Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq1643959 100 2e-16 seq902180 84.2 2e-11 >seq1643959 Length=2149 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 20989 TCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACG 21048 |||| || || || | ||||||| | |||| | ||| || || || |||||||||| Sbjct 1349 TCAGTCCAGTTACATTTGCGATCATGTGAGTCAACAAGGCATAACTAGCAATGTTAAACG 1408 Query 21049 GGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAG 21108 | ||||| || || | || || || | || || || || || || || || || | Sbjct 1409 GTACCCCAAGTCCAACATCTGCAGAACGTTGATAAAGTTGACAAGATAGTTCTCCATTGG 1468 Query 21109 CCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGG 21168 | |||||||||||||||| | |||||| |||||||||||||| | | |||| | | Sbjct 1469 CGACGTAAAACTGACACATACAGTGACATGGAGGGAGAGCCATTTTACCCACGTCCACAG 1528 Query 21169 GGTTCCACGCGCACATAACGATGCGCCGATCGT 21201 | ||||| || || | || || | |||||||| Sbjct 1529 GATTCCATGCACAAAGAAGAATTCTCCGATCGT 1561 >seq902180 Length=458 Score = 84.2 bits (92), Expect = 2e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 21003 TGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCC 21062 || || | || || ||| || || || ||||||||||| || ||||| ||||| || Sbjct 209 TGCGCCACCATATGCGTGAGCAGCGCATAGCTGGCGATATTGAACGGAACCCCCAGAAAA 150 Query 21063 ATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCACGTAAAACTGA 21122 || |||||| | |||||||||||||||||| | | ||| ||||| ||||||||| Sbjct 149 ATATCGGCGCTGCGCTGGTACAGCTGGCAGGATAATTTGCCCTCTGCCACATAAAACTGA 90 Query 21123 CACAAAACGTGACAAGGAGGGAGAGCCAT 21151 | | |||| ||||| ||| ||||| Sbjct 89 AATAGCGCGTGGCAAGGCATGAGCGCCAT 61 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419103017522880