Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq1643672 122 6e-23 seq1643959 84.2 2e-11 >seq1643672 Length=2139 Score = 122 bits (134), Expect = 6e-23 Identities = 166/230 (72%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 102037 ATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATC 102096 |||| |||||| ||||| ||||||||||| ||||| ||||| || | ||||||||| || Sbjct 741 ATATGATGCTCCAAAATGTCTCCACTGAAACCCATATACAGGACCCAAATCTCCTTCCTC 682 Query 102097 TCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTG 102156 |||||| |||||| | |||| | |||| ||| || || |||||| || || Sbjct 681 TCTGTCTGTAAAACCTAAACTATCAAGAAATTCTCTGGAAGAGTTTTGATCCCATATATG 622 Query 102157 CACGCCAGCTGCTGA--TAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGT 102214 || || | || | ||| |||||| | || ||||| || |||||||| | | Sbjct 621 AACTCC--TTTCTCACTTAGTTCTTTGGCATTTGTTGATCCCCTAATAAACCATAGTAAC 564 Query 102215 TCTTCAACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAA 102264 ||||||| || ||||||||||| |||||||| || || | | |||||| Sbjct 563 TCTTCAAACACTCCTCTCCAAAACACTCTCTTGGTTGTAAGTAATGGAAA 514 >seq1643959 Length=2149 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/215 (70%), Gaps = 3/215 (1%) Strand=Plus/Plus Query 101752 AGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCC 101811 ||| |||| || |||||| ||| || | | ||| |||||||||||||| || || || Sbjct 1356 AGTTACATTTGCGATCATGTGAGTCAACAAGGCATAACTAGCAATGTTAAACGGTACCCC 1415 Query 101812 TAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATA 101871 | || | ||| || || | |||||| |||||||| || || | ||||| ||| || Sbjct 1416 AAGTCCAACATCTGCAGAACGTTGATAAAGTTGACAAGATAGTTCTCCATTGGCGACGTA 1475 Query 101872 AAATTGACTTAATACA-TGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCC 101930 ||| |||| ||||| ||||| || || | |||||||| | ||| | ||||| Sbjct 1476 AAACTGAC-ACATACAGTGACATGGAGGGAGAGCCATTTTACCCACGTCCACAGGATTCC 1534 Query 101931 AAGCACACATTAACATCCTTCTATCTGTAGGGTTT 101965 | ||||| | | || || | ||| ||| ||||| Sbjct 1535 ATGCACAAAGAAGAATTCTCCGATC-GTAAGGTTT 1568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 353926980484556