Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lerema_20accius_20[genbank_20GCA_5F001278395.1_202015-09-02] 29,977 sequences; 298,169,737 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq852 262 3e-65 seq397 116 3e-21 seq27819 113 4e-20 seq504 95.1 1e-14 >seq852 Length=562639 Score = 262 bits (290), Expect = 3e-65 Identities = 841/1282 (66%), Gaps = 38/1282 (3%) Strand=Plus/Plus Query 105818 TGTTCATGGCATTGAGTAAATCGCCGTTATCGGCATCTATTTCCCAAGCAAACAAACCGC 105877 ||||||| ||||| | |||||| |||||||| || || || ||||| || || | ||| | Sbjct 32593 TGTTCATAGCATTTAATAAATCTCCGTTATCCGCGTCGATCTCCCACGCGAAAAGACCAC 32652 Query 105878 CCAGTTTGTTTCGATCGACATATTTAACCTTGCCCAA-AACAGAATCGA-CGCTATCAAA 105935 | || || || |||||||||| |||| | ||| |||||| ||| | | || | Sbjct 32653 CGAGCTTATTATTTCTGACATATTTA-CCTTTCTCAATAACAGA-TCGTGCATTGTCGTA 32710 Query 105936 CGAAATTAAATCCNNNNNNNNNNNNNCAAAAACGTACGAAGCTTGAGCGACATTGTCAAA 105995 || ||||| ||| ||| || |||| ||||||||||| | ||| | Sbjct 32711 CGTAATTAGATCACCTGTCGAAGGCCTAAACACATACGGCGCTTGAGCGACGCTATCATA 32770 Query 105996 CGTGTACACGTA-----CGTGTTCAGTTTTGTTTG-AATCTGTCGGTAATCTACGACGCC 106049 | || | | | || || ||| || | ||||| || |||||| || || || Sbjct 32771 ATGGAACTCCCATTTTCCCTGCGCAATTTCATTCGCAATCTCTCTGTAATCCACCACACC 32830 Query 106050 GTCCTCCCAAGTGCCC--GACACGGGCCCGTTGCCGATTCCC---GAAA--AATAGTTGT 106102 ||| | ||| || || |||| || || | || ||| || ||| ||| || || Sbjct 32831 GTCTTGCCATGTACCTTTGACA-GGACCAGAAGC--ATTGCCTGTGAAGGGAAT-GTCGT 32886 Query 106103 TGCCAGTATAATTGGTCACGCCCGTCCACCCGCGGCCGTACATGGCAACTCCTACGATTA 106162 | | ||| || ||| | ||||| || || |||||||| ||||| || || | | Sbjct 32887 TTTC-GTACCCGTGAACAC--CAGTCCATCCACGTCCGTACATAGCAACACCAACTACGA 32943 Query 106163 TTTTGTTGGGATCGACGTCTTGTTTCAGCAACGCATCGACCGCGTAATGTGTTGTGTATT 106222 || || |||| ||| |||| | ||| | || || ||| || |||||| Sbjct 32944 CCTTCTTCGGATTGACTCCTTGAGCTAACAAGTATTTAACACCGAAATCAGTCGTGTATG 33003 Query 106223 TTTCTTCGGAATTCCAACTAGGCGCATATACCGTCGTTTGATAGCCCAGATCTGT-GTTC 106281 |||| | | |||||| || || || | | || || | || || ||| |||| Sbjct 33004 TTTCCTTAGGATTCCAGGCTGGAGCGTACAGAGATGTCTGGTGACCTAGGG-TGTCGTTC 33062 Query 106282 GACCACGCCCCTTTAAAATCGTAACTCATGAGGAAAATTTTGTCCAAATATTTTTGTGCG 106341 |||||||| || || || ||||| |||||| ||| || | ||||| || || |||||| Sbjct 33063 GACCACGCTCCCTTGAAGTCGTAGTTCATGAAGAAGATGTGGTCCATGTAGTTCTGTGCG 33122 Query 106342 TCGTTATAGTTTACCACGGCAATTTTGTCGTAGCCCGCGCTTATAGCGCTGGTTAATTCG 106401 | |||| ||||| ||| ||||| | || || || ||||| |||| ||| Sbjct 33123 CGACTGTAGTCGACCACTTGAATCTTGTCCCAACCAGCACTGATAGCTGAAGTTAGCTCG 33182 Query 106402 TAGAATTTGCCCGTTTGCAGTTC-TAATTCGTCTAGCATGGCGCGCAACTCTTGCAACAG 106460 || ||||| || |||| | ||| |||| ||||| | || | |||| || | Sbjct 33183 TACTTCTTGCCAGTA-GCAGATGATAACTCGTTGAGCATCTCACGAAGTTCTTTCATTAA 33241 Query 106461 CACGACATATGTTTCGGCGTCGCGTTCCGCATCGCCCAAAGAAGGATTGGCCCCTTTGCC 106520 | ||||| |||||| | || | | | |||| | ||| || || || ||||| Sbjct 33242 