Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lerema_20accius_20[genbank_20GCA_5F001278395.1_202015-09-02] 29,977 sequences; 298,169,737 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq852 253 2e-62 seq397 154 1e-32 seq27819 140 3e-28 seq504 136 3e-27 seq87 122 8e-23 seq536 95.1 1e-14 seq468 82.4 7e-11 >seq852 Length=562639 Score = 253 bits (280), Expect = 2e-62 Identities = 784/1204 (65%), Gaps = 22/1204 (2%) Strand=Plus/Plus Query 53368 CCCTTGTGTATCGCATTCAAAAGATCTCCGTTGTCCGCGTCGATTTCCCACGCAAACAAT 53427 ||| ||| || ||||| || | ||||||||| ||||||||||| |||||||| || | Sbjct 32589 CCCATGTTCATAGCATTTAATAAATCTCCGTTATCCGCGTCGATCTCCCACGCGAAAAGA 32648 Query 53428 CCACCGAGATCGTTTTCAATCACATACTGGCCCTTGTCTAGCACGGAATCGATGC--TGT 53485 |||||||| | || | | ||||| | || || || | || || ||| ||| ||| Sbjct 32649 CCACCGAGCTTATTATTTCTGACATATTTACCTTTCTCAATAACAGA-TCG-TGCATTGT 32706 Query 53486 CGTAACTGATTAAATCGCCAGAGTTTTTATTGAATACAAACGCTGCTTTGGCTGTAGTGT 53545 |||| | |||| ||| || | | || ||| ||| |||| || | | Sbjct 32707 CGTACGTAATTAGATCACCTGTCGAAGGCCTAAACACATACGGCGCTTGAGCGACGCTAT 32766 Query 53546 CGTAAGTGTAATCGTATTGA---TGGCCAATTTT-TTCGTCAATTTTTCGGTAATCAACG 53601 | ||| | | || ||| || |||||| |||| |||| | || |||||| || Sbjct 32767 CATAATGGAACTCCCATTTTCCCTGCGCAATTTCATTCG-CAATCTCTCTGTAATCCACC 32825 Query 53602 ACTCCGTCTTCCCATGTGCCTGTAACAGGGCCAGTTGCCACACCGGTGAACGGATTGTCA 53661 || ||||||| |||||| ||| | ||||| |||| || || ||||| ||| |||| Sbjct 32826 ACACCGTCTTGCCATGTACCTTTGACAGGACCAGAAGCATTGCCTGTGAAGGGAATGTCG 32885 Query 53662 TCGCGGTAGCCGCTCACTCCAGTCCAACCGCGCCCGTACATCGCCACTCCGAGAACAATT 53721 | ||| ||| || |||||||| || || |||||||| || || || | || | Sbjct 32886 TTTTCGTACCCGTGAACACCAGTCCATCCACGTCCGTACATAGCAACACCAACTACGACC 32945 Query 53722 TTTTCCTGTTGAACTTTTTGTTCGAGCAACGCGCGCACGGCAACATCGGCCGTGTAATGC 53781 || | | | | ||| ||| | | ||| || | | ||| | |||||| Sbjct 32946 TTCTTCGGATTGACTCCTTGAGCTAACAAGTATTTAACACCGAAATCAGTCGTGTATGTT 33005 Query 53782 TCGCTGGGAGACCAAACCGGCGCGTAAATCGCCGTTTGATGTCCCAAATCGGTGTTTGAC 53841 || | ||| ||| | || ||||| | | || || || || | | ||| ||| Sbjct 33006 TCCTTAGGATTCCAGGCTGGAGCGTACAGAGATGTCTGGTGACCTAGGGTGTCGTTCGAC 33065 Query 53842 CAAGCGCCTTTAAAATCATACGACATTaaaaaaaTTCTGTCCAGGTATTGTTGGGCGTCG 53901 || || || || || || || ||| || || || ||||| ||| | || ||| Sbjct 33066 CACGCTCCCTTGAAGTCGTAGTTCATGAAGAAGATGTGGTCCATGTAGTTCTGTGCGCGA 33125 Query 53902 CGATAGTTGACGACCGCAATTTTATCATTGCCTGCACTGATTGCGCTAGTCAACTCGAAC 53961 | |||| ||| || ||| || || || |||||||| || ||| | |||| || Sbjct 33126 CTGTAGTCGACCACTTGAATCTTGTCCCAACCAGCACTGATAGCTGAAGTTAGCTCGTAC 33185 Query 53962 TTTCGTCCAGTTTCCAATTCCAATTGATCCAACATTTGTCGCAACTCTTTTAACAACACC 54021 || ||||| | || || | | | ||| | || | ||||| | || | | Sbjct 33186 TTCTTGCCAGTAGCAGATGATAACTCGTTGAGCATCTCACGAAGTTCTTTCATTAAGAGC 33245 Query 54022 ACATACGTTAAACTATCTTTTTGAGGATCGCCCACGGACGGATTGGCACCGTTTCCGCCA 54081 ||||| ||| | ||| || |||| |||| | | || || || || || |||||| Sbjct 33246 ACATAGGTTTCGCCATCCTT---AGGACCGCCGAGGTTAGGGTTAGCGCCCTTGCCGCCA 33302 Query 54082 GGAAACTCCCAATCGACGTCGACACCATCAAAAAATTTCCACGTCAATAGGAATTCGCGC 54141 || || |||||||||| |||||||||||||| ||||||||||||| |||||||| Sbjct 33303 