Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lerema_20accius_20[genbank_20GCA_5F001278395.1_202015-09-02] 29,977 sequences; 298,169,737 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq87 168 2e-36 seq397 167 6e-36 seq504 147 5e-30 seq27819 136 1e-26 seq963 102 2e-16 >seq87 Length=431742 Score = 168 bits (186), Expect = 2e-36 Identities = 167/214 (78%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| |||| |||||||| || || || ||||| || ||||||||||||||||| Sbjct 313406 AAAATGC---AAATCTTCGTGAAGACCCTAACGGGAAAGACAATCACCCTCGAGGTGGAG 313462 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 ||| |||||||||||||| || || ||||| ||||||||||| || || ||||| Sbjct 313463 GCCTCTGACACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAAGAGGGCATTCCTCCC 313522 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 |||||||| || || ||||||||||| || ||||| |||||||| | |||||| | || Sbjct 313523 GACCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGTCGCACTCTTTCTGAC 313582 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTG 178128 || ||| | || || || || || || || |||| Sbjct 313583 TACAACATTCAGAAGGAGTCGACTCTCCA-CTTG 313615 >seq397 Length=962699 Score = 167 bits (184), Expect = 6e-36 Identities = 161/207 (78%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| ||||| ||||| || ||||| || ||||| |||||||| || || Sbjct 58434 CAGATCTTCGTAAAAACCCTCACTGGTAAAACTATTACCCTTGAGGTGGAGCCGTCTGAT 58375 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || |||||||| ||||| ||||| || || || || |||||| Sbjct 58374 ACCATCGAAAACGTGAAGGCTAAGATTCAAGACAAGGAAGGTATTCCCCCAGATCAGCAA 58315 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| ||||| ||||||||||| ||| | || ||| | || || || | Sbjct 58314 CGCCTGATCTTCGCAGGAAAGCAGCTCGAAGACGGACGTACACTTTCAGACTACAATATT 58255 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 ||||||||||| ||||| || |||||| Sbjct 58254 CAAAAAGAATCTACACTTCACCTTGTT 58228 Score = 159 bits (176), Expect = 8e-34 Identities = 159/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || ||||| || || || ||||| |||||| | ||||||||| || ||| Sbjct 56838 CAGATCTTTGTTAAAACCCTGACTGGTAAAACCATCACCTTGGAGGTGGAACCTTCTGAC 56779 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || || |||||||||||||||||||| || || || |||||||| Sbjct 56778 ACCATTGAAAATGTGAAGGCCAAGATTCAGGACAAAGAAGGCATTCCCCCAGACCAGCAG 56719 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||||||||| || ||||| || |||||||| | ||| | |||| |||||| || Sbjct 56718 CGTCTTATCTTCGCGGGTAAACAACTGGAAGATGGTCGCACTTTGTCCGACTATAACATC 56659 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || ||||| || || || ||||| || Sbjct 56658 CAGAAAGAGTCCACCCTTCATCTGGT 56633 Score = 156 bits (172), Expect = 1e-32 Identities = 164/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || ||||| || || || ||||| |||||| | || |||||| || ||| Sbjct 57522 CAGATCTTTGTTAAAACCCTGACCGGTAAAACCATCACCTTGGAAGTGGAACCTTCTGAC 57463 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || || |||||||||||||||||||| || || || || ||||| Sbjct 57462 ACCATTGAAAATGTGAAGGCCAAGATTCAGGACAAAGAAGGCATTCCCCCAGATCAGCAG 57403 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||||||||||||| || ||||| || |||||||| | || | |||| |||||| || Sbjct 57402 CGACTTATCTTCGCTGGTAAACAACTAGAAGATGGGCGCACATTGTCCGACTATAACATC 57343 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 || ||||| || || || ||||| || ||| | ||| Sbjct 57342 CAGAAAGAGTCCACCCTTCATCTGGTATTGCGTCTC 57307 Score = 147 bits (162), Expect = 5e-30 Identities = 162/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || ||||| || || || ||||| |||||| | ||||||||| || ||| Sbjct 57066 CAGATCTTTGTTAAAACCCTGACTGGTAAAACCATCACCTTGGAGGTGGAACCTTCCGAC 57007 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || ||||| |||||||| ||||| || ||||| |||||||| Sbjct 57006 ACCATCGAAAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCAGACCAGCAG 56947 