GAGCACATAGGTTTCGCCATCC---TTAGGACCGCCGAGGTTAGGGTTAGCGCCCTTGCC 33298 Query 106521 GCCTGGAAATTCCCAATCTATATCGACGCCATCAAAAAATTTCCAAACTTGCAAAAATTC 106580 ||| || ||||||||||| |||||||| |||||||| |||||||| || ||||| Sbjct 33299 GCCAGGGAATTCCCAATCGATATCGACACCATCAAAGAATTTCCACGTCATCAGGAATTC 33358 Query 106581 CTTTACAGAATTTACAAACACGTTTCTTTTTTCAACGTCATGCATAAAATAGAAGGGGTC 106640 ||| || ||||| || || || || || | ||||| | || |||| || || Sbjct 33359 CTTAACTGAATTGACGAAACGGTCCCTCTTCACTTTGTCATCAAAGAAGAAGAAAGGATC 33418 Query 106641 TGATAGCGTCCAACCGCCTATAGACGGAAGCACTTTTAAATGCGGATTTGCCAATTTAGC 106700 | || |||||||| || |||||||| || | |||||| | || | || || Sbjct 33419 AGCAAGAGTCCAACCTCCAATAGACGGCAGGATTTTTAAGTCAGGTCTGGCTTGCTTCAA 33478 Query 106701 CGCCATCAACTGTCCAAAGTTACCCTTGTAAGGCTCGTTCCAAGCGGACACGCCTTTTTG 106760 | ||||| || || ||||| ||||||||||| || ||||||| || | || ||||| Sbjct 33479 TGACATCAGTTGACCGAAGTTGCCCTTGTAAGGTTCATTCCAAGATGATAATCCCTTTTG 33538 Query 106761 CGGCTTCTGTATGGCAGCCCAGGGATCGTGAATAGAAACTTTAAAATCGGCGCGCCCTTT 106820 || ||||| | || ||||| |||||||| || || || || || || | || || | Sbjct 33539 TGGTTTCTGGAGAGCGGCCCATGGATCGTGGATGGACACCTTGAAGTCTTCTCGACCGCT 33598 Query 106821 GCATGATTTTTGCAAAGATTCAAAACTTCCCGGTATTGTTTTTAAGGCATCGTTTATTCC 106880 ||| || |||||||| || ||||| || ||| || || ||||| || || Sbjct 33599 GCAAGACCGTTGCAAAGCTTGGAAACTGCCTTCGATTTCCTTCAAACTGTCGTTGATGCC 33658 Query 106881 ATCACCGCCGCAGATGGGAATAAAACCGTACAATAAATGTGATAAATTGGGCAGCGGGAC 106940 ||| || || || || || || || ||||| || | ||| | | || || | || | Sbjct 33659 ATCTCCCCCACAAATTGGGATGAACCCGTATAAAAGATGCGTGAGGTTTGGAATTGGAAT 33718 Query 106941 TTTATCTACGGGAAAATTGCGGCCATACACGCCCCATTCGACAAAATACGCGGCGACAGT 107000 ||| || || || || || ||| |||||| |||||||| || || || || |||| Sbjct 33719 TTTGTCCACAGGGAACTTCCGGGGATACACACCCCATTCTACGAAGTAGGCACCGACTAC 33778 Query 107001 TTTGTCC---TCTCT-CCTGCCGGGCTCGTTGTTTTCCAGCCAT-GTGTACTCGAGCGGA 107055 ||| ||| | | | | || ||||| ||| || | | |||| ||||| || || || Sbjct 33779 TTT-TCCAGATGTTTGCTTGAAGGGCTTGTTCTTCT-CTCCCATGGTGTAATCCAGGGGT 33836 Query 107056 GCTAGATGGCCGCCGTCGGTGT 107077 | || |||| ||||| |||| Sbjct 33837 GGTAAGTGGCTACCGTCCGTGT 33858 >seq397 Length=962699 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || ||||| ||||| | || ||||||||||| ||| || ||||||||| Sbjct 57297 ATGCAGATCTTTGTTAAAACCCTGACTGGTAAAACCATAACCTTAGAGGTGGAACCTTCC 57238 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | ||| || ||| ||||| ||||| | ||| |||||| Sbjct 57237 GACACTATCGAAAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAG 57178 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||| | |||||||| ||||| ||||||||||||||| | ||| || |||| |||||| Sbjct 57177 CAGCGTCTTATCTTCGCGGGTAAACAATTGGAAGATGGTCGCACTTTGTCCGACTATAAC 57118 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATT 28765 || || ||||| || || || || |||| || Sbjct 57117 ATCCAGAAAGAGTCCACCCTTCATCTGGTGTT 57086 Score = 109 bits (120), Expect = 5e-19 Identities = 