GGGAATTCCCAATCGATATCGACACCATCAAAGAATTTCCACGTCATCAGGAATTCCTTA 33362 Query 54142 ACGGAATCCACAAA-----CACTTTGCGTTTGGAAGAATCGTGGAAATGGTAAAACGGAT 54196 || |||| || || | || | | || | ||| ||| | | || |||| Sbjct 33363 ACTGAATTGACGAAACGGTCCCTCTTCACTTTGTC--ATCAAAGAA---GAAGAAAGGAT 33417 Query 54197 CCGATAACGTCCAACCGCCGATTGACGGTAATACTTTGACGTTGGGATTCGCTTTTTTCA 54256 | | | |||||||| || || ||||| | | ||| | || || | |||| |||| Sbjct 33418 CAGCAAGAGTCCAACCTCCAATAGACGGCAGGATTTTTAAGTCAGGTCTGGCTTGCTTCA 33477 Query 54257 CGGCCATAATCTGTCCAAAATTGCCTTTATACGGTTCGTTCCAGGCGGAGACGCCTTTTT 54316 | ||| | || || || ||||| || || ||||| ||||| | || | || |||| Sbjct 33478 ATGACATCAGTTGACCGAAGTTGCCCTTGTAAGGTTCATTCCAAGATGATAATCCCTTTT 33537 Query 54317 GCGGTTTTTGCACCGCCGCCCAAGGATCATGGATGGCTACTTTAAAATCCGACCGGCCAG 54376 | ||||| || | || ||||| ||||| ||||||| || || || || || || Sbjct 33538 GTGGTTTCTGGAGAGCGGCCCATGGATCGTGGATGGACACCTTGAAGTCTTCTCGACCGC 33597 Query 54377 CGCAAGATCTTTGTAGAGCTTCAAAACTGCCCGGTATAGTTTTTAAACTGTCATTTATTC 54436 |||||| | ||| | ||||| |||||||| || || |||||||| || || | Sbjct 33598 TGCAAGACCGTTGCAAAGCTTGGAAACTGCCTTCGATTTCCTTCAAACTGTCGTTGATGC 33657 Query 54437 CGTCGCCGCCGCAAATTGGCACAAAACCGTACAAAAGATGCGTCAAATTAGGCACGGGCA 54496 | || || || |||||||| | || ||||| ||||||||||| | || || | || | Sbjct 33658 CATCTCCCCCACAAATTGGGATGAACCCGTATAAAAGATGCGTGAGGTTTGGAATTGGAA 33717 Query 54497 CTTTGTCCATTGGAAAATTTCGTCCGTACACTCCCCATTCTACAAAATAGGCGGCCACAA 54556 |||||||| || || || || ||||| ||||||||||| || ||||| | || | Sbjct 33718 TTTTGTCCACAGGGAACTTCCGGGGATACACACCCCATTCTACGAAGTAGGCACCGACTA 33777 Query 54557 CTTT 54560 |||| Sbjct 33778 CTTT 33781 >seq397 Length=962699 Score = 154 bits (170), Expect = 1e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| |||||| | || || || |||| || | ||||| || || ||| Sbjct 58665 ATGCAAATTTTTGTGAAAACTTTAACTGGTAAAACTATCACCTTGGAAGTTGAGCCATCC 58606 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || ||| ||||||||||||||| |||||||||||||| ||||| Sbjct 58605 GATACAATTGAAAATGTAAAAGCAAAAATTCAAGACAAGGAAGGCATACCACCTGATCAG 58546 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| || || | ||| ||||| ||||| |||||| | || |||| |||||||| Sbjct 58545 CAGCGATTGATTTTCGCGGGCAAGCAATTAGAAGACGGACGTACTCTTTCGGATTACAAT 58486 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||| || || || | || | || |||||||| || || || || Sbjct 58485 ATTCAAAAAGAATCTACTCTTCACCTCGTCTTGCGTTTACGTGGAGGGAT 58436 Score = 149 bits (164), Expect = 5e-31 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||||||||| ||||| |||||||| || | || || | || |||||||| || Sbjct 56614 CATGCAGATATTTGTTAAAACCCTGACCGGTAAAACCATAACCTTGGAGGTGGAACCTTC 56555 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| | || || | || || || || || ||||| |||||||| || || || || Sbjct 56554 CGACACCATCGAAAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCAGACCA 56495 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | || || | || || |||||| ||||||| || || | ||||| ||||| Sbjct 56494 GCAGAGATTGATTTTTGCGGGTAAACAACTGGAAGATGGTCGCACTCTGTCCGACTACAA 56435 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCA 27216 ||| ||||||||||| || | || |||||||||||| | || ||||||| Sbjct 56434 CATCCAAAAGGAGTCCACTCTCCACTTGGTTTTGCGTCTTCGCGGTGGCA 56385 Score = 147 bits (162), Expect = 2e-30 Identities = 171/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| ||||| |||||||| || | || || | ||||||||||| || Sbjct 57526 CATGCAGATCTTTGTTAAAACCCTGACCGGTAAAACCATCACCTTGGAAGTGGAACCTTC 57467 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | ||||| | || || || ||||| |||||||||||||| || || ||||| Sbjct 57466 TGACACCATTGAAAATGTGAAGGCCAAGATTCAGGACAAAGAAGGCATTCCCCCAGATCA 57407 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||||| | || | ||| || |||||| | ||||| | || | ||||| || || Sbjct 57406 GCAGCGACTTATCTTCGCTGGTAAACAACTAGAAGATGGGCGCACATTGTCCGACTATAA 57347 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || || ||||| ||| | ||| |||| |||||| | || |||||||| Sbjct 57346 CATCCAGAAAGAGTCCACCCTTCATCTGGTATTGCGTCTCCGTGGTGGCAT 57296 Score = 141 bits (156), Expect = 8e-29 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| ||||| ||||| || || | || || | || |||||||| || Sbjct 56842 CATGCAGATCTTTGTTAAAACCCTGACTGGTAAAACCATCACCTTGGAGGTGGAACCTTC 56783 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | ||||| | || || || ||||| |||||||||||||| || || || || Sbjct 56782 TGACACCATTGAAAATGTGAAGGCCAAGATTCAGGACAAAGAAGGCATTCCCCCAGACCA 56723 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||| | || | ||| || |||||| ||||||| || || | ||||| || || Sbjct 56722 GCAGCGTCTTATCTTCGCGGGTAAACAACTGGAAGATGGTCGCACTTTGTCCGACTATAA 56663 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || || ||||| ||| | ||| |||| ||||| | || |||||||| Sbjct 56662 CATCCAGAAAGAGTCCACCCTTCATCTGGTGCTGCGTCTCCGTGGTGGCAT 56612 Score = 141 bits (156), Expect = 8e-29 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| ||||| ||||| || || | || || | || |||||||| || Sbjct 57298 CATGCAGATCTTTGTTAAAACCCTGACTGGTAAAACCATAACCTTAGAGGTGGAACCTTC 57239 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| | || || | || || || || || ||||| || ||||| || || ||||| Sbjct 57238 CGACACTATCGAAAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCA 57179 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||| | || | ||| || |||||||||||||| || || | ||||| || || Sbjct 57178 GCAGCGTCTTATCTTCGCGGGTAAACAATTGGAAGATGGTCGCACTTTGTCCGACTATAA 57119 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || || ||||| ||| | ||| |||| |||||| | || |||||||| Sbjct 57118 CATCCAGAAAGAGTCCACCCTTCATCTGGTGTTGCGTCTCCGTGGTGGCAT 57068 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || |||||||| ||||| || | |||||||| || ||||| || || Sbjct 58209 ATGCAGATTTTCGTTAAAACTCTCACCGGTAAAACCATTACTCTCGAGGTGGAGCCTTCT 58150 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || ||| ||||||||||||||||| || || ||||| || ||| Sbjct 58149 GACACCATAGAAAATGTAAAAGCTAAAATTCAAGACAAAGAGGGTATTCCACCAGACCAA 58090 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | |||| || || || ||||||||||| | || | || || |||||| Sbjct 58089 CAAAGACTGATATTTGCTGGTAAGCAATTGGAAGATGGGCGCACTTTGTCAGACTACAAC 58030 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || || || || | ||||| || || ||| | || |||||||| Sbjct 58029 ATCCAGAAAGAATCTACTCTTCATTTAGTATTACGTCTCCGTGGTGGCAT 57980 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| |||||||| ||| | || ||||| | || || | ||||| || | || Sbjct 57982 CATGCAGATCTTTGTAAAGACTTTAACTGGCAAAACAATAACCTTAGAAGTTGAGTCATC 