Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq1644865 201 1e-46 >seq1644865 Length=2180 Score = 201 bits (222), Expect = 1e-46 Identities = 502/755 (66%), Gaps = 12/755 (2%) Strand=Plus/Minus Query 16663 AACACC-CATTCTTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTA 16721 |||||| |||| |||| || || | || | || || || || |||||||| || || | Sbjct 791 AACACCACATT-TTTGATATTCACCTACTCTCTTCTCAAAGAAATTAGTTTTCCCTTCGA 733 Query 16722 GAGATATATTCTCCATGAAATCAAAAGGATTAGTAGCTGAAAA-TATTTTAGAGTACCCC 16780 | || |||||||||||||| || |||||||| | || | | | ||| | ||| Sbjct 732 GGGAAATATTCTCCATGAAGTCTAAAGGATTTTCAACTTTATAGTGCTTTTCACATCCCA 673 Query 16781 AGTTCGGCGATTAA---TCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAG 16837 | | | ||||| |||||| || |||||||| || || || ||||||| || Sbjct 672 ACT----CTATTAAAAGTCTATCGGCGACAAATTCAATGTACTGTTTCATTAATGTACAA 617 Query 16838 TTCATTCCTATAAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACC 16897 |||||||| || ||| || || | || || || || ||| ||| || || ||| Sbjct 616 TTCATTCCAATTAGAGCAACGGGCAATGCATCTGTTAAGAATTCTTGTTCAATTGAAACG 557 Query 16898 GCTTCCTTAATAATACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAAC 16957 || || |||| || | || ||||| ||| ||| ||||| |||||| Sbjct 556 GCGTCTGTAATTATTTCCGTGACAGTTTCCTTACTAGGTTTATTAACCAGATGCTTAAAC 497 Query 16958 ATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAAT 17017 || | || ||||||||| ||| | || || || || |||||||||||| ||| Sbjct 496 ATTAAGCACGCGAAATCGGTATGAAGACCTTCATCCCTAGATATAAGTTCGTTACTAAAA 437 Query 17018 GTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAA 17077 || | || |||||| ||||| ||||| | |||||| || || || || || ||| Sbjct 436 GTAAGTCCTGGCATCAGTCCTCTCTTCTTGAGCCAAAAAATAGCAGCAAAAGATCCACTG 377 Query 17078 AAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTG 17137 || ||||| || || || || |||||||| | | || ||||||||| | || |||| Sbjct 376 AAAAATATCCCTTCAACAGAGGCAAACGCAACAACTCTTTCGGCGTAAGAAGCTTCTTCA 317 Query 17138 TTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATG 17197 || | |||||| |||| |||||||| | || | || | ||||| ||| Sbjct 316 TTGCCAATCCAACATAAAGCCCAGTCGGCTTTCTTTTTGACACATGGGAGAGTTTCGATG 257 Query 17198 GCCTTAAATAATTTCTCTTTTTCCTGTAGG-TCGATTATATACGTATCGATGAGTAGGCT 17256 || ||||| | |||| ||||| || |||| || |||||| |||||||| |||| || Sbjct 256 GCGTTAAAGAGTTTC-GTTTTTTCTTTAGGATCAGATATATAGGTATCGATCAGTAAACT 198 Query 17257 GTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTC 17316 |||||||| ||| | ||| || || ||||| || ||||||||| | | ||||| Sbjct 197 ATACATTTCACTGTGAACGTTTTCGATCATAATCTGGAAACCGTAAAAGAACCTTGCTTC 138 Query 17317 CGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCT 17376 | | ||||| || | |||| | ||| | | || ||||| || || || || Sbjct 137 AGGAACTTGAATCTCTTGGCAGAACCTCTCCACCAAGTTCTCGTTGACAATTCCATCCGA 78 Query 17377 CGCGGCGAAAAACGCCAATATATGCTTAATGAAAT 17411 || || || || |||| | ||| ||||||| Sbjct 77 TGCAGCAAAGAATGCCAGAACATGGGAGATGAAAT 43 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506783523898080