165/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 ||||||||| ||||| ||||| ||||| |||||||| || ||| ||| || || || Sbjct 58666 AATGCAAATTTTTGTGAAAACTTTAACTGGTAAAACTATCACCTTGGAAGTTGAGCCATC 58607 Query 28613 AGAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATC 28671 || || | | || | || ||||||| || ||||| || || | || |||| Sbjct 58606 CGATACAATTGAAAATGTAAAAGCAAAAATTCAA-GACAAGGAAGGCATACCACCTGATC 58548 Query 28672 AACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATA 28731 | ||| || | || || |||||||| ||||| ||||| ||| | | ||||| | Sbjct 58547 AGCAGCGATTGATTTTCGCGGGCAAGCAATTAGAAGACGGACGTACTCTTTCGGATTACA 58488 Query 28732 ACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 | |||||||||||||||||||| ||| | || || | ||||| |||||||| Sbjct 58487 ATATTCAAAAAGAATCTACTCTTCACCTCGTCTTGCGTTTACGTGGAGGGAT 58436 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| |||||||| ||||| | || ||||||||||| ||| || ||||||||| Sbjct 56613 ATGCAGATATTTGTTAAAACCCTGACCGGTAAAACCATAACCTTGGAGGTGGAACCTTCC 56554 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | ||| || ||| ||||| || || | || ||| || Sbjct 56553 GACACCATCGAAAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCAGACCAG 56494 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 |||||| | || |||||||| |||||| |||||||| | ||| || |||| || ||| Sbjct 56493 CAGAGATTGATTTTTGCGGGTAAACAACTGGAAGATGGTCGCACTCTGTCCGACTACAAC 56434 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATT 28765 || ||||| || || ||||| ||| |||| || Sbjct 56433 ATCCAAAAGGAGTCCACTCTCCACTTGGTTTT 56402 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || ||||| ||||| | || ||||||||||| ||| ||| ||||||||| Sbjct 57525 ATGCAGATCTTTGTTAAAACCCTGACCGGTAAAACCATCACCTTGGAAGTGGAACCTTCT 57466 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | ||| || || |||||||| || | ||| |||||| Sbjct 57465 GACACCATTGAAAATGTGAAGGCCAAGATTCAGGACAAAGAAGGCATTCCCCCAGATCAG 57406 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||| |||||||||| || || |||||| | |||||| || || |||| |||||| Sbjct 57405 CAGCGACTTATCTTCGCTGGTAAACAACTAGAAGATGGGCGCACATTGTCCGACTATAAC 57346 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATT 28765 || || ||||| || || || || ||||||| Sbjct 57345 ATCCAGAAAGAGTCCACCCTTCATCTGGTATT 57314 Score = 104 bits (114), Expect = 2e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || || || ||||| | || |||||||||||||| ||| ||| ||||| Sbjct 58209 ATGCAGATTTTCGTTAAAACTCTCACCGGTAAAACCATTACTCTCGAGGTGGAGCCTTCT 58150 Query 28614 GAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || | || || |||| || ||||||||||| | || ||| || Sbjct 58149 GACACCATAGAAAATGTAAAAGCTAAAATTCAA-GACAAAGAGGGTATTCCACCAGACCA 58091 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||| ||||| || ||||| || || |||||||||||| ||| || | || || || Sbjct 58090 ACAAAGACTGATATTTGCTGGTAAGCAATTGGAAGATGGGCGCACTTTGTCAGACTACAA 58031 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTA 28766 ||| || |||||||||||||| || | |||||| Sbjct 58030 CATCCAGAAAGAATCTACTCTTCATTTAGTATTA 