Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_004681.1 Length=75931 Score E Sequences producing significant alignments: (Bits) Value seq1298526 145 4e-30 seq209495 116 2e-21 seq188443 104 1e-17 >seq1298526 Length=653 Score = 145 bits (160), Expect = 4e-30 Identities = 272/397 (69%), Gaps = 2/397 (1%) Strand=Plus/Minus Query 66686 ATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGC 66745 ||| ||||||| ||| | | |||||| ||| ||||| || || || | || | ||| Sbjct 396 ATTTCCACCGGTTCTCTGGGGCTGGACATCGCGCTGGGTATTGGCGGCTTGCCCAAAGGC 337 Query 66746 CGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCG 66805 || | | ||||||||||| || ||||| || || || | || || || ||||| Sbjct 336 CGAATCATCGAAATCTACGGGCCTGAATCCTCGGGTAAAACCACACTCACGCTACACGCC 277 Query 66806 GTGGCC-AATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCT 66864 || ||| ||||| ||||| | || |||| ||| || | | || || |||||| | || Sbjct 276 GTTGCCGAATGC-CAGAAAACTGGCGGCACCGCAGCATTTGTTGATGCCGAGCACGCGCT 218 Query 66865 GGACCCCGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCC 66924 ||| |||| || || || || || ||||| || || | || | || |||||| Sbjct 217 GGATCCCGTCTATGCGAAAAAACTTGGCGTGGATGTCAACGAGCTTCTCGTTTCTCAGCC 158 Query 66925 GGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTC 66984 || | |||||| || || ||||| ||| ||| | ||||| ||||||| | || Sbjct 157 CGATAATGGCGAACAAGCGCTGGAAATCACCGACATGCTCGTGCGCTCTGGCGCGGTGGA 98 Query 66985 CATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACAT 67044 ||||| ||||||||||| ||||| || || || ||||| || |||||||||| || Sbjct 97 TATCGTTGTCGTTGACTCCGTGGCTGCGCTCACCCCCCGCGCTGAAATCGAAGGCGATAT 38 Query 67045 CGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATG 67081 || ||| ||| | ||| | || || || || ||| Sbjct 37 GGGCGACTCGCACATGGGCTTACAAGCACGGCTAATG 1 >seq209495 Length=329 Score = 116 bits (128), Expect = 2e-21 Identities = 217/316 (69%), Gaps = 2/316 (1%) Strand=Plus/Minus Query 66686 ATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGC 66745 ||| ||||||| ||| | | |||||| ||| ||||| || || || | || | ||| Sbjct 315 ATTTCCACCGGTTCTCTGGGGCTGGACATCGCGCTGGGTATTGGCGGCTTGCCCAAAGGC 256 Query 66746 CGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCG 66805 || | | ||||||||||| || ||||| || || || | || || || ||||| Sbjct 255 CGAATCATCGAAATCTACGGGCCTGAATCCTCGGGTAAAACCACACTCACGCTACACGCC 196 Query 66806 GTGGCC-AATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCT 66864 || ||| ||||| ||||| | || |||| ||| || | | || || |||||| | || Sbjct 195 GTTGCCGAATGC-CAGAAAACTGGCGGCACCGCAGCGTTTGTTGATGCCGAGCACGCGCT 137 Query 66865 GGACCCCGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCC 66924 ||| |||| || || || ||||| ||||| || || | || | || |||||| Sbjct 136 GGATCCCGTCTATGCGAAAAAACTCGGCGTGGATGTCAACGAACTTCTCGTTTCTCAGCC 77 Query 66925 GGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTC 66984 || | |||||| || || ||||| ||| ||| | ||||| ||||||| | || Sbjct 76 CGATAATGGCGAACAAGCGCTGGAAATCACCGACATGCTCGTTCGCTCTGGCGCGGTGGA 17 Query 66985 CATCGTCGTCGTTGAC 67000 ||||| ||||||||| Sbjct 16 TATCGTTGTCGTTGAC 1 >seq188443 Length=326 Score = 104 bits (114), Expect = 1e-17 Identities = 205/303 (68%), Gaps = 3/303 (1%) Strand=Plus/Minus Query 67143 TCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACGG 67202 |||||||| | ||| ||||||||| ||| | ||| || || |||||||| | Sbjct 325 TCAACCAGATCCGCATGAAGATCGGG---GTGATGTTCGGTTCGCCGGAAACCACCACCG 269 Query 67203 GCGGAAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCG 67262 | || || || ||| ||||||| |||| || || ||||| | || ||||||| | | | Sbjct 268 GTGGTAACGCGCTGAAGTTCTACTCCTCCGTGCGGCTGGATATTCGCCGCATCGGCGCGG 209 Query 67263 AGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAAGTCGTCAAGAACAAGC 67322 ||| | |||| |||| | || || |||||||| || |||||||||||||| Sbjct 208 TCAAGAAGGGCGCCGAGGTGATTGGGAATGAAACCCGGGTCAAGATCGTCAAGAACAAGA 149 Query 67323 TGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTG 67382 |||| |||||| | | ||||||||| | | ||||| ||||| || || | Sbjct 148 TGGCGCCGCCGTTCAAGCAGGCCGAGTTCGAAATTCTCTACGGTGAGGGGATTTCCTGGC 89 Query 67383 AGGTCGAACTCCTCGACCTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGT 67442 || || || | || |||| |||| ||| ||||| |||| || ||| |||||| Sbjct 88 TGGGTGAGCTGATTGATCTGGGCGTGCAGCACAATCTGGTCGAGAAATCCGGCTCCTGGT 29 Query 67443 TCA 67445 || Sbjct 28 ACA 26 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 237930626913872