Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lerema_20accius_20[genbank_20GCA_5F001278395.1_202015-09-02] 29,977 sequences; 298,169,737 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq28624 149 3e-31 >seq28624 Length=432676 Score = 149 bits (164), Expect = 3e-31 Identities = 344/505 (68%), Gaps = 20/505 (4%) Strand=Plus/Minus Query 24655 TTTTTCTAATGTAAATTGCTTAGCTGATACTGCTGGTTTAGTTCTAAGATAATACATTCC 24714 ||| |||| || ||||| | || | | || ||||| || | | |||||||||||| Sbjct 59692 TTTATCTACAGTGAATTGAATGGCGTTTGCGGCGGGTTTCGTCCGCAAATAATACATTCC 59633 Query 24715 AGTTTTCAATTTCTTCTTCCAACCGTAAAAATGCATTGATGTTAGTTTTGC--AATGTTT 24772 ||||||||| | |||||||| ||| ||||| |||||||| | ||| | ||| || Sbjct 59632 AGTTTTCAAACCCATCTTCCAAGCGTGGAAATGAATTGATGTCAATTTACCGTAAT-TTG 59574 Query 24773 GCTGATTCTAAAAACAAGTTCATCGATTGAGCTTGGCAAACAAAACGTTGTCTATCTGCA 24832 ||| | | | | ||| | |||||| ||| | |||| ||| |||||| Sbjct 59573 GCTCAG-CAACGTGAATGTTAAACGATTGGCTTTGATCGATAAAAGCACCTCTGTCTGCA 59515 Query 24833 GCTAAGTCAATGATCGTTTTCATCGATATATCGTAAGCTGTTTTGTATCTCTCTTTTATC 24892 || | | ||| | ||||| | ||||| || | ||||||||||| ||| | || Sbjct 59514 GCCATCTGAATTGTAGTTTTGACTGATATCTCCCATACTGTTTTGTATAGCTCCCTGATA 59455 Query 24893 TCAGTTGGAATACTTGCAATATTTTGAACTGATCCATTTTCTCTCAAT----AGATTCAA 24948 || | || |||||| |||||||||||| || ||||| | | | ||| |||||| Sbjct 59454 TCTTTCGGTATACTTTCAATATTTTGAATGGAGCCATTAT-TGTGAATTATAAGATTCT- 59397 Query 24949 TCTCATATTCGGTGTCCAA-AGATTAATTTTT-TCAAGATCTCTAATCAAGTGTTTATTT 25006 |||||| || ||| | || | | | |||| ||||| || | || | |||| Sbjct 59396 --TCATAT-CGTCATCCCACAGCTCGGCCTGTGTCAA-ATCTCGAAGAAGATGGTGATTT 59341 Query 25007 ATGATAATAAATTCTCCAGACAAAACTCTTC--TTATTGATAAGTTTGAAGTGAATGGTT 25064 | || ||||| ||||| |||||||| | | || ||| ||||||||||| || | Sbjct 59340 ACGACCTGGAATTCGCCAGATAAAACTCTGCGCTGATATATA--TTTGAAGTGAACGGCT 59283 Query 25065 CAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTA 25124 |||| | ||||| || || | ||||| | |||||| ||||| |||||| |||| || Sbjct 59282 CAAAGGACTCATTGTTACCAAGAATTTGTGCAGTAGAAGCTGTAGGCATTGGAGCTAGTA 59223 Query 25125 ATAGCGAATTTCTCAAACCATATTT 25149 | ||||||||||| ||||| | ||| Sbjct 59222 ACAGCGAATTTCTTAAACCGTGTTT 59198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252947553180275