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || || || || |||||| | |||||||| | ||| | | || |||||| || Sbjct 56946 AGATTGATTTTTGCAGGTAAACAGTTGGAAGATGGTCGCACTTTGTCTGACTATAACATC 56887 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 || |||||||| || || ||||| || ||| | ||| Sbjct 56886 CAGAAAGAATCCACCCTTCATCTGGTGTTGCGTCTC 56851 Score = 147 bits (162), Expect = 5e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || ||||| || || || ||||| |||||| | |||||||| || ||| Sbjct 57750 CAGATCTTTGTTAAAACCCTGACCGGTAAAACCATCACCTTGGAGGTGGAGCCTTCTGAC 57691 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || ||||| |||||||| ||||| || || || |||||||| Sbjct 57690 ACCATCGAAAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCAGCAG 57631 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||||||||| || ||||| || |||||||| | ||| | | || |||||| || Sbjct 57630 CGTCTTATCTTCGCGGGTAAACAACTGGAAGATGGTCGCACTTTGTCTGACTATAACATC 57571 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || ||||| || || || ||||| || Sbjct 57570 CAGAAAGAGTCCACCCTTCATCTGGT 57545 Score = 138 bits (152), Expect = 3e-27 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || ||||| || || || ||||| || ||| | ||||||||| || ||| Sbjct 57294 CAGATCTTTGTTAAAACCCTGACTGGTAAAACCATAACCTTAGAGGTGGAACCTTCCGAC 57235 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || ||||| |||||||| || || || || || || ||||| Sbjct 57234 ACTATCGAAAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCAGCAG 57175 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||||||||| || ||||| | |||||||| | ||| | |||| |||||| || Sbjct 57174 CGTCTTATCTTCGCGGGTAAACAATTGGAAGATGGTCGCACTTTGTCCGACTATAACATC 57115 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTC 178139 || ||||| || || || ||||| || ||| | ||| Sbjct 57114 CAGAAAGAGTCCACCCTTCATCTGGTGTTGCGTCTC 57079 Score = 136 bits (150), Expect = 1e-26 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || ||||| || || || ||||| || ||| | ||||||||| || ||| Sbjct 56610 CAGATATTTGTTAAAACCCTGACCGGTAAAACCATAACCTTGGAGGTGGAACCTTCCGAC 56551 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || ||||| |||||||| ||||| || ||||| |||||||| Sbjct 56550 ACCATCGAAAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCTCCAGACCAGCAG 56491 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || || || || ||||| || |||||||| | ||||| |||| || ||| || Sbjct 56490 AGATTGATTTTTGCGGGTAAACAACTGGAAGATGGTCGCACTCTGTCCGACTACAACATC 56431 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 ||||| || || || || || | |||||| Sbjct 56430 CAAAAGGAGTCCACTCTCCACTTGGTTTTG 56401 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| ||||||||||| || ||||| || || ||||||||||| || ||| Sbjct 58206 CAGATTTTCGTTAAAACTCTCACCGGTAAAACCATTACTCTCGAGGTGGAGCCTTCTGAC 58147 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || ||| || ||||| |||||||| || || || || ||||| ||| Sbjct 58146 ACCATAGAAAATGTAAAAGCTAAAATTCAAGACAAAGAGGGTATTCCACCAGACCAACAA 58087 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| || || || || || || | |||||||| | ||| | | || || ||| || Sbjct 58086 AGACTGATATTTGCTGGTAAGCAATTGGAAGATGGGCGCACTTTGTCAGACTACAACATC 58027 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTT 178132 || |||||||| || || ||| | || || Sbjct 58026 CAGAAAGAATCTACTCTTCATTTAGTATT 57998 Score = 127 bits (140), Expect = 5e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| ||||||||| | || || ||||| |||||| | || || || || || Sbjct 58662 CAAATTTTTGTGAAAACTTTAACTGGTAAAACTATCACCTTGGAAGTTGAGCCATCCGAT 58603 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || ||| ||| ||||| ||||| ||||| || || || || ||||| Sbjct 58602 ACAATTGAAAATGTAAAAGCAAAAATTCAAGACAAGGAAGGCATACCACCTGATCAGCAG 58543 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | || ||||| || || || | ||||| ||| | |||||| | ||||| || | Sbjct 58542 CGATTGATTTTCGCGGGCAAGCAATTAGAAGACGGACGTACTCTTTCGGATTACAATATT 58483 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 ||||||||||| || || || || || ||| Sbjct 58482 