57923 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 || | ||||||| || || || || || |||||||||||||| || || ||||| Sbjct 57922 GGATACTATTGAGAATGTGAAGGCCAAGATCCAGGACAAAGAAGGCATTCCTCCAGATCA 57863 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | || || | ||| || ||||| |||||||| || || | || || || || Sbjct 57862 GCAGAGATTGATTTTCGCAGGTAAACAGTTGGAAGATGGTCGCACTTTGTCTGACTATAA 57803 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || |||||||| ||| | ||| | || ||||| | || |||||||| Sbjct 57802 CATCCAGAAGGAGTCCACCCTTCATCTAGTGCTGCGTCTCCGTGGTGGCAT 57752 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || |||||||| || || || || ||||||| ||||| ||||| ||||| Sbjct 58437 ATGCAGATCTTCGTAAAAACCCTCACTGGTAAAACTATTACCCTTGAGGTGGAGCCGTCT 58378 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | || || || ||||||||||| ||||| || || || ||||| Sbjct 58377 GATACCATCGAAAACGTGAAGGCTAAGATTCAAGACAAGGAAGGTATTCCCCCAGATCAG 58318 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || | || | ||| || || || | |||||| | || |||| || ||||| Sbjct 58317 CAACGCCTGATCTTCGCAGGAAAGCAGCTCGAAGACGGACGTACACTTTCAGACTACAAT 58258 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||| || || || | || | ||| | ||| | || || || || Sbjct 58257 ATTCAAAAAGAATCTACACTTCACCTTGTTCTACGTCTTCGTGGAGGGAT 58208 >seq27819 Length=1354 Score = 140 bits (154), Expect = 3e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| ||||| || ||||| ||| | || ||| | ||||| ||||| || Sbjct 1087 ATGCAGATCTTTGTCAAAACCCTCACCGGGAAGACCATCACTTTGGAAGTTGAACCATCT 1146 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| |||||| |||||||| |||||||| || || || || || ||| Sbjct 1147 GACACTATCGAGAATGTCAAAGCCAAAATTCAGGACAAAGAGGGGATTCCCCCTGACCAA 1206 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | || | |||||||| ||||||||||| | || | || || |||||| Sbjct 1207 CAACGTCTTATCTTTGCCGGCAAGCAATTGGAAGATGGCCGTACACTGTCGGACTACAAC 1266 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||| || || | ||||| || || | ||||| || || || Sbjct 1267 ATCCAGAAGGAATCCACTCTGCATTTAGTATTAAGATTGCGAGGAGGTAT 1316 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || || || |||||| | || || | ||||| || || || Sbjct 631 ATGCAGATCTTTGTGAAGACACTCACTGGCAAGACCATCACATTAGAAGTTGAGCCATCA 690 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| || || ||||| ||||||||||| || || || || || ||| Sbjct 691 GACACAATTGAGAATGTAAAGGCTAAAATCCAAGACAAAGAGGGGATTCCTCCTGACCAA 750 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | |||||||| ||||| ||||| | || ||||||| |||||| Sbjct 751 CAGCGACTTATTTTTGCCGGCAAGCAATTAGAAGATGGACGCACTCTTTCCGACTACAAC 810 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| ||||| || || | ||||| || ||| | ||||| || || || Sbjct 811 ATTCAGAAGGAATCCACTCTTCATTTAGTATTGAGATTGCGAGGAGGTAT 860 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || || |||||| ||||||| | ||||| || || || Sbjct 403 ATGCAGATCTTCGTTAAGACCCTTACTGGCAAGACTATTACATTAGAAGTTGAGCCATCG 462 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || ||| |||||||| ||||| ||||| || || || || ||| Sbjct 463 GACACAATTGAAAATGTGAAAGCTAAAATTCAGGACAAGGAAGGAATTCCCCCTGACCAA 522 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | || ||||| ||||||||||| | ||| | ||||| |||||| Sbjct 523 