGACGAAAATGAAGGAGATTGCC 38881 Query 550370 AGTGCTTTTGTTGGTCAAGAA--GTTACGGATGCAGTAATAACTGTACCAGCATATTTTA 550427 | | | || | | | |||| |||||||| || || || |||||||| || | Sbjct 38882 GAAACCTACCTGGG--AGGGACTGTTAAAGATGCAGTGATTACCGTTCCAGCATACTTCA 38939 Query 550428 ATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTC 550487 |||| | |||||||||||||| || ||||| || || || | | || ||| | Sbjct 38940 ATGATGCCCAACGTCAAGCTACAAAGGATGCAGGCGCAATAGCAGCTTTGAACGTTTTGA 38999 Query 550488 GTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAAACATAATGATC 550547 | ||||| |||||||| |||||||| || || || |||||||| |||||| || | Sbjct 39000 GAATTATTAATGAACCAACTGCTGCAGCGCTAGCTTATGGACTGGATAAAGATTTAAAAG 39059 Query 550548 AAGAACTTAATGTACTCATCTTTGATTGTGGAGGT 550582 ||| |||||||| ||||| ||| |||||| Sbjct 39060 GAGACAAAAATGTACTGATCTTCGATCTCGGAGGT 39094 Score = 95.1 bits (104), Expect = 1e-13 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 361703 AGACCATAAGCTAATGAAGCAGCTGTTGGTTCGTTAATTATTTTAATAACATTGAGTCCC 361762 || |||||||||| | ||||| |||||||| ||||| ||| | | ||| || | | Sbjct 39042 AGTCCATAAGCTAGCGCTGCAGCAGTTGGTTCATTAATAATTCTCAAAACGTTCAAAGCT 38983 Query 361763 GCTATTTTTGATGCATCTAAAGTGGCTTGACGTTGTGCATCATTAAAATATGCAGGAACA 361822 |||||| |||||| || ||||||||||| |||||||| || ||||| ||||| Sbjct 38982 GCTATTGCGCCTGCATCCTTTGTAGCTTGACGTTGGGCATCATTGAAGTATGCTGGAACG 38923 Query 361823 GTAATCACTGCTTTTTCAAC 361842 ||||||||||| | || ||| Sbjct 38922 GTAATCACTGCATCTTTAAC 38903 >seq467 Length=3082282 Score = 118 bits (130), Expect = 9e-21 Identities = 242/357 (68%), Gaps = 22/357 (6%) Strand=Plus/Plus Query 368793 AGTTTTGGATTGCTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATACATTATCCATT 368852 ||| || || || ||||||||||| || |||||||| |||| || | ||||| || || Sbjct 3042018 AGTATTTGACTGTTGGTTTGAATCGGGATCTATGCCATATGCCCAGAGTCATTACCCTTT 3042077 Query 368853 TGATAACGCAAAATACTTTGATAATGATAAAGATTATGT----GGCTGATTTTGTAACAG 368908 || || |||| | |||||| ||| ||| |||| | || | | | Sbjct 3042078 CGAGAATAAAAAAGAATTTGATGATG----------TGTTCCCGGCTAACTTCATTGCTG 3042127 Query 368909 AATCAATTGATCAAACACGTGGTTGGTTTTATACCCTATTAGTATTATCCACAGCTATTT 368968 || ||| ||||||||| | || ||||||||||| || |||| |||| || ||| | | Sbjct 3042128 AAGGAATAGATCAAACAAGAGGATGGTTTTATACACTTATAGTGATATCGACTGCTCTAT 3042187 Query 368969 TCGATAAACCGGCTTTTAAAAATGTAATAGTAACTGGTATTGTTAAT-GCATCTGATGGT 369027 | |||| || | || || ||| | || | | ||| ||| || | ||||| |||||| Sbjct 3042188 TTAATAAGGCGCCGTTCAAGAATCTTATTGCGAATGG-CTTGGTACTGGCATCCGATGGT 3042246 Query 369028 CAAAAGATGTCAAAAAGTAAGGGTAATTATTCCGATCCTAATATTTTAATTG---ATAAA 369084 || || ||||||||||| || |||||| | ||||| | || | ||| |||| Sbjct 3042247 CAGAAAATGTCAAAAAGGAAAAAGAATTATCCAGATCC---TCTTGAACTTGTACATAAG 3042303 Query 369085 TTTGGTGCTGATACTTTGAGATTATACCTATTGTCATCACCTGTAGTAAAAGCAGAA 369141 | |||||||||| || | || || || || | || || ||||| || |||||| Sbjct 3042304 TATGGTGCTGATGCTCTCAGGTTGTATCTGGTAAACTCGCCCGTAGTGAAGGCAGAA 3042360 >seq491 Length=596474 Score = 102 bits (112), Expect = 7e-16 Identities = 119/159 (75%), Gaps = 4/159 (3%) Strand=Plus/Minus Query 849328 ATGATCCATTAGATTTTGTCCAACTCCCGGTAAATTTTTTACTACAGGTATTCCCATATT 849387 ||||||||||| ||||||||| ||| ||||||| |||||| || | ||| ||||| | Sbjct 102688 ATGATCCATTAAATTTTGTCCGACT---GGTAAATCTTTTACAACGGATATACCCATTTC 102632 Query 849388 TTTCAGATGTTGTTCTGGTCCTAAACCAGATAACATCAGTATTTGTGGTGTGTTAAATAC 849447 || || ||| | |||||| | ||| |||||||| |||| ||| || ||||| | | | Sbjct 102631 TTCCAAATGACTTCTTGGTCCAATACCCGATAACATAAGTAATTGAGGAGTGTTTATTGC 102572 Query 849448 ACCACCACATAATATTACTTCTTTTTTAGCATAGTATTT 849486 ||| | | | || |||||||| || || |||||||| Sbjct 102571 TCCAGCTGAAACGATCACTTCTTTCTTTGC-TAGTATTT 102534 >seq27819 Length=1354 Score = 98.7 bits (108), Expect = 8e-15 Identities = 155/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 || ||||| ||||| | |||||| || ||| || || ||||| || | || || Sbjct 623 CTTAGACGAAGTACTAAATGAAGTGTTGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTG 564 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | |||||| | ||| || || ||||| ||||| | || || ||||| ||||||||| Sbjct 563 CGGCCATCTTCCAATTGCTTGCCAGCAAAGATAAGACGCTGTTGGTCAGGGGGAATTCCT 504 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGA 563433 || || || |||||||| ||| || |||||||| || | | | ||| | Sbjct 503 TCCTTGTCCTGAATTTTAGCTTTCACATTTTCAATTGTGTCCGATGGCTCAACTTCTAAT 444 Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 |||| ||| || |||||||| || |||||||| || |||||| Sbjct 443 GTAATAGTCTTGCCAGTAAGGGTCTTAACGAAGATCTGCATA 402 Score = 96.9 bits (106), Expect = 3e-14 Identities = 148/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 563265 TACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTC 563324 ||| | |||||| || ||| || ||| ||||| || | ||||| | | |||||| Sbjct 840 TACTAAATGAAGAGTGGATTCCTTCTGAATGTTGTAGTCGGAAAGAGTGCGTCCATCTTC 781 Query 563325 AAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTG 563384 | ||| || |||||||||||||||| || || ||||||||||| || ||||| ||||| Sbjct 780 TAATTGCTTGCCGGCAAAAATAAGTCGCTGTTGGTCAGGAGGAATCCCCTCTTTGTCTTG 721 Query 563385 AATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTTT 563444 ||||| ||||| ||||||||| || | | | ||| | || | || || Sbjct 720 GATTTTAGCCTTTACATTCTCAATTGTGTCTGATGGCTCAACTTCTAATGTGATGGTCTT 661 Query 563445 ACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 ||||| || || || || || || |||||| Sbjct 660 GCCAGTGAGTGTCTTCACAAAGATCTGCATA 630 Score = 87.8 bits (96), Expect = 1e-11 Identities = 156/224 (70%), Gaps = 4/224 (2%) Strand=Plus/Minus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 || ||||| ||||| | ||| | ||| |||||| ||||| ||||| | || || Sbjct 1079 CTTAGACGAAGTACTAAATGCAAGGTGGATTCTTTCTGGATATTATAATCGGAGAGGGTG 1020 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | |||||| | || || || || || || || | ||||| ||||| |||||||| Sbjct 1019 CGGCCATCTTCCAACTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGGGGAATTCCC 960 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA--TTCGA 563431 || || || |||||||| ||| || ||||||||||||| || || || ||| | Sbjct 959 TCCTTGTCCTGAATTTTGGCTTTAACATTTTCAATTGTATCAG-ATG-GTTCAACTTCCA 902 Query 563432 GAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 ||| | || || || || || || |||||||| || |||||| Sbjct 901 AAGTGATGGTCTTCCCGGTGAGGGTCTTAACGAAGATCTGCATA 858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4027710681043730