Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq1488354 118 8e-22 seq252373 87.8 1e-12 seq242576 86.0 5e-12 >seq1488354 Length=939 Score = 118 bits (130), Expect = 8e-22 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||||| || || | || | ||||| || |||||||||||||| |||||||| | Sbjct 140 CCTCCCCTGAGCCTCAACACTAAATGAAGGGTAGATTCTTTTTGAATATTGTAGTCACTC 199 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | |||| | | ||||||||||||||| || ||| | ||||| |||||||| || || Sbjct 200 AATGTTCTTCCATCTTCCAATTGTTTTCCAGCAAATATAAGCCTTTGTTGGTCTGGTGGA 259 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | || || ||||| ||||| |||| ||||| | | | | |||||| || || Sbjct 260 ATACCCTCTTTATCCTGAATTT-TTGCTTTGACATTTTCTATGGTGTCAGAAGGTTCTAC 318 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 ||| | || || |||| || || | ||||| ||||||||||||||| Sbjct 319 TTCCAAAGTAATAGTTTTACCAGTTAGAGTTTTCACAAAAATTTGCATT 367 Score = 82.4 bits (90), Expect = 6e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||||| | | ||| || | ||||| || ||||||||||| || || || ||| | Sbjct 824 CCTCCCCTCAACCGAAGAACAAGATGAAGCGTGGATTCTTTTTGTATATTATAATCGCTC 883 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATC 18211 | |||| ||| |||||| | |||||| || ||| | ||||| ||||||||||| Sbjct 884 AATGTTCTACCATCTTCAAGTTGTTTACCAGCAAATATAAGCCTTTGTTGATC 936 >seq252373 Length=335 Score = 87.8 bits (96), Expect = 1e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 18108 AGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTA 18167 ||||| ||||| | || | || | ||||| ||||| ||||| |||| || |||| Sbjct 38 AGTCTGAGTACTAAATGTAAAGTACACTCTTTCTGAATATTGTAATCGGACAGTGTTCGC 97 Query 18168 CAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCC 18227 | ||||||||| |||||||| ||| |||| | || ||||| || ||| | ||||| Sbjct 98 CCATCTTCCAACTGTTTGCCAGCAAAGATCAATCGCTGTTGGTCAGGGGGAATTCCTTCT 157 Query 18228 TTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTG 18287 ||||| ||||| ||| || | | ||| || |||| | ||| || | || Sbjct 158 TTATCTTGAATTTTAGCCTTTACATTTTCAATGGTATCACTTGCCTCAACCTCTAGAGTT 217 Query 18288 ATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || | || || ||||| || || || ||||||||||| Sbjct 218 ATAGTCTTCCCAGTCAAAGTCTTAACGAAAATTTGCAT 255 >seq242576 Length=334 Score = 86.0 bits (94), Expect = 5e-12 Identities = 108/147 (73%), Gaps = 1/147 (1%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||||| | | ||| || | ||||| || ||||||||||| || || || ||| | Sbjct 185 CCTCCCCTCAACCGAAGAACAAGATGAAGCGTGGATTCTTTTTGTATATTATAATCGCTC 244 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | |||| ||| |||||| | |||||| || ||| | ||||| ||||||||||| || Sbjct 245 AATGTTCTACCATCTTCAAGTTGTTTACCAGCAAATATAAGCCTTTGTTGATCTGGTGGG 304 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGC 18245 | ||||| ||||| ||||| |||| Sbjct 305 ATACCTTCTTTATCCTGAATTT-TTGC 330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 371652956405220