CAGCGTCTTATCTTTGCTGGCAAGCAATTGGAAGATGGCCGCACCCTCTCCGACTACAAC 582 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||| || || | ||||| || | ||| | | ||||| || Sbjct 583 ATCCAGAAGGAATCAACACTTCATTTAGTACTTCGTCTAAGAGGTGGTAT 632 >seq504 Length=80497 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || || || |||||| ||||||| || ||||| || || || Sbjct 73117 ATGCAGATCTTTGTCAAGACACTCACTGGCAAGACTATTACACTGGAAGTTGAGCCATCG 73176 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||||| || ||| ||||||||||||||||||||||| || || || ||| Sbjct 73177 GATACAATTGAGAATGTTAAAGCCAAAATTCAAGACAAAGAAGGCATTCCTCCTGACCAA 73236 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | || | || ||||| || | ||||| | || | ||||| |||||| Sbjct 73237 CAACGTCTTATCTTTGCTGGCAAGCAGCTTGAAGATGGACGCACTCTCTCCGACTACAAC 73296 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||| ||||| | ||||| || | ||| | | ||||| || Sbjct 73297 ATCCAGAAGGAATCGACTCTTCATTTAGTACTTCGTCTAAGAGGTGGTAT 73346 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || || || |||||| ||||||| || ||||| || || || Sbjct 74124 ATGCAGATCTTTGTCAAGACACTCACTGGCAAGACTATTACACTGGAAGTTGAGCCTTCG 74183 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||||| || ||| ||||| ||||||||||| || || || || || ||| Sbjct 74184 GATACAATTGAGAATGTGAAAGCTAAAATCCAAGACAAAGAGGGGATTCCTCCTGACCAA 74243 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | |||||||| || | ||||| | ||| | ||||| |||||| Sbjct 74244 CAGCGACTTATTTTTGCCGGCAAGCAGCTTGAAGATGGCCGCACCCTCTCCGACTACAAC 74303 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGT 27196 || || ||||| || || | |||||||| Sbjct 74304 ATCCAGAAGGAATCCACTCTGCATTTGGT 74332 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| || || || ||||||||| | || || | || || || || || Sbjct 72204 CATGCAGATCTTTGTGAAGACCCTCACCGGCAAGACCATCACATTGGAGGTTGAGCCATC 72263 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | || |||| || || || || |||||||| || || || || || || || Sbjct 72264 TGACACTATCGAGAATGTGAAGGCCAAGATCCAAGACAAGGAGGGGATTCCCCCTGACCA 72323 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| || ||||||| ||| ||||| ||||||||||| | || | ||||| || || Sbjct 72324 ACAACGGTTAATATTCGCTGGCAAGCAATTGGAAGATGGCCGCACTCTCTCCGACTATAA 72383 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGT 27196 |||||| |||||||| ||||| || || || Sbjct 72384 CATTCAGAAGGAGTCCACCTTGCACTTAGT 72413 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || || || |||||| ||||||| | ||||| || || || Sbjct 72661 ATGCAGATCTTTGTGAAGACACTCACTGGCAAGACTATTACATTAGAAGTTGAGCCATCG 72720 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || ||| |||||||| |||||||| || || || || || ||| Sbjct 72721 GATACAATTGAAAATGTGAAAGCTAAAATTCAGGACAAAGAGGGGATTCCTCCTGACCAA 72780 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | || | |||||||| ||||||||||| | || | || || |||||| Sbjct 72781 CAACGTCTTATCTTTGCCGGCAAGCAATTGGAAGATGGCCGTACACTGTCAGACTACAAC 72840 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || || || || | ||||| || ||| | ||| | || || || Sbjct 72841 ATTCAGAAAGAATCCACTCTGCATTTAGTGTTGAGATTGAGAGGAGGAAT 72890 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || || ||||| ||| | || || | || || || || || Sbjct 73896 ATGCAGATCTTTGTGAAGACACTCACCGGAAAGACCATCACATTGGAGGTTGAGCCATCT 