57997 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || ||||| ||||| | || ||||||||||| ||| || ||||||||| Sbjct 56841 ATGCAGATCTTTGTTAAAACCCTGACTGGTAAAACCATCACCTTGGAGGTGGAACCTTCT 56782 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | ||| || || |||||||| || | ||| ||| || Sbjct 56781 GACACCATTGAAAATGTGAAGGCCAAGATTCAGGACAAAGAAGGCATTCCCCCAGACCAG 56722 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||| | |||||||| ||||| |||||| |||||||| | ||| || |||| |||||| Sbjct 56721 CAGCGTCTTATCTTCGCGGGTAAACAACTGGAAGATGGTCGCACTTTGTCCGACTATAAC 56662 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGT 28762 || || ||||| || || || || |||| Sbjct 56661 ATCCAGAAAGAGTCCACCCTTCATCTGGT 56633 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || ||||| ||||| | || ||||||||||| ||| || ||||||||| Sbjct 57069 ATGCAGATCTTTGTTAAAACCCTGACTGGTAAAACCATCACCTTGGAGGTGGAACCTTCC 57010 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | ||| || ||| ||||| || || | || ||| || Sbjct 57009 GACACCATCGAAAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCAGACCAG 56950 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 |||||| | || ||||| || ||||| ||||||||| | ||| || | || |||||| Sbjct 56949 CAGAGATTGATTTTTGCAGGTAAACAGTTGGAAGATGGTCGCACTTTGTCTGACTATAAC 56890 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATT 28765 || || |||||||| || || || |||| || Sbjct 56889 ATCCAGAAAGAATCCACCCTTCATCTGGTGTT 56858 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || ||||| ||||| | || ||||||||||| ||| || ||| ||||| Sbjct 57753 ATGCAGATCTTTGTTAAAACCCTGACCGGTAAAACCATCACCTTGGAGGTGGAGCCTTCT 57694 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | ||| || ||| ||||| || || | ||| ||| || Sbjct 57693 GACACCATCGAAAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAG 57634 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||| | |||||||| ||||| |||||| |||||||| | ||| || | || |||||| Sbjct 57633 CAGCGTCTTATCTTCGCGGGTAAACAACTGGAAGATGGTCGCACTTTGTCTGACTATAAC 57574 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGT 28762 || || ||||| || || || || |||| Sbjct 57573 ATCCAGAAAGAGTCCACCCTTCATCTGGT 57545 >seq27819 Length=1354 Score = 113 bits (124), Expect = 4e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || ||||| ||||| | || || || ||||| || ||| ||||| || Sbjct 1087 ATGCAGATCTTTGTCAAAACCCTCACCGGGAAGACCATCACTTTGGAAGTTGAACCATCT 1146 Query 28614 GAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || |||| || |||| || ||||||||||| | ||| || || Sbjct 1147 GACACTATCGAGAATGTCAAAGCCAAAATTCAG-GACAAAGAGGGGATTCCCCCTGACCA 1205 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||| | ||||||||||| ||||| |||||||||||| || || | || || || Sbjct 1206 ACAACGTCTTATCTTTGCCGGCAAGCAATTGGAAGATGGCCGTACACTGTCGGACTACAA 1265 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||| || || ||||| |||||||| | ||||||||||| |||||||| || Sbjct 1266 CATCCAGAAGGAATCCACTCTGCATTTAGTATTAAGATTGCGAGGAGGTAT 1316 