Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq1644865 295 9e-75 >seq1644865 Length=2180 Score = 295 bits (326), Expect = 9e-75 Identities = 545/798 (68%), Gaps = 6/798 (1%) Strand=Plus/Minus Query 35843 TCTTCTTGAGA---CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAA 35899 ||||||| || |||||| || |||||| |||||||| || | || || || ||| Sbjct 808 TCTTCTTCGGAACTCATAACACCACATTTTTGATATTCACCTACTCTCTTCTCAAAGAAA 749 Query 35900 TTAGTTTTACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAA 35959 |||||||| ||||| | || ||||| |||||||| || || ||||| ||| ||||| Sbjct 748 TTAGTTTTCCCTTCGAGGGAAATATTCTCCATGAAGTCTAAAGGATTTTCAACTTTATAG 689 Query 35960 AtttttttAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTC 36019 |||| | ||||||| || | | |||||| ||||||||||| || || |||| Sbjct 688 TGCTTTTCACATCCCAACTCTATTAAAAGTCTATCGGCGACAAATTCAATGTACTGTTTC 629 Query 36020 ATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGT 36079 || | | |||||||||||| || || ||| || | || | || | ||||||||| Sbjct 628 ATTAATGTACAATTCATTCCAATTAGAGCAACGGGCAATGCATCTGTTAAGAATTCTTGT 569 Query 36080 TCAATAGAGACCGCGTCTGTTATAATAGATATTACTGTTTCTTCACTCGGTGGATACAAT 36139 ||||| || || |||||||| || || | || ||||| | ||| ||| || | Sbjct 568 TCAATTGAAACGGCGTCTGTAATTATTTCCGTGACAGTTTCCTTACTAGGTTTATTAACC 509 Query 36140 AAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAAT 36199 | ||| |||||||| || || ||||||||| || ||||| || || ||| || | | Sbjct 508 AGATGCTTAAACATTAAGCACGCGAAATCGGTATGAAGACCTTCATCCCTAGATATAAGT 449 Query 36200 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA 36259 ||||| ||| || ||||| ||||| || || | ||| || |||||||| || | ||| Sbjct 448 TCGTTACTAAAAGTAAGTCCTGGCATCAGTCCTCTCTTCTTGAGCCAAAAAATAGCAGCA 389 Query 36260 AATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAA 36319 || |||||| || || || ||||| || | ||||| |||| || ||| || | ||| Sbjct 388 AAAGATCCACTGAAAAATATCCCTTCAACAGAGGCAAACGCAACAACTCTTTCGGCGTAA 329 Query 36320 CCGGCACTGTCAT---GTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGC 36376 || |||| ||||| | |||||| ||||| |||||||| ||||| || Sbjct 328 GAAGCTTCTTCATTGCCAATCCAACATAAAGCCCAGTCGGCTTTCTTTTTGACACATGGG 269 Query 36377 ATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCA 36436 | || || || || |||||||| | ||||||| ||| ||| | ||| ||||| Sbjct 268 AGAGTTTCGATGGCGTTAAAGAGTTTCGTTTTTTCTTTAGGATCAGATATATAGGTATCG 209 Query 36437 ATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAA 36496 |||| | |||||||||||| |||| |||||| || || || || ||||| || Sbjct 208 ATCAGTAAACTATACATTTCACTGTGAACGTTTTCGATCATAATCTGGAAACCGTAAAAG 149 Query 36497 CATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACT 36556 | || || || | || || | ||| || || | || | || || || || || Sbjct 148 AACCTTGCTTCAGGAACTTGAATCTCTTGGCAGAACCTCTCCACCAAGTTCTCGTTGACA 89 Query 36557 ATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGT 36616 ||||| || || ||||| || |||| ||||| || |||| ||| | ||| Sbjct 88 ATTCCATCCGATGCAGCAAAGAATGCCAGAACATGGGAGATGAAATGACGTTCATCTGGC 29 Query 36617 GTTAGTTTATTCCAATCA 36634 ||||| ||||||||| Sbjct 28 TGAAGTTTGTTCCAATCA 11 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 644486458619040