Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lerema_20accius_20[genbank_20GCA_5F001278395.1_202015-09-02] 29,977 sequences; 298,169,737 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq852 226 2e-54 seq397 159 3e-34 seq504 131 1e-25 seq27819 129 5e-25 seq87 102 6e-17 seq963 84.2 2e-11 >seq852 Length=562639 Score = 226 bits (250), Expect = 2e-54 Identities = 786/1209 (65%), Gaps = 33/1209 (3%) Strand=Plus/Minus Query 45106 GTCGCCGCTTATTTCGTTGAATGGGGAGTGTATGGGCGCAATTTTCCTATGAACCGCGTG 45165 |||| || || ||||| |||||||| |||||| || || || ||| || || | Sbjct 33775 GTCGGTGCCTACTTCGTAGAATGGGGTGTGTATCCCCGGAAGTTCCCTGTGGACAAAATT 33716 Query 45166 CCAGTGCCGAACCTTACGCATTTGTTATACGGTTTTATTCCTATATGCGGTGGCGATGGC 45225 ||| | || ||||| |||||| | |||||||| || || || || || || || |||||| Sbjct 33715 CCAATTCCAAACCTCACGCATCTTTTATACGGGTTCATCCCAATTTGTGGGGGAGATGGC 33656 Query 45226 ATTAATGACAGTCTTAAAACGATTACAGGCAGTTTTGAAGCGTTGCAAAAATCGTGCGCC 45285 || || |||||| | || || ||||||||| |||| |||||| || ||| | Sbjct 33655 ATCAACGACAGTTTGAAGGAAATCGAAGGCAGTTTCCAAGCTTTGCAACGGTCTTGCAGC 33596 Query 45286 GGCCGCTCAGATTTCAAAGTGAGCATTCACGACCCATGGGCCGCTGTGCAAAAACCACAA 45345 || || ||| ||||| ||| ||| ||||| |||||||||||| | || ||||||||| Sbjct 33595 GGTCGAGAAGACTTCAAGGTGTCCATCCACGATCCATGGGCCGCTCTCCAGAAACCACAA 33536 Query 45346 AAAGGCGTTTCTGCTTGGAACGAACCGTATAAAGGCAATTTTGGACAAATCATGGCTGTA 45405 || || | || ||||||| ||||| || || ||||| || || ||| | ||| | | Sbjct 33535 AAGGGATTATCATCTTGGAATGAACCTTACAAGGGCAACTTCGGTCAACTGATGTCATTG 33476 Query 45406 AAACGGGCAAATCCTCATTTAAAAGTGTTGCCATCGATTGGCGGCTGGACGCTGTCCGAT 45465 || | || | ||| | |||||| | |||| || ||||| || ||||| || | ||| Sbjct 33475 AAGCAAGCCAGACCTGACTTAAAAATCCTGCCGTCTATTGGAGGTTGGACTCTTGCTGAT 33416 Query 45466 CCGTTTTACCATTTGCACGATGCGGAGAAACGCGCTTTGTTTGTGGAATCCGTGCGCGAA 45525 || || | | || | || | ||| | | || || | || || ||| Sbjct 33415 CCTTTCTTCTTCTTTGATGACAAAGTGAAGAGGGACCGTTTCGTCAATTCAGTTAAGGAA 33356 Query 45526 TTTTTAACTACGTGGAAATTTTTTGACGGAGTCGATATAGATTGGGAGTTTCCCGGCGGC 45585 || | | ||||||||||| ||||| || |||||||| |||||||| || || |||||| Sbjct 33355 TTCCTGATGACGTGGAAATTCTTTGATGGTGTCGATATCGATTGGGAATTCCCTGGCGGC 33296 Query 45586 AATGGCGCCAATCCATCGGTGGGCGATCCAGAACGCGACGGTCTCACTTATGTAGCAC-T 45644 || ||||| || || | |||| ||| | || || || ||||| || | | Sbjct 33295 AAGGGCGCTAACCCTAACCTCGGCGGTCCTAA---GGATGGCGAAACCTATGT-GCTCTT 33240 Query 45645 GCTGCGCGATTTGCGCGACATGCTCGATCAATTGGCGCACGAAACCGGTCGGCGCTACGA 45704 || || | || || |||||| | | || | | || || | ||||| Sbjct 33239 AATGAAAGAACTTCGTGAGATGCTCAACGAGTTATCATCTGCTACTGGCAAGAAGTACGA 33180 Query 45705 ACTGACTACGGCTATAAGCGCCGGTGACGACAAAATCGCTTTGGTAGATTATCAAGACGC 45764 || ||| | ||||| || || ||| ||||| || |||| || || || ||| Sbjct 33179 GCTAACTTCAGCTATCAGTGCTGGTTGGGACAAGATTCAAGTGGTCGACTA--CAGTCGC 33122 Query 45765 GCA---AACTTATCTCGATCGAATCTTTTTAATGACGTATGATTTTAAAGGCGCTTGGTC 45821 ||| ||| || | || | ||||| || |||| || || || || || || ||||| Sbjct 33121 GCACAGAAC-TACATGGACCACATCTTCTTCATGAACTACGACTTCAAGGGAGCGTGGTC 