73955 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || ||||||||||||||||| || || || || || ||| Sbjct 73956 GACACTATTGAAAATGTGAAGGCCAAAATTCAAGACAAAGAGGGGATTCCCCCTGACCAA 74015 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | || | |||||||| |||||||||||| | || | || || |||||| Sbjct 74016 CAACGTCTTATCTTTGCCGGCAAGCAATTGGAAGACGGCCGTACACTGTCGGACTACAAC 74075 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || || || || | ||||| || ||| | ||| | || || || Sbjct 74076 ATCCAGAAAGAATCCACTCTGCATTTAGTATTGAGATTGAGAGGAGGTAT 74125 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || || ||||| ||| | || || | || || || || || Sbjct 73345 ATGCAGATCTTTGTGAAGACCCTCACCGGAAAGACCATCACATTGGAGGTTGAGCCATCT 73404 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| || || || || |||||||| || || || || || || ||| Sbjct 73405 GACACTATCGAGAATGTGAAGGCCAAGATCCAAGACAAGGAGGGGATTCCCCCTGACCAA 73464 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || ||||||| || ||||| ||||||||||| | ||| | || || |||||| Sbjct 73465 CAACGGTTAATATTTGCTGGCAAGCAATTGGAAGATGGCCGCACCCTCTCTGACTACAAC 73524 Query 27168 ATTCAAAAGGAGTCGAC 27184 ||||| ||||| || || Sbjct 73525 ATTCAGAAGGAATCAAC 73541 >seq87 Length=431742 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || || || || ||| | || || || || ||||| | || Sbjct 313409 ATGCAAATCTTCGTGAAGACCCTAACGGGAAAGACAATCACCCTCGAGGTGGAGGCCTCT 313468 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| || || || || || |||||||| ||||| || ||||| || Sbjct 313469 GACACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAAGAGGGCATTCCTCCCGACCAG 313528 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||||||||| || ||||||| || || |||| || |||||| Sbjct 313529 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGTCGCACTCTTTCTGACTACAAC 313588 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||||| ||||||||||| | || ||||| | ||| | || ||||| Sbjct 313589 ATTCAGAAGGAGTCGACTCTCCACTTGGTGCTACGTCTTCGTGGTGG 313635 >seq536 Length=598245 Score = 95.1 bits (104), Expect = 1e-14 Identities = 108/143 (76%), Gaps = 4/143 (3%) Strand=Plus/Plus Query 49784 TAGAAGGTTTGGTACTAAAACCGATCA--ATTCTGTATACGCACCCGGTAAAAGACATTG 49841 |||||||||| |||||||| |||| | || |||||| || |||||||||||||| Sbjct 183334 TAGAAGGTTTAGTACTAAAG--GATCTTGAATCAATATACGAGCCGGGTAAAAGACATTG 183391 Query 49842 GTTGAAAATTAAAAAAGACTACTTGTGCGATGGCGCCATGGCCGATAGCGTTGATTTGGT 49901 ||||||| | ||||| || || |||| || || || ||||| |||| | |||| | || Sbjct 183392 GTTGAAAGTAAAAAAGGATTATTTGTTTGACGGAGCAATGGCAGATACAGCTGATCTTGT 183451 Query 49902 GGTTTTGGGTGCATGGTACGGTT 49924 ||| | ||||| |||| |||| Sbjct 183452 TGTTCTTGGTGCCTGGTTTGGTT 183474 >seq468 Length=381535 Score = 82.4 bits (90), Expect = 7e-11 Identities = 74/93 (80%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 135649 AGGTTGTATGTGGTCTATTTGCGGTGTACACGATCAAGGATGGAAGGAGCGCAAAGTGTT 135708 ||| || |||||||| || ||||| | ||||| ||||| ||| ||||||| |||||| Sbjct 193536 AGGGTGCATGTGGTCGATCTGCGGCATCCACGACCAAGGCTGGGCGGAGCGCGCAGTGTT 193595 Query 135709 TGGCAAGATTCGCTATATGAACTATGACGGTTG 135741 |||||| | ||||| ||||||||||| || || Sbjct 193596 CGGCAAGGTGCGCTACATGAACTATGAGGGATG 193628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434755430639040