Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq1037836 102 2e-16 seq1065883 100 6e-16 seq1561256 98.7 2e-15 seq1268732 98.7 2e-15 seq315950 95.1 3e-14 seq586925 89.7 1e-12 seq1064196 87.8 4e-12 seq188415 87.8 4e-12 seq1577286 84.2 5e-11 >seq1037836 Length=504 Score = 102 bits (112), Expect = 2e-16 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 ||||||| ||||||||||||||||||| | ||||| ||||||| | |||||||||||||| Sbjct 88 TTGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGA 147 Query 165768 GCCCCACGATGGGC 165781 |||||||| ||||| Sbjct 148 GCCCCACGTTGGGC 161 >seq1065883 Length=515 Score = 100 bits (110), Expect = 6e-16 Identities = 78/93 (84%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 61081 GAATTTGTCAAGCATCAACATCTGAACTGTATGGAAAAGTTCAAGAAATTCCTCAAACAG 61140 |||||| |||||||||||||||||| | ||||||||||| |||||| | |||||||||| Sbjct 401 GAATTTACCAAGCATCAACATCTGAATTATATGGAAAAGTACAAGAAGTACCTCAAACAG 460 Query 61141 AAAGGACTCCGTTTTATCCTCGTAGCCCGTATG 61173 ||| ||||| || ||||| | ||||| |||| Sbjct 461 AAACAACTCCTTTCTATCCAAGAAGCCCATATG 493 >seq1561256 Length=1203 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| | ||||| ||||||| | |||||||||||||||| Sbjct 748 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 807 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 808 CCCACGTTGGGC 819 >seq1268732 Length=629 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| | ||||| ||||||| | |||||||||||||||| Sbjct 460 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 519 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 520 CCCACGTTGGGC 531 >seq315950 Length=345 Score = 95.1 bits (104), Expect = 3e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| | ||||| ||||||| | ||||||||||||||| Sbjct 170 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTAGGGGTCGTGGGTTCGAGT 229 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 230 CCCACGTTGGGC 241 >seq586925 Length=389 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||| | ||| | ||||| ||||||| | |||||||||||||||| Sbjct 318 GCCCGGCTAGCTCAGTCGGGAAAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 259 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 258 CCCACGTTGGGC 247 >seq1064196 Length=515 Score = 87.8 bits (96), Expect = 4e-12 Identities = 57/63 (90%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 165718 AGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCCACGAT 165777 ||||||||||||||||| | ||||| ||||||| | |||||||||||||||||||||| | Sbjct 515 AGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGCCCCACGTT 456 Query 165778 GGG 165780 ||| Sbjct 455 GGG 453 >seq188415 Length=326 Score = 87.8 bits (96), Expect = 4e-12 Identities = 57/63 (90%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 165711 CCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCC 165770 |||| ||||||||||||||||||| | ||||| ||||||| | ||||||||||||||||| Sbjct 63 CCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGCC 4 Query 165771 CCA 165773 ||| Sbjct 3 CCA 1 >seq1577286 Length=1288 Score = 84.2 bits (92), Expect = 5e-11 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 165721 TCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCCACGATGGG 165780 |||||||||||||| | ||||| ||||||| | |||||||||||||||||||||| |||| Sbjct 1 TCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGCCCCACGTTGGG 60 Query 165781 C 165781 | Sbjct 61 C 61 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1035277210016280