33063 Query 45822 GAACTCGGATTTGGGCCATCAAACGGCCGTGTACGCGCCAGAATGGAATCGCGACGAGCG 45881 |||| | || || || || | ||||||| |||| ||||||| | || Sbjct 33062 GAACGACACCCTAGGTCACCAGACATCTCTGTACGCTCCAGCCTGGAATCCTAAGGAAAC 33003 Query 45882 TTACACAGTCGACTACGCGGTGCACGTTTTGCTCGAAAAACGGGTAAAGCCTCAAAAAAT 45941 ||||| || | || || | ||| | | || | || || || | || | Sbjct 33002 ATACACGACTGATTTCGGTGTTAAATACTTGTTAGCTCAAGGAGTCAATCCGAAGAAGGT 32943 Query 45942 CGTGCTCGGCGTGGCAATGTACGGTCGCGGCTGGACCGGAGTAATTAAC---TATCAAGA 45998 ||| | || || || |||||||| || || ||||| || | || || || || | Sbjct 32942 CGTAGTTGGTGTTGCTATGTACGGACGTGGATGGACTGGTG---TTCACGGGTACGAAAA 32886 Query 45999 CGACAACCCGTTTACCGGCATCGCAACCGGGCCCGTGTCCGGCACTTGGGAAGACGGTGT 46058 ||||| || || || |||| || | || || || || || ||| |||||||||| Sbjct 32885 CGACATTCCCTTCACAGGCAATGCTTCTGGTCCTGTCAAAGGTACATGGCAAGACGGTGT 32826 Query 46059 GATCGATTATCGACAAATT-AAAAACAATTTAC-----AACGATATAAGTATACTTATGA 46112 | | ||||| || | ||| || || || | | || ||| |||||| Sbjct 32825 GGTGGATTACAGAGAGATTGCGAATGAAATTGCGCAGGGAAAATGGGAGTTCCATTATGA 32766 Query 46113 CA-CGACAGCCAAAGCGGCCTACGTGTT--CGCCAAAAACACCGGCGATTTAATCAGTTT 46169 | || | || ||||| | || ||||| ||| ||| || ||| |||| | | Sbjct 32765 TAGCGTC-GCTCAAGCGCCGTATGTGTTTAGGCCTTCGACA--GGTGATCTAATTACGTA 32709 Query 46170 TGATA--GCAGCGACTCTGTGCTTGATAAAGGGCAATATGTCATTGAGCACAATTTGGCC 46227 || | ||| ||| ||||| |||| ||||| ||||||||| | | || | | Sbjct 32708 CGACAATGCA-CGA-TCTGTTATTGAGAAAGGTAAATATGTCAGAAATAATAAGCTCGGT 32651 Query 46228 GGCTTGTTTGCGTGGGAGATTGACGCTGACAACGGCGATTTATTAAATGCTATGCACACA 46287 || | || ||||||||||| ||||| || ||||| |||||||||||||||||| ||| Sbjct 32650 GGTCTTTTCGCGTGGGAGATCGACGCGGATAACGGAGATTTATTAAATGCTATGAACATG 32591 Query 46288 GGACTTGGT 46296 || |||||| Sbjct 32590 GGCCTTGGT 32582 >seq397 Length=962699 Score = 159 bits (176), Expect = 3e-34 Identities = 163/210 (78%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 || |||||||| || |||||||| || ||||| || || | | ||||| ||| || Sbjct 58001 ACTAAATGAAGAGTAGATTCTTTCTGGATGTTGTAGTCTGACAAAGTGCGCCCATCTTCC 58060 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 | ||| || |||||| |||||| |||||| || || || |||||||||||||||||||| Sbjct 58061 AATTGCTTACCAGCAAATATCAGTCTTTGTTGGTCTGGTGGAATACCCTCTTTGTCTTG- 58119 Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 |||||| | ||| ||| |||||| ||||||||| | || || || ||||| || ||||| Sbjct 58120 AATTTTAGCTTTTACATTTTCTATGGTGTCAGAAGGCTCCACCTCGAGAGTAATGGTTTT 58179 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || | |||||||| || |||||||| Sbjct 58180 ACCGGTGAGAGTTTTAACGAAAATCTGCAT 58209 Score = 149 bits (164), Expect = 5e-31 Identities = 167/218 (77%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCG-CAATGGTGCGAG 29629 ||||| |||| |||||| ||||| ||||| || |||||||| || | ||||| |||| Sbjct 57310 ACGCAATACCAGATGAAGGGTGGACTCTTTCTGGATGTTATAGTCGGACAATG-TGCGCC 57368 Query 29630 AATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTT 29689 ||| || |||||||| ||||| | || | || |||||||| || ||||| || |||| Sbjct 57369 