CAAAAAGAATCTACTCTTCACCTCGTCTTG 58453 Score = 105 bits (116), Expect = 2e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || ||| | || || ||||| || ||| | || || || || || Sbjct 57978 CAGATCTTTGTAAAGACTTTAACTGGCAAAACAATAACCTTAGAAGTTGAGTCATCGGAT 57919 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || ||||| || || ||||| |||||||||||||| || ||||| || ||||| Sbjct 57918 ACTATTGAGAATGTGAAGGCCAAGATCCAGGACAAAGAAGGCATTCCTCCAGATCAGCAG 57859 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || ||||| || |||||| | |||||||| | ||| | | || |||||| || Sbjct 57858 AGATTGATTTTCGCAGGTAAACAGTTGGAAGATGGTCGCACTTTGTCTGACTATAACATC 57799 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || ||||| || Sbjct 57798 CAGAAGGAGTCCACCCTTCATCTAGT 57773 >seq504 Length=80497 Score = 147 bits (162), Expect = 5e-30 Identities = 153/201 (76%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || ||||| || || || || || || || || || || ||| Sbjct 72436 CAGATCTTTGTCAAGACCCTCACTGGCAAGACTATTACACTGGAAGTTGAGCCATCCGAC 72495 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || |||||||| |||||| || ||||||||||| |||||||| || || |||||||| Sbjct 72496 ACTATCGAGAATGTCAAAGCCAAAATTCAGGACAAGGAAGGAATTCCCCCTGACCAGCAG 72555 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||||||||| ||||| || ||||||||| | ||||| |||| || || || Sbjct 72556 CGTCTTATCTTCGCCGGTAAACAACTGGAAGATGGACGCACTCTCTCCGACTACAATATC 72615 Query 178104 CAAAAAGAATCAACACTGCAT 178124 || || ||||| || || ||| Sbjct 72616 CAGAAGGAATCCACTCTTCAT 72636 Score = 134 bits (148), Expect = 3e-26 Identities = 161/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || ||||| || || || || || || || || || || ||| Sbjct 72892 CAGATCTTTGTCAAGACACTCACTGGCAAGACTATTACACTGGAAGTTGAGCCATCTGAC 72951 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || ||||| |||||| || ||||||||||| || ||||| || || ||||| || Sbjct 72952 ACTATTGAGAATGTCAAAGCCAAAATTCAGGACAAGGAGGGAATTCCCCCTGACCAACAG 73011 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||||||||| || ||||| || |||||||| | || || | || || ||| || Sbjct 73012 CGTCTTATCTTCGCGGGTAAACAACTGGAAGATGGCCGTACACTGTCGGACTACAACATC 73071 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 || || ||||| || |||||| | || |||||| | ||| Sbjct 73072 CAGAAGGAATCCACTCTGCATTTAGTGTTGAGATTGAGA 73110 Score = 129 bits (142), Expect = 1e-24 Identities = 149/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || ||||| || || || || || || || || || || || Sbjct 73120 CAGATCTTTGTCAAGACACTCACTGGCAAGACTATTACACTGGAAGTTGAGCCATCGGAT 73179 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || ||||| || ||| || ||||| ||||||||||| || ||||| ||||| ||| Sbjct 73180 ACAATTGAGAATGTTAAAGCCAAAATTCAAGACAAAGAAGGCATTCCTCCTGACCAACAA 73239 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||| || || || ||||| ||||||||| | ||||| |||| || ||| || Sbjct 73240 CGTCTTATCTTTGCTGGCAAGCAGCTTGAAGATGGACGCACTCTCTCCGACTACAACATC 73299 Query 178104 CAAAAAGAATCAACACTGCAT 178124 || || ||||| || || ||| Sbjct 73300 CAGAAGGAATCGACTCTTCAT 73320 Score = 120 bits (132), Expect = 7e-22 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||| || ||||| || || || || || | || || || || || Sbjct 72664 CAGATCTTTGTGAAGACACTCACTGGCAAGACTATTACATTAGAAGTTGAGCCATCGGAT 72723 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || ||| || |||||||||||||| || || ||||| ||||| ||| Sbjct 72724 ACAATTGAAAATGTGAAAGCTAAAATTCAGGACAAAGAGGGGATTCCTCCTGACCAACAA 72783 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||| ||||| || || | |||||||| | || || | || || ||| | Sbjct 72784 CGTCTTATCTTTGCCGGCAAGCAATTGGAAGATGGCCGTACACTGTCAGACTACAACATT 72843 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 || |||||||| || |||||| | || |||||| | ||| Sbjct 72844 CAGAAAGAATCCACTCTGCATTTAGTGTTGAGATTGAGA 72882 >seq27819 Length=1354 Score = 136 bits (150), Expect = 1e-26 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || ||||| ||||| || || || ||||| | || || ||| || ||| Sbjct 1090 