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || ||||| || ||| | || || || ||||| || ||| || || ||| Sbjct 631 ATGCAGATCTTTGTGAAGACACTCACTGGCAAGACCATCACATTAGAAGTTGAGCCATCA 690 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | ||| |||||| ||||||||||| | || || ||| Sbjct 691 GACACAATTGAGAATGTAAAGGCTAAAATCCAAGACAAAGAGGGGATTCCTCCTGACCAA 750 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||| ||||||| ||||| ||||| ||||| |||||| ||| | |||| || ||| Sbjct 751 CAGCGACTTATTTTTGCCGGCAAGCAATTAGAAGATGGACGCACTCTTTCCGACTACAAC 810 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||||| || ||||| ||||| || | ||||| ||||| |||||||| || Sbjct 811 ATTCAGAAGGAATCCACTCTTCATTTAGTATTGAGATTGCGAGGAGGTAT 860 Score = 82.4 bits (90), Expect = 6e-11 Identities = 110/152 (72%), Gaps = 1/152 (1%) Strand=Plus/Plus Query 28632 AAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTTATCTTTGCG 28691 |||| |||| || ||||| |||||| | ||| || || ||| | ||||||||||| Sbjct 26 AAGCCAAAATTCAG-GACAAGGAGGGAATTCCCCCTGACCAGCAGCGTCTTATCTTTGCC 84 Query 28692 GGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAACATTCAAAAAGAATCTACT 28751 ||||| ||||| |||||| || | | || || ||||| || || ||||| ||| Sbjct 85 GGCAAGCAATTAGAAGATGGCCGCACCCTCTCGGACTACAACATCCAGAAGGAATCAACT 144 Query 28752 CTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 || || | ||||| ||||| |||||||| || Sbjct 145 CTTCATTTAGTATTGAGATTGCGAGGAGGTAT 176 >seq504 Length=80497 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || ||||| || ||| | || || || || ||||| ||| || || || Sbjct 72661 ATGCAGATCTTTGTGAAGACACTCACTGGCAAGACTATTACATTAGAAGTTGAGCCATCG 72720 Query 28614 GAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || | || || |||| || ||||||||||| | || || || Sbjct 72721 GATACAATTGAAAATGTGAAAGCTAAAATTCAG-GACAAAGAGGGGATTCCTCCTGACCA 72779 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||| | ||||||||||| ||||| |||||||||||| || || | || || || Sbjct 72780 ACAACGTCTTATCTTTGCCGGCAAGCAATTGGAAGATGGCCGTACACTGTCAGACTACAA 72839 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 |||||| |||||||| |||||||| | || || ||||| ||||||| || Sbjct 72840 CATTCAGAAAGAATCCACTCTGCATTTAGTGTTGAGATTGAGAGGAGGAAT 72890 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || ||||| || ||| | || || || ||||| || || || || || Sbjct 73896 ATGCAGATCTTTGTGAAGACACTCACCGGAAAGACCATCACATTGGAGGTTGAGCCATCT 73955 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | ||| ||||| ||||||||||| | ||| || ||| Sbjct 73956 GACACTATTGAAAATGTGAAGGCCAAAATTCAAGACAAAGAGGGGATTCCCCCTGACCAA 74015 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || | ||||||||||| ||||| ||||||||||| || || | || || ||| Sbjct 74016 CAACGTCTTATCTTTGCCGGCAAGCAATTGGAAGACGGCCGTACACTGTCGGACTACAAC 74075 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 || || |||||||| |||||||| | ||||| ||||| ||||||| || Sbjct 74076 ATCCAGAAAGAATCCACTCTGCATTTAGTATTGAGATTGAGAGGAGGTAT 74125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425249380616283