CATCTTCTAGTTGTTTACCAGCGAAGATAAGTCGCTGCTGATCTGGGGGAATGCCTTCTT 57428 Query 29690 TGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTT 29748 |||| || ||| || | || ||| |||| | ||||||||| |||| ||||| | || Sbjct 57429 TGTCCTG-AATCTTGGCCTTCACATTTTCAATGGTGTCAGAAGGTTCCACTTCCAAGGTG 57487 Query 29749 ATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || || | |||||||||||| |||||||| Sbjct 57488 ATGGTTTTACCGGTCAGGGTTTTAACAAAGATCTGCAT 57525 Score = 147 bits (162), Expect = 2e-30 Identities = 162/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||||| ||||| |||||| ||||||||||| || |||||||| || | | |||||| Sbjct 56854 ACGCAACACCAGATGAAGGGTGGATTCTTTCTGGATGTTATAGTCAGACAAAGTGCGACC 56913 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || | ||||| || ||| | |||||||| ||||| || || ||||| || || || Sbjct 56914 ATCTTCCAACTGTTTACCTGCAAAAATCAATCTCTGCTGGTCTGGAGGAATGCCTTCCTT 56973 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || || ||| |||| | ||||| ||| |||| || || | || || Sbjct 56974 GTCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCGGAAGGTTCCACCTCCAAGGTGAT 57033 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| ||||| | |||||||||||| |||||||| Sbjct 57034 GGTTTTACCAGTCAGGGTTTTAACAAAGATCTGCAT 57069 Score = 145 bits (160), Expect = 6e-30 Identities = 164/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||||||||||| |||||| ||||| ||||| || |||||||| || | | |||||| Sbjct 56626 ACGCAGCACCAGATGAAGGGTGGACTCTTTCTGGATGTTATAGTCGGACAAAGTGCGACC 56685 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || |||||||| || || | || | | ||||| || || ||||| || ||||| Sbjct 56686 ATCTTCCAGTTGTTTACCCGCGAAGATAAGACGCTGCTGGTCTGGGGGAATGCCTTCTTT 56745 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||| || ||| || | || ||| |||| | ||||||||| |||| || || | || | Sbjct 56746 GTCCTG-AATCTTGGCCTTCACATTTTCAATGGTGTCAGAAGGTTCCACCTCCAAGGTGA 56804 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | ||||| ||||| | |||||||||||| |||||||| Sbjct 56805 TGGTTTTACCAGTCAGGGTTTTAACAAAGATCTGCAT 56841 Score = 145 bits (160), Expect = 6e-30 Identities = 171/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | ||||||| || | ||||| || |||||||||||||| || ||||||| | Sbjct 58439 CCTCCACGTAAACGCAAGACGAGGTGAAGAGTAGATTCTTTTTGAATATTGTAATCCGAA 58498 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || || || || | ||| ||||| || | ||||||| |||||||| || || Sbjct 58499 AGAGTACGTCCGTCTTCTAATTGCTTGCCCGCGAAAATCAATCGCTGCTGATCAGGTGGT 58558 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || || |||||||| |||||||| ||| ||| |||| | || || || | || || Sbjct 58559 ATGCCTTCCTTGTCTTG-AATTTTTGCTTTTACATTTTCAATTGTATCGGATGGCTCAAC 58617 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 ||| | || |||||||| |||||||| ||||| ||||| || |||||| Sbjct 58618 TTCCAAGGTGATAGTTTTACCAGTTAAAGTTTTCACAAAAATTTGCATT 58666 Score = 141 bits (156), Expect = 7e-29 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||||| ||||| || || ||||| || ||||| ||||| || || | | |||||| Sbjct 56398 ACGCAAAACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGACAGAGTGCGACC 56457 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || |||||||| || ||| | |||||||| ||||| || || ||||| || || || Sbjct 56458 ATCTTCCAGTTGTTTACCCGCAAAAATCAATCTCTGCTGGTCTGGAGGAATGCCTTCCTT 56517 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || || ||| |||| | ||||| ||| |||| || || | ||||| Sbjct 56518 GTCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCGGAAGGTTCCACCTCCAAGGTTAT 56577 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || || | ||||||||||||||||||||| Sbjct 56578 GGTTTTACCGGTCAGGGTTTTAACAAATATCTGCAT 56613 Score = 141 bits (156), Expect = 7e-29 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||||| ||||| |||||| ||||| ||||| || |||||||| || | | |||||| Sbjct 57082 ACGCAACACCAGATGAAGGGTGGACTCTTTCTGGATGTTATAGTCGGACAAAGTGCGACC 57141 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || | |||||| || || | || | | |||||||| || ||||| ||||| || Sbjct 57142 ATCTTCCAATTGTTTACCCGCGAAGATAAGACGCTGCTGATCTGGGGGAATGCCCTCCTT 57201 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || || ||| |||| | |||||| ||| |||| || || | ||||| Sbjct 57202 GTCCTGGATCTTGGCCTTCACATTTTCGATAGTGTCGGAAGGTTCCACCTCTAAGGTTAT 57261 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| ||||| | |||||||||||| |||||||| Sbjct 57262 GGTTTTACCAGTCAGGGTTTTAACAAAGATCTGCAT 57297 Score = 132 bits (146), Expect = 4e-26 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||||||||| | |||||| ||||| || || || |||||||| || | | |||||| Sbjct 57766 ACGCAGCACTAGATGAAGGGTGGACTCCTTCTGGATGTTATAGTCAGACAAAGTGCGACC 57825 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || | ||||| || || | |||||||| |||||||| || ||||| || ||||| Sbjct 57826 ATCTTCCAACTGTTTACCTGCGAAAATCAATCTCTGCTGATCTGGAGGAATGCCTTCTTT 57885 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || || ||| | || | ||| || || || ||||| | ||||| Sbjct 57886 GTCCTGGATCTTGGCCTTCACATTCTCAATAGTATCCGATGACTCAACTTCTAAGGTTAT 57945 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||||||||||||| || || ||||| |||||||| Sbjct 57946 TGTTTTGCCAGTTAAAGTCTTTACAAAGATCTGCAT 57981 Score = 129 bits (142), Expect = 5e-25 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||||||||||| |||||| ||||| ||||| || |||||||| || | | |||||| Sbjct 57538 ACGCAGCACCAGATGAAGGGTGGACTCTTTCTGGATGTTATAGTCAGACAAAGTGCGACC 57597 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || |||||||| || || | || | | ||||| || || ||||| || || || Sbjct 57598 ATCTTCCAGTTGTTTACCCGCGAAGATAAGACGCTGCTGGTCTGGGGGAATGCCTTCCTT 57657 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || || ||| |||| | ||||||||| | || || || | || || Sbjct 57658 GTCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCAGAAGGCTCCACCTCCAAGGTGAT 57717 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || || | |||||||||||| |||||||| Sbjct 57718 GGTTTTACCGGTCAGGGTTTTAACAAAGATCTGCAT 57753 Score = 120 bits (132), Expect = 2e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | | ||| || || | ||||| || |||||||||||||| || || || | | Sbjct 58211 