CAGATCTTTGTCAAAACCCTCACCGGGAAGACCATCACTTTGGAAGTTGAACCATCTGAC 1149 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || |||||||| |||||| || |||||||||||||| || || || || ||||| ||| Sbjct 1150 ACTATCGAGAATGTCAAAGCCAAAATTCAGGACAAAGAGGGGATTCCCCCTGACCAACAA 1209 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||| ||||| || || | |||||||| | || || | || || ||| || Sbjct 1210 CGTCTTATCTTTGCCGGCAAGCAATTGGAAGATGGCCGTACACTGTCGGACTACAACATC 1269 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGA 178136 || || ||||| || |||||| | || || ||| Sbjct 1270 CAGAAGGAATCCACTCTGCATTTAGTATTAAGA 1302 Score = 132 bits (146), Expect = 1e-25 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || ||||| ||||| || || || ||||| | || || ||| || || Sbjct 178 CAGATCTTTGTCAAAACCCTCACCGGGAAGACCATCACTTTGGAAGTTGAACCATCTGAT 237 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || ||| || ||||||||||| || ||||| || || |||||||| Sbjct 238 ACAATTGAAAATGTTAAAGCCAAAATTCAGGACAAGGAGGGAATTCCCCCTGACCAGCAG 297 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || ||| | |||||||| | || || |||||||||| || Sbjct 298 CGTCTCATCTTCGCTGGCAAGCAGTTGGAAGATGGCCGCACCCTCTCCGATTATAATATC 357 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGA 178136 || |||||||| || ||||| | || |||||| Sbjct 358 CAGAAAGAATCCACTTTGCATTTAGTATTGAGA 390 Score = 123 bits (136), Expect = 6e-23 Identities = 148/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || || ||||| | || || ||| || || Sbjct 862 CAGATCTTCGTTAAGACCCTCACCGGGAAGACCATCACTTTGGAAGTTGAACCATCTGAT 921 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || ||| || ||||||||||| || ||||| || || |||||||| Sbjct 922 ACAATTGAAAATGTTAAAGCCAAAATTCAGGACAAGGAGGGAATTCCCCCTGACCAGCAG 981 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || ||| | |||||||| | || || |||||||||| || Sbjct 982 CGTCTCATCTTCGCTGGCAAGCAGTTGGAAGATGGCCGCACCCTCTCCGATTATAATATC 1041 Query 178104 CAAAAAGAATCAACACTGCAT 178124 || |||||||| || ||||| Sbjct 1042 CAGAAAGAATCCACCTTGCAT 1062 Score = 111 bits (122), Expect = 4e-19 Identities = 145/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || || || || || || || || | || || || || ||| Sbjct 406 CAGATCTTCGTTAAGACCCTTACTGGCAAGACTATTACATTAGAAGTTGAGCCATCGGAC 465 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || ||| || ||||||||||| |||||||| || || ||||| || Sbjct 466 ACAATTGAAAATGTGAAAGCTAAAATTCAGGACAAGGAAGGAATTCCCCCTGACCAACAG 525 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||| || || || || | |||||||| | || || |||| || ||| || Sbjct 526 CGTCTTATCTTTGCTGGCAAGCAATTGGAAGATGGCCGCACCCTCTCCGACTACAACATC 585 Query 178104 CAAAAAGAATCAACACTGCAT 178124 || || ||||||||||| ||| Sbjct 586 CAGAAGGAATCAACACTTCAT 606 Score = 107 bits (118), Expect = 5e-18 Identities = 119/159 (75%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 177978 TCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGAC 178037 || || || || || || |||||| || ||||||||||| || ||||| || || ||| Sbjct 4 TCTGATACAATTGAAAATGTCAAAGCCAAAATTCAGGACAAGGAGGGAATTCCCCCTGAC 63 Query 178038 CAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTAT 178097 ||||| || |||||||| ||||| || || | |||||||| | || || | || || Sbjct 64 CAGCAGCGTCTTATCTTTGCCGGCAAGCAATTAGAAGATGGCCGCACCCTCTCGGACTAC 123 Query 178098 AACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGA 178136 ||| |||| || |||||||| || ||| | || |||||| Sbjct 124 AACATCCAGAAGGAATCAACTCTTCATTTAGTATTGAGA 162 >seq963 Length=295340 Score = 102 bits (112), Expect = 2e-16 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || |||||||| || || || ||||| || ||||| || |||||| Sbjct 1996 CAGATCTTCGTTAAGACTCTCACGGGCAAGACCATCACTCTTGAGGTTGAGCCCTCAGAT 1937 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCA 178042 |||||||| || |||||| ||||| || ||||| || |||||||||||||| ||||| Sbjct 1936 ACCATCGAAAATGTCAAAGCCAAGATCCAAGACAAGGAGGGAATCCCTCCGGATCAGCA 1878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203268870544538