Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq1643959 102 6e-17 seq1643672 91.5 1e-13 >seq1643959 Length=2149 Score = 102 bits (112), Expect = 6e-17 Identities = 167/238 (70%), Gaps = 2/238 (1%) Strand=Plus/Plus Query 97115 CAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCC 97174 |||| |||| |||||||| ||| || | | ||| |||||||||||||| || |||| Sbjct 1355 CAGTTACATTTGCGATCATGTGAGTCAACAAGGCATAACTAGCAATGTTAAACGGTACCC 1414 Query 97175 CTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACAT 97234 | ||||| | ||| || || | |||||| | ||||| || || | ||||| || | Sbjct 1415 CAAGTCCAACATCTGCAGAACGTTGATAAAGTTGACAAGATAGTTCTCCATTGGCGACGT 1474 Query 97235 AAAACTGACTCAATACA-TGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTC 97293 ||||||||| | ||||| ||||| || || | |||||||| || || | |||| Sbjct 1475 AAAACTGACAC-ATACAGTGACATGGAGGGAGAGCCATTTTACCCACGTCCACAGGATTC 1533 Query 97294 CAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCT 97351 || ||||| | | ||||| | |||| || ||||| | || ||| ||||| || Sbjct 1534 CATGCACAAAGAAGAATTCTCCGATCGTAAGGTTTTGTCCGAATTTTATCAATTACCT 1591 >seq1643672 Length=2139 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/232 (69%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 97401 ATATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTC 97460 |||| |||||||||||| ||||| || || ||||| ||||| || | |||||||| || Sbjct 741 ATATGATGCTCCAAAATGTCTCCACTGAAACCCATATACAGGACCCAAATCTCCTTCCTC 682 Query 97461 TCTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTG 97520 ||| || ||||| | |||| | | | || || ||| |||||| || || Sbjct 681 TCTGTCTGTAAAACCTAAACTATCAAGAAATTCTCTGGAAGAGTTTTGATCCCATATATG 622 Query 97521 CACACCAGATGCTGCA---AGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAA 97577 || || | || || || |||||| | || ||||| || |||||||| | || Sbjct 621 AACTCC--TTTCT-CACTTAGTTCTTTGGCATTTGTTGATCCCCTAATAAACCATAGTAA 565 Query 97578 TTCTTCCACAACACCTCTCCAAAATACTCTCTTAGTTGTTAAGAGAGGAAAA 97629 ||||| | || ||||||||||| |||||||| ||||| | | |||||| Sbjct 564 CTCTTCAAACACTCCTCTCCAAAACACTCTCTTGGTTGTAAGTAATGGAAAA 513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 339753097014920