CCTCCACGAAGACGTAGAACAAGGTGAAGTGTAGATTCTTTTTGAATATTGTAGTCTGAA 58270 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || || || ||||| || || || || | |||| | ||||||||| || ||| Sbjct 58271 AGTGTACGTCCGTCTTCGAGCTGCTTTCCTGCGAAGATCAGGCGTTGCTGATCTGGGGGA 58330 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| || |||||||| ||| || | || || |||| | || ||||| | || || Sbjct 58331 ATACCTTCCTTGTCTTG-AATCTTAGCCTTCACGTTTTCGATGGTATCAGACGGCTCCAC 58389 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || |||||||| ||||| | |||||| || || |||||||| Sbjct 58390 CTCAAGGGTAATAGTTTTACCAGTGAGGGTTTTTACGAAGATCTGCAT 58437 >seq504 Length=80497 Score = 131 bits (144), Expect = 1e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 |||||| ||||| | || ||| ||||| || ||||||||||| |||||||| || || | Sbjct 72888 TCCTCCTCTCAATCTCAACACTAAATGCAGAGTGGATTCTTTCTGAATGTTGTAGTCTGA 72829 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | || || ||| || | ||| ||||| ||| | || | | ||| || || || || Sbjct 72828 CAGTGTACGGCCATCTTCCAATTGCTTGCCGGCAAAGATAAGACGTTGTTGGTCAGGAGG 72769 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 ||| ||||||||||| || |||||| | ||| ||| |||| | || || || | || | Sbjct 72768 AATCCCCTCTTTGTCCTG-AATTTTAGCTTTCACATTTTCAATTGTATCCGATGGCTCAA 72710 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||| | || ||||| |||||||| | || || ||||| |||||||| Sbjct 72709 CTTCTAATGTAATAGTCTTGCCAGTGAGTGTCTTCACAAAGATCTGCAT 72661 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| ||||| | | || |||||||| || |||||||| || || ||||| || || | Sbjct 74351 TCCACCCCTAAGTCTGAGTACCAAATGCAGAGTGGATTCCTTCTGGATGTTGTAGTCGGA 74292 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | |||||| ||| || || || ||||| ||| | || | || || || || || || Sbjct 74291 GAGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAAATAAGTCGCTGTTGGTCAGGAGG 74232 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||| |||||||||||||| | ||| ||| ||| | || | || || ||| | || || Sbjct 74231 AATCCCCTCTTTGTCTTGGATTTTAGCTTTCACATTCTCAATTGTATCCGAAGGCTCAAC 74172 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| || || ||||| |||||||| | || || ||||| |||||||| Sbjct 74171 TTCCAGTGTAATAGTCTTGCCAGTGAGTGTCTTGACAAAGATCTGCAT 74124 Score = 122 bits (134), Expect = 7e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || || | ||| || || |||||||| || ||||| || || ||||| || || | Sbjct 73343 CCACCTCTTAGACGAAGTACTAAATGAAGAGTCGATTCCTTCTGGATGTTGTAGTCGGAG 73284 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||| ||| || || || ||||||||| | || | | ||| || || || ||| Sbjct 73283 AGAGTGCGTCCATCTTCAAGCTGCTTGCCAGCAAAGATAAGACGTTGTTGGTCAGGAGGA 73224 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || || ||||||||||| |||||| | ||| ||| | || | || || || | || || Sbjct 73223 ATGCCTTCTTTGTCTTG-AATTTTGGCTTTAACATTCTCAATTGTATCCGATGGCTCAAC 73165 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 ||| || || ||||| |||||||| | || || ||||| ||||||||| Sbjct 73164 TTCCAGTGTAATAGTCTTGCCAGTGAGTGTCTTGACAAAGATCTGCATT 73116 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| ||||| | || || ||||| || ||||||||||| || ||||| || |||| Sbjct 