Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq678478 107 2e-18 seq1135619 104 2e-17 seq1488354 100 2e-16 seq770237 93.3 4e-14 seq663341 89.7 4e-13 >seq678478 Length=406 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 ||||||| | || | || || || |||| ||| ||||||||||| |||||||| || | Sbjct 227 TACCTCCTCTCAACCGCAGAACTAAATGGAGTGTGGACTCTTTTTGGATGTTGTAGTCAC 168 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 ||| || || ||| || || || |||||||| | || | | ||| |||||||| | Sbjct 167 TCAATGTACGACCATCTTCTAGTTGCTTTCCAGCAAAAATCAATCTCTGTTGATCGGGTG 108 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCG 118688 | ||||| || |||||| ||||| ||| || | || | ||||| | ||| || Sbjct 107 GAATGCCTTCTTTGTCTTGGATTTTAGCTTTTACATTCTCAATTGTGTCTGAAGCT-TCA 49 Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGC 118736 || |||| ||| | ||||| || || || ||||| || ||||| ||| Sbjct 48 ACTTCGAGGGTGATTGTTTTTCCTGTAAGGGTTTTGACGAAAATTTGC 1 >seq1135619 Length=547 Score = 104 bits (114), Expect = 2e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 ||||||| | ||||| | |||||||||| ||||| || ||||| ||||||||||||| Sbjct 143 TACCTCCTCTCAATCTAAGTACCAAGTGGAGCGTAGATTCCTTTTGGATGTTGTAATCGC 84 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | | ||||| ||| || || || |||||||| | || | | |||||||||||| | Sbjct 83 TAAGTGTGCGACCATCTTCAAGTTGCTTTCCAGCAAAAATCAATCTCTGCTGATCGGGTG 24 Query 118630 GTATGCCCTCCTTGTCT 118646 | ||||| || |||||| Sbjct 23 GAATGCCTTCTTTGTCT 7 >seq1488354 Length=939 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 118524 CTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTA 118583 |||||||| || || | ||||| ||||||||||| ||||| || |||| || | | Sbjct 152 CTCAACACTAAATGAAGGGTAGATTCTTTTTGAATATTGTAGTCACTCAATGTTCTTCCA 211 Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643 || || | ||||||||||| | || || | || || || || || || ||||| || Sbjct 212 TCTTCCAATTGTTTTCCAGCAAATATAAGCCTTTGTTGGTCTGGTGGAATACCCTCTTTA 271 Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACC 118703 || ||||||| ||| || | ||| | |||||| | || || || | || | Sbjct 272 TCCTGAATTTTTGCTTTGACATTTTCTATGGTGTCAGAAGGTTCTACTTCCAAAGTAATA 331 Query 118704 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| || || |||||||| |||||||| ||||| Sbjct 332 GTTTTACCAGTTAGAGTTTTCACAAAAATTTGCAT 366 >seq770237 Length=425 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | || |||||||| || || | || || |||||||| || ||||| || | Sbjct 282 TACCCCCTCTCAACCTCAACACTAAATGCAGAGTGGATTCTTTTTGGATATTGTAGTCAC 223 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | | ||| ||| |||||| ||||||||||| || | || | | ||||| || || | Sbjct 222 TGAGAGTACGCCCATCCTCAAGCTGTTTTCCTGCAAAAATCAACCTTTGCTGGTCTGGTG 163 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || || || ||| ||| ||| || || | ||| | || || | ||| | Sbjct 162 GGATACCTTCTTTATCTTGAATCTTTGCCTTGACATTTTCAATTGTATCTGAAGGCTCAA 103 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | || | || || || |||| |||||| ||||| |||||||| Sbjct 102 CTTCTAGTGTTATGGTCTTCCCAGTCAAAGTTTTCACAAAGATCTGCAT 54 >seq663341 Length=403 Score = 89.7 bits (98), Expect = 4e-13 Identities = 120/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 ||||| | || | || || || |||| ||| || |||||||| |||||||| || ||| Sbjct 177 CCTCCTCTCAACCGCAGAACTAAATGGAGTGTGGATTCTTTTTGGATGTTGTAGTCACTC 118 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | || || ||| || || || |||||||| | || | | |||||||||||| || Sbjct 117 AATGTACGACCATCTTCTAGTTGCTTTCCAGCAAAAATTAATCTCTGCTGATCGGGTGGA 58 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTC 118678 ||||| || |||||| ||||| ||| || | ||||| ||||| Sbjct 57 ATGCCTTCTTTGTCTTGGATTTTAGCTTTTACATTTTCGATAGTGTC 11 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425034667052752