Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq1644865 316 2e-81 >seq1644865 Length=2180 Score = 316 bits (350), Expect = 2e-81 Identities = 511/728 (70%), Gaps = 10/728 (1%) Strand=Plus/Minus Query 15943 TTTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATT 16002 |||||||||||||| |||||||| ||||||||||| ||||| ||||| | |||||||| Sbjct 782 TTTTTGATATTCACCTACTCTCTTCTCAAAGAAATTAGTTTTCCCTTCGAGGGAAATATT 723 Query 16003 TTCCATAAAATCAAAAGGATTTTTTGAACA--ATAGTATTTATCGCATCCCAATTCCAAC 16060 ||||| || || |||||||||| ||| ||||| || || |||||||| || | Sbjct 722 CTCCATGAAGTCTAAAGGATTTTC--AACTTTATAGTGCTTTTCACATCCCAACTCTATT 665 Query 16061 AATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATT 16120 || | |||||| || |||||||| || |||||||||||||| ||| |||||||| ||| Sbjct 664 AAAAGTCTATCGGCGACAAATTCAATGTACTGTTTCATTAATGTACAATTCATTCCAATT 605 Query 16121 AATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATT 16180 | ||| || | ||| |||||||| || | || ||| || ||| || || | ||| Sbjct 604 AGAGCAACGGGCAATGCATCTGTTAAGAATTCTTGTTCAATTGAAACGGCGTCTGTAATT 545 Query 16181 ATATCTCTTACTACACTATTTAACGGAGGGTT--TAATAAG-TGTTTAAACATTATACAA 16237 || || | || | | ||| ||| || ||| || || |||||||||| || Sbjct 544 ATTTCCGTGAC-AGTTTCCTTACT--AGGTTTATTAACCAGATGCTTAAACATTAAGCAC 488 Query 16238 GCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCT 16297 || ||||| ||| | ||||| |||||| ||| | ||||| ||| ||||| ||| Sbjct 487 GCGAAATCGGTATGAAGACCTTCATCCCTAGATATAAGTTCGTTACTAAAAGTAAGTCCT 428 Query 16298 GGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATA 16357 ||||| ||||||| || || | |||||| ||||| ||||| || ||| || ||||| Sbjct 427 GGCATCAGTCCTCTCTTCTTGAGCCAAAAAATAGCAGCAAAAGATCCACTGAAAAATATC 368 Query 16358 CCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttctatc 16417 |||||||| | |||||| ||||| | || || |||| | | || | | | ||| Sbjct 367 CCTTCAACAGAGGCAAACGCAACAACTCTTTCGGCGTAAGAAGCTTCTTCATTGCCAATC 308 Query 16418 cattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAAT 16477 || | |||||| | ||||| | ||| ||||| | | || || || ||||| Sbjct 307 CAACATAAAGCCCAGTCGGCTTTCTTTTTGACACATGGGAGAGTTTCGATGGCGTTAAAG 248 Query 16478 AAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCT 16537 | | |||||||||| ||| | ||||| ||||| || ||||||||||||||||| Sbjct 247 AGTTTCGTTTTTTCTTTAGGATCAGATATATAGGTATCGATCAGTAAACTATACATTTCA 188 Query 16538 GAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGT 16597 |||| || || || ||||| ||||| |||||| | || ||||| | | ||| Sbjct 187 CTGTGAACGTTTTCGATCATAATCTGGAAACCGTAAAAGAACCTTGCTTCAGGAACTTGA 128 Query 16598 ACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAA 16657 | || | | ||||| || | ||||| ||||| || |||||||| || ||||| Sbjct 127 ATCTCTTGGCAGAACCTCTCCACCAAGTTCTCGTTGACAATTCCATCCGATGCAGCAAAG 68 Query 16658 AACGCAAG 16665 || || || Sbjct 67 AATGCCAG 60 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452894317341600