74122 CCTCCTCTCAATCTCAATACTAAATGCAGAGTGGATTCTTTCTGGATGTTGTAGTCCGAC 74063 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || || || || | ||| ||||| ||| | || | | ||| || || || ||| Sbjct 74062 AGTGTACGGCCGTCTTCCAATTGCTTGCCGGCAAAGATAAGACGTTGTTGGTCAGGGGGA 74003 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || |||||||||||||| |||||| | || ||| |||| | ||||||||| | || || Sbjct 74002 ATCCCCTCTTTGTCTTG-AATTTTGGCCTTCACATTTTCAATAGTGTCAGATGGCTCAAC 73944 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | || || || || || || | || || ||||| |||||||| Sbjct 73943 CTCCAATGTGATGGTCTTTCCGGTGAGTGTCTTCACAAAGATCTGCAT 73896 Score = 113 bits (124), Expect = 3e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| || | ||| || || || || | ||||| || || ||||||||||| || | Sbjct 72431 CCTCCTCTAAGACGAAGTACTAAGTGCAAGGTGGACTCCTTCTGAATGTTATAGTCGGAG 72372 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||| ||| || | ||| |||||||| |||| || | ||| || || || ||| Sbjct 72371 AGAGTGCGGCCATCTTCCAATTGCTTGCCAGCGAATATTAACCGTTGTTGGTCAGGGGGA 72312 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || ||||| |||||||| | || || ||| | || | ||||||||| | || || Sbjct 72311 ATCCCCTCCTTGTCTTGGATCTTGGCCTTCACATTCTCGATAGTGTCAGATGGCTCAACC 72252 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || | || || || ||||| || | ||| || ||||| |||||||| || Sbjct 72251 TCCAATGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATGTT 72202 >seq27819 Length=1354 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | ||| | | || ||||| || |||||||| || || ||||| || |||| Sbjct 1313 CCTCCTCGCAATCTTAATACTAAATGCAGAGTGGATTCCTTCTGGATGTTGTAGTCCGAC 1254 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || || ||| || | ||| ||||| ||| | || | | ||| || || || ||| Sbjct 1253 AGTGTACGGCCATCTTCCAATTGCTTGCCGGCAAAGATAAGACGTTGTTGGTCAGGGGGA 1194 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || ||||||||||| || |||||| | ||||||| | || | ||||||||| |||| || Sbjct 1193 ATCCCCTCTTTGTCCTG-AATTTTGGCTTTGACATTCTCGATAGTGTCAGATGGTTCAAC 1135 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| | ||| || || || || || | |||||| ||||| |||||||| Sbjct 1134 TTCCAAAGTGATGGTCTTCCCGGTGAGGGTTTTGACAAAGATCTGCAT 1087 Score = 125 bits (138), Expect = 6e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | ||| | || || ||||| | ||||||||||| || || |||||||| | Sbjct 401 CCTCCTCGCAATCTCAATACTAAATGCAAAGTGGATTCTTTCTGGATATTATAATCGGAG 342 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| || | || |||||||| | || | | ||||| || || ||| Sbjct 341 AGGGTGCGGCCATCTTCCAACTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGGGGA 282 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || ||||| ||||| || |||||| | ||| ||| |||| | || ||||| |||| || Sbjct 281 ATTCCCTCCTTGTCCTG-AATTTTGGCTTTAACATTTTCAATTGTATCAGATGGTTCAAC 223 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| | ||| || || || || || | |||||| ||||| |||||||| Sbjct 222 TTCCAAAGTGATGGTCTTCCCGGTGAGGGTTTTGACAAAGATCTGCAT 175 