Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq1644865 143 4e-29 seq1643959 86.0 9e-12 >seq1644865 Length=2180 Score = 143 bits (158), Expect = 4e-29 Identities = 296/435 (68%), Gaps = 8/435 (2%) Strand=Plus/Plus Query 125130 TTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTG 125189 || || || || || |||| |||||||| | || |||||||| |||||||| || || Sbjct 45 TTCATCTCCCATGTTCTGGCATTCTTTGCTGCATCGGATGGAATTGTCAACGAGAACTTG 104 Query 125190 TTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAA 125249 || | |||| |||||| | |||| || | || ||||||||| ||||| Sbjct 105 GTGGAGAGGTTCTGCCAAGAGATTCAAGTTCCTGAAGCAAGGTTCTTTTACGGTTTCCAG 164 Query 125250 ATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGC 125309 || ||||| || ||||| ||| |||||||| | |||||| || | || || Sbjct 165 ATTATGATCGAAAACGTTCACAGTGAAATGTATAGTTTACTGATCGATACCTATATATCT 224 Query 125310 GATCCGCAACGTAAACAC-ATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAA 125368 ||||| || | ||| || | ||||||||||| ||||| || | || | | | || Sbjct 225 GATCCTAAA-GAAAAAACGAAACTCTTTAACGCCATCGAAACTCTCCCATGTGTCAAAAA 283 Query 125369 AAAGGCTCAATGGGTGATTCGGTGGATCG---ATGACGACAAGTCTTCGTACGCCGACAG 125425 || || | |||| | | ||||| | |||| || || |||| |||||||| || Sbjct 284 GAAAGCCGACTGGGCTTTATGTTGGATTGGCAATGAAGA--AG-CTTCTTACGCCGAAAG 340 Query 125426 ACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTT 125485 | | || || || ||| | || || || || || || || |||||| || || || Sbjct 341 AGTTGTTGCGTTTGCCTCTGTTGAAGGGATATTTTTCAGTGGATCTTTTGCTGCTATTTT 400 Query 125486 TTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCG 125545 ||||||||||||| | ||||| ||||| ||||| || |||||||| |||||||| | Sbjct 401 TTGGCTCAAGAAGAGAGGACTGATGCCAGGACTTACTTTTAGTAACGAACTTATATCTAG 460 Query 125546 AGACGAGGGCCTACA 125560 || || || || || Sbjct 461 GGATGAAGGTCTTCA 475 >seq1643959 Length=2149 Score = 86.0 bits (94), Expect = 9e-12 Identities = 135/191 (71%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 70224 CATGGAATCCTGCAGATTTGCACCAAATGGCACTACCACCGTGTCACTGTTTGGCTCAGT 70283 |||||||||||| || || ||||||| || || || ||||||||| || ||||| Sbjct 1537 CATGGAATCCTGTGGACGTGGGTAAAATGGCTCTCCCTCCATGTCACTGTATGTGTCAGT 1478 Query 70284 TTTAC-TCGTACGATGGCAAATTGTCATGCTTAATGTATCAGAGGAGTGCCGACATGGGC 70342 ||||| ||| | |||| || | || || | | ||||| | ||| || | || Sbjct 1477 TTTACGTCGC-CAATGGAGAACTATCTTGTCAACTTTATCAACGTTCTGCAGATGTTGGA 1419 Query 70343 CTCGGTGTACCCTTTAACATTGCAAGCTATTCTATGTTGACGCACATGATTGCTCACATT 70402 || || ||||| ||||||||||| || ||| | ||||||| |||||||| || | | Sbjct 1418 CTTGGGGTACCGTTTAACATTGCTAGTTATGCCTTGTTGACTCACATGATCGCAAATGTA 1359 Query 70403 ACCGGCCTGAA 70413 || || ||||| Sbjct 1358 ACTGGACTGAA 1348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 725649281518560