Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq1644865 187 5e-42 >seq1644865 Length=2180 Score = 187 bits (206), Expect = 5e-42 Identities = 308/441 (70%), Gaps = 5/441 (1%) Strand=Plus/Plus Query 101916 TTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCT 101975 ||||||| ||||| | |||||||| || || || ||||| | || || | ||||| | Sbjct 343 TTGTTGCGTTTGCCTCTGTTGAAGGGATATTTTTCAGTGGATCTTTTGCTGCTATTTTTT 402 Query 101976 GGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGG 102035 || ||||||| || || | |||| || || || | || || | || ||||||| Sbjct 403 GGCTCAAGAAGAGAGGACTGATGCCAGGACTTACTTTTAGTAACGAACTTATATCTAGGG 462 Query 102036 ACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCC 102095 | |||||||||||| ||| || || ||| | |||| || | | | ||| ||| | Sbjct 463 ATGAAGGTCTTCATACCGATTTCGCGTGCTTAATGTTTAAGCA---TCTGGTTAATAAAC 519 Query 102096 C-ATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTT 102154 | | ||| |||| | ||||| | || || ||||| ||||||||||||||| Sbjct 520 CTAGTAAG-GAAACTGTCACGGAAATAATTACAGACGCCGTTTCAATTGAACAAGAATTC 578 Query 102155 CTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTAC 102214 | |||| | | |||| ||| || | |||||||| || | || |||| |||||| Sbjct 579 TTAACAGATGCATTGCCCGTTGCTCTAATTGGAATGAATTGTACATTAATGAAACAGTAC 638 Query 102215 ATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAATGTT 102274 ||||||||||| || |||| ||| || | || ||||| |||||||||||||| ||| Sbjct 639 ATTGAATTTGTCGCCGATAGACTTTTAATAGAGTTGGGATGTGAAAAGCACTATAAAGTT 698 Query 102275 ACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGAA 102334 || || || |||||||| |||||||||||||| || || || || ||||| Sbjct 699 GAAAATCCTTTAGACTTCATGGAGAATATTTCCCTCGAAGGGAAAACTAATTTCTTTGAG 758 Query 102335 AAGAGAGTCGCCGAGTATCAA 102355 |||||||| | || |||||| Sbjct 759 AAGAGAGTAGGTGAATATCAA 779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 968491698615980