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | ||| | || || |||||||| |||||||| || |||||||| || || | | Sbjct 857 CCTCCTCGCAATCTCAATACTAAATGAAGAGTGGATTCCTTCTGAATGTTGTAGTCGGAA 798 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||| ||| || | ||| ||||| ||| | || | || || || || || ||| Sbjct 797 AGAGTGCGTCCATCTTCTAATTGCTTGCCGGCAAAAATAAGTCGCTGTTGGTCAGGAGGA 738 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || |||||||||||||| | ||| || ||| | || | ||||| || | || ||| Sbjct 737 ATCCCCTCTTTGTCTTGGATTTTAGCCTTTACATTCTCAATTGTGTCTGATGGCTCAACT 678 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | || || || |||||||| | || || ||||| |||||||| Sbjct 677 TCTAATGTGATGGTCTTGCCAGTGAGTGTCTTCACAAAGATCTGCAT 631 Score = 120 bits (132), Expect = 2e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || || | ||| || || ||||| | ||||||||||| || || |||||||| | Sbjct 1085 CCACCTCTTAGACGAAGTACTAAATGCAAGGTGGATTCTTTCTGGATATTATAATCGGAG 1026 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| || | || |||||||| | || | | ||||| || || ||| Sbjct 1025 AGGGTGCGGCCATCTTCCAACTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCAGGGGGA 966 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || ||||| ||||| || |||||| | ||| ||| |||| | || ||||| |||| || Sbjct 965 ATTCCCTCCTTGTCCTG-AATTTTGGCTTTAACATTTTCAATTGTATCAGATGGTTCAAC 907 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| | ||| || || || || || | ||| ||||| || |||||||| Sbjct 906 TTCCAAAGTGATGGTCTTCCCGGTGAGGGTCTTAACGAAGATCTGCAT 859 >seq87 Length=431742 Score = 102 bits (112), Expect = 6e-17 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| |||||||| || || || || || || |||||||| || || | || |||||| Sbjct 313624 ACGTAGCACCAAGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCAGAAAGAGTGCGACC 313565 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || ||||| || | |||| | ||||| || || ||||| |||||||| Sbjct 313564 ATCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGAGGAATGCCCTCTTT 313505 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || || ||| | || | |||||||| || || || || || || Sbjct 313504 GTCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCAGAGGCCTCCACCTCGAGGGTGAT 313445 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || || |||| ||| || || || || |||||||| Sbjct 313444 TGTCTTTCCCGTTAGGGTCTTCACGAAGATTTGCATTTT 313406 >seq963 Length=295340 Score = 84.2 bits (92), Expect = 2e-11 Identities = 102/138 (74%), Gaps = 1/138 (1%) Strand=Plus/Plus Query 29652 ATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGAC 29711 |||| ||| || ||||||||||| || || ||||| |||||||| | || |||||| Sbjct 1866 ATATCTCAC-CTCTGCTGATCCGGAGGGATTCCCTCCTTGTCTTGGATCTTGGCTTTGAC 1924 Query 29712 AGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTT 29771 | |||| | || || || | || || |||||||| || || ||||| || | || || Sbjct 1925 ATTTTCGATGGTATCTGAGGGCTCAACCTCAAGAGTGATGGTCTTGCCCGTGAGAGTCTT 1984 Query 29772 AACAAATATCTGCATTTT 29789 ||| || |||||||| || Sbjct 1985 AACGAAGATCTGCATGTT 2002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385078462211757