Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq1644865 322 7e-83 >seq1644865 Length=2180 Score = 322 bits (356), Expect = 7e-83 Identities = 553/799 (69%), Gaps = 8/799 (1%) Strand=Plus/Minus Query 49645 TCTTCTTGAGA---CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAA 49701 ||||||| || |||||| || |||||| |||||||| || | || || || ||| Sbjct 808 TCTTCTTCGGAACTCATAACACCACATTTTTGATATTCACCTACTCTCTTCTCAAAGAAA 749 Query 49702 TTAGTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAA 49761 |||||||| ||||| | || ||||| |||||||| || || ||||| ||| ||||| Sbjct 748 TTAGTTTTCCCTTCGAGGGAAATATTCTCCATGAAGTCTAAAGGATTTTCAACTTTATAG 689 Query 49762 AtttttttAAATCCCAATTCAGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTC 49821 |||| | ||||||| || | | |||||| ||||||||||| || || |||| Sbjct 688 TGCTTTTCACATCCCAACTCTATTAAAAGTCTATCGGCGACAAATTCAATGTACTGTTTC 629 Query 49822 ATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGT 49881 || | | |||||||||||| || || ||| || | || | || | ||||||||| Sbjct 628 ATTAATGTACAATTCATTCCAATTAGAGCAACGGGCAATGCATCTGTTAAGAATTCTTGT 569 Query 49882 TCAATGGATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAAT 49941 ||||| || || || ||||| || || | || ||||| | ||| ||| || | Sbjct 568 TCAATTGAAACGGCGTCTGTAATTATTTCCGTGACAGTTTCCTTACTAGGTTTATTAACC 509 Query 49942 AAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGT 50001 | ||| |||||||| || || ||||||||| || ||||| || || ||| || ||| Sbjct 508 AGATGCTTAAACATTAAGCACGCGAAATCGGTATGAAGACCTTCATCCCTAGATATAAGT 449 Query 50002 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA 50061 ||||| ||| || ||||| ||||| || || | ||| || |||||||| || | ||| Sbjct 448 TCGTTACTAAAAGTAAGTCCTGGCATCAGTCCTCTCTTCTTGAGCCAAAAAATAGCAGCA 389 Query 50062 AATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAA 50121 || || ||| || || || ||||| || | |||||| ||||||| ||| || | ||| Sbjct 388 AAAGATCCACTGAAAAATATCCCTTCAACAGAGGCAAACGCAACAACTCTTTCGGCGTAA 329 Query 50122 CTGGCGCTGTCAT---GTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGC 50178 || |||| ||||| | |||||| ||||| |||||||| ||||| || Sbjct 328 GAAGCTTCTTCATTGCCAATCCAACATAAAGCCCAGTCGGCTTTCTTTTTGACACATGGG 269 Query 50179 ATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCG 50238 | ||||| ||||| |||||||| | ||||||| ||| ||| | ||| |||||| Sbjct 268 AGAGTTTCGATGGCGTTAAAGAGTTTCGTTTTTTCTTTAGGATCAGATATATAGGTATCG 209 Query 50239 ATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAA 50298 |||| | |||||||||||| |||| |||||| || ||||| || ||||| || Sbjct 208 ATCAGTAAACTATACATTTCACTGTGAACGTTTTCGATCATAATCTGGAAACCGTAAAAG 149 Query 50299 CATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACT 50358 | || || || | || || | ||| || || | || | || || || || || Sbjct 148 AACCTTGCTTCAGGAACTTGAATCTCTTGGCAGAACCTCTCCACCAAGTTCTCGTTGACA 89 Query 50359 ATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGT-TGGG 50417 ||||| || || ||||| || |||| ||||| || ||||| ||| | ||| Sbjct 88 ATTCCATCCGATGCAGCAAAGAATGCCAGAACATGGGAGATGAAATGACGTTCATCTGGC 29 Query 50418 TGTTAGTTTATTCCAATCA 50436 || ||||| ||||||||| Sbjct 28 TG-AAGTTTGTTCCAATCA 11 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 703332795351840