Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq1488354 86.0 5e-12 seq1135619 86.0 5e-12 >seq1488354 Length=939 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 ||||| || ||||| ||||| |||| || ||||| || || | || || ||| | Sbjct 366 ATGCAAATTTTTGTGAAAACTCTAACTGGTAAAACTATTACTTTGGAAGTAGAACCTTCT 307 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 |||| |||||| ||| || | ||||||| | ||||| || | || ||||| Sbjct 306 GACACCATAGAAAATGTCAAAGCAAAAATTCAGGATAAAGAGGGTATTCCACCAGACCAA 247 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 ||| | | |||| ||| || |||||| |||||||| | || ||| || |||| Sbjct 246 CAAAGGCTTATATTTGCTGGAAAACAATTGGAAGATGGAAGAACATTGAGTGACTACAAT 187 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTT 25043 || || ||||| | || |||||||||||||| Sbjct 186 ATTCAAAAAGAATCTACCCTTCATTTAGTGTT 155 >seq1135619 Length=547 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 ||||| |||||||| ||||||||||| || || || || || | || || ||| | Sbjct 143 ATGCAAATATTTGTCAAAACCTTAACTGGAAAGACCATCACTCTTGAAGTTGAACCTTCA 202 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 || | | |||| |||||||| ||||| | |||||||| | || |||||| Sbjct 203 GATACAATTGAAAATGTTAAGGCTAAAATCCAAGATAAAGAAGGAATCCCACCAGACCAG 262 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 || | || || | ||| || || ||||| |||||| || ||| || |||| | Sbjct 263 CAGAGATTGATTTTTGCTGGAAAGCAACTTGAAGATGGTCGCACACTGAGTGACTACAAC 322 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTT 25043 || || || ||| |||| ||||||||||| || Sbjct 323 ATCCAAAAGGAGTCCACTCTTCATTTAGTATT 354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409823058427520