Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq1643672 127 2e-24 seq1643959 102 6e-17 >seq1643672 Length=2139 Score = 127 bits (140), Expect = 2e-24 Identities = 196/277 (71%), Gaps = 2/277 (1%) Strand=Plus/Plus Query 20044 TTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTATTATGG 20103 ||||| ||| | || || || | || ||||||| ||| || ||||||||||| ||||| Sbjct 514 TTTCCATTACTTACAACCAAGAGAGTGTTTTGGAGAGGAGTGTTTGAAGAGTTACTATGG 573 Query 20104 TTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAGATTTGGAGC 20163 ||||||| |||||||||||| | | || || || ||||||||| | || ||| Sbjct 574 TTTATTAGGGGATCAACAAATGCCAAAGAACTAAGTGAGAAAGGAGTTCATATATGGGAT 633 Query 20164 GCACATGGATCTAAGCAATTTTTACACAGCAATGGATTTGACA-ACCGTCAAGAGGGGGA 20222 | | || | ||||| | | || || ||| ||| || | | || || || Sbjct 634 CAAAACTCTTCCAGAGAATTTCTTGATAGTTTAGGTTTT-ACAGACAGAGAGGAAGGAGA 692 Query 20223 TTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGACATGAA 20282 |||||||||||| ||||| ||||| ||||||||||||||||| ||||||||| ||| | Sbjct 693 TTTGGGTCCTGTATATGGGTTTCAGTGGAGACATTTTGGAGCATCATATGTTGATATGCA 752 Query 20283 CACAAATTATTTTGGACAAGGAGTAGATCAATTACAA 20319 ||| |||| ||||| | ||||| |||||| Sbjct 753 CACTGATTACAAAAACAAAGGAATTGATCAGTTACAA 789 >seq1643959 Length=2149 Score = 102 bits (112), Expect = 6e-17 Identities = 165/236 (70%), Gaps = 6/236 (3%) Strand=Plus/Minus Query 20323 GTTATTAATTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAAC 20382 || ||| || |||| || || || |||| | |||||| || | || || ||||| Sbjct 1589 GTAATTGATAAAATTCGGACAAAACCTTACGATCGGAGAATTCTTCTTTGTGCATGGAAT 1530 Query 20383 GCTAAAGATGTGCCTTTAATGGCTTTGCCTCCATGTCA---TATGCTATGCCAATTTTAC 20439 || || ||| | ||||||| | ||||||||||| |||| || || |||||| Sbjct 1529 CCTGTGGACGTGGGTAAAATGGCTCTCCCTCCATGTCACTGTATG---TGTCAGTTTTAC 1473 Query 20440 GTTGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGT 20499 || || ||| ||| | || |||||| | |||||||| || || ||| | ||||| || Sbjct 1472 GTCGCCAATGGAGAACTATCTTGTCAACTTTATCAACGTTCTGCAGATGTTGGACTTGGG 1413 Query 20500 GTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTAC 20555 || || || || ||||| |||||||| || | || | ||||| ||| |||| || Sbjct 1412 GTACCGTTTAACATTGCTAGTTATGCCTTGTTGACTCACATGATCGCAAATGTAAC 1357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391090708564420