Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq1644865 282 4e-71 >seq1644865 Length=2180 Score = 282 bits (312), Expect = 4e-71 Identities = 507/736 (69%), Gaps = 6/736 (1%) Strand=Plus/Minus Query 13901 ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCC 13960 ||||| || |||||||||||||| ||||| || |||||||| |||||||| ||||| Sbjct 793 ATAACACCACATTTTTGATATTCACCTACTCTCTTCTCAAAGAAATTAGTTTTCCCTTCG 734 Query 13961 AGTGATATATTTTCCATAAAATCAAATGGATTTGTTGACATAA-ACACTTTATCACAACC 14019 || || ||||| ||||| || || || |||||| | || | | | || ||||| || Sbjct 733 AGGGAAATATTCTCCATGAAGTCTAAAGGATTT-TCAACTTTATAGTGCTTTTCACATCC 675 Query 14020 TAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATT 14079 | |||| || | |||||| || | || ||||| || || |||||| |||||| Sbjct 674 CAACTCTATTAAAAGTCTATCGGCGACAAATTCAATGTACTGTTTCATTAATGTACAATT 615 Query 14080 CATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGC 14139 ||| || ||||| || || | | || ||||| ||||||| ||| || || || || Sbjct 614 CATTCCAATTAGAGCAACGGGCAATGCATCTGTTAAGAATTCTTGTTCAATTGAAACGGC 555 Query 14140 CTCGTTTATAATAATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAAT 14199 || | || || ||| | | |||| ||| ||| || ||||| ||||| || Sbjct 554 GTCTGTAATTATTTCCGTGACAGTTTCCTTACTAGGTTTATTAACCAGATGCTTAAACAT 495 Query 14200 TAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGT 14259 ||| ||||| ||||| |||||| || ||||| ||| ||||||||||| ||| || Sbjct 494 TAAGCACGCGAAATCGGTATGAAGACCTTCATCCCTAGATATAAGTTCGTTACTAAAAGT 435 Query 14260 TAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAA 14319 | ||||||||||| ||||| || || | |||||| || ||||| || ||||| || Sbjct 434 AAGTCCTGGCATCAGTCCTCTCTTCTTGAGCCAAAAAATAGCAGCAAAAGATCCACTGAA 375 Query 14320 GAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTT 14379 ||||| || ||||| | |||||||| | | || ||| | | || |||| || || Sbjct 374 AAATATCCCTTCAACAGAGGCAAACGCAACAACTCTTTCGGCGTAAGAAGCTTCTTCATT 315 Query 14380 CGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGC 14439 ||||| | |||||| || | ||| ||||| | | | | ||||| || || Sbjct 314 GCCAATCCAACATAAAGCCCAGTCGGCTTTCTTTTTGACACATGGGAGAGTTTCGATGGC 255 Query 14440 ATTAAATAAAT--GTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTA 14497 ||||| | | ||| || ||||||| | || || || ||||| || ||||| ||| Sbjct 254 GTTAAAGAGTTTCGTT--TTTTCTTTAGGATCAGATATATAGGTATCGATCAGTAAACTA 197 Query 14498 TACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCT 14557 ||||||||| ||| | |||||| || ||||| ||||| ||||| | || ||||| Sbjct 196 TACATTTCACTGTGAACGTTTTCGATCATAATCTGGAAACCGTAAAAGAACCTTGCTTCA 137 Query 14558 GACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTA 14617 | ||| | |||| | | || || || |||| || || || || || ||||| Sbjct 136 GGAACTTGAATCTCTTGGCAGAACCTCTCCACCAAGTTCTCGTTGACAATTCCATCCGAT 77 Query 14618 GCTGCAAAAAATGCCA 14633 || ||||| ||||||| Sbjct 76 GCAGCAAAGAATGCCA 61 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472315488538080