Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ligia_20exotica_20[genbank_20GCA_5F002091915.1_202017-03-31] 1,663,556 sequences; 953,555,114 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq1488354 127 2e-24 seq678478 104 2e-17 seq1135619 100 2e-16 seq663341 89.7 4e-13 seq242576 89.7 4e-13 seq770237 86.0 5e-12 >seq1488354 Length=939 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 ||||| | | ||||||||| ||||| || |||||||||||||| || ||||| || | | Sbjct 140 CCTCCCCTGAGCCTCAACACTAAATGAAGGGTAGATTCTTTTTGAATATTGTAGTCACTC 199 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| | ||||||||||||||| || ||| | |||||||| ||||| || || Sbjct 200 AATGTTCTTCCATCTTCCAATTGTTTTCCAGCAAATATAAGCCTTTGTTGGTCTGGTGGA 259 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | || ||||| || ||||||| ||| || | | | | || |||||| | Sbjct 260 ATACCCTCTTTATCCTGAATTTTTGCTTTGACATTTTCTATGGTGTCAGAAGGTTCTACT 319 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 |||| ||||| ||||| || || | ||||| ||||||||||||||| Sbjct 320 TCCAAAGTAATAGTTTTACCAGTTAGAGTTTTCACAAAAATTTGCATT 367 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 19980 ttCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039 ||||||||| ||| || | || | ||||| |||||| || || || || |||||||| | Sbjct 594 TTCCTCCTCTTAATCTAAGAACAAGATGTAATGTAGACTCCTTCTGAATATTGTAATCAC 653 Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099 | ||| | ||||||||| ||||| || ||| | |||||||| ||||| || | Sbjct 654 TTAATGTTCTCCCATCTTCCAACTGTTTCCCTGCAAAGATAAGCCTTTGTTGGTCCGGTG 713 Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159 | | |||||||| || ||||||| || || | ||| || || || ||| Sbjct 714 GGATACCTTCTTTATCCTGAATTTTTGCCTTAACATTTTCAATAGTGTCTGAAGATTCTA 773 Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 ||||| || ||||| || || || || ||||||||||| || ||||| Sbjct 774 CTTCCAAAGTTATGGTCTTTCCAGTTAAAGTTTTGACAAAGATCTGCAT 822 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 19980 ttCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039 |||| |||| ||| | | ||| | ||||| ||| ||||| ||||| || || ||||| | Sbjct 366 TTCCACCTCTTAAACGAAGCACAAGATGTAATGTGGATTCCTTTTGAATATTATAATCAC 425 Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099 | ||| | |||||| | |||||| || ||| |||| | |||||||| || | Sbjct 426 TAAGCGTTCTGCCATCTTCTAGTTGTTTTCCAGCAAAAATTAATCTCTGTTGGTCTGGTG 485 Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159 | | || ||||| || ||||||| |||||| | ||| | || ||| || Sbjct 486 GAATACCCTCTTTATCCTGAATTTTTGCTTTCACATTTTCAATTGTGTCTGAAGGCTCTA 545 Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 ||||| ||| || ||||| || || || || || ||||||||||||||| Sbjct 546 CTTCCAAGGTGATAGTTTTTCCCGTTAAGGTCTTCACAAAAATTTGCATT 595 Score = 82.4 bits (90), Expect = 6e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 ||||| | |||| | || | ||| || || |||||||||||||| || ||||||| | Sbjct 824 CCTCCCCTCAACCGAAGAACAAGATGAAGCGTGGATTCTTTTTGTATATTATAATCGCTC 883 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATC 20094 | ||| || |||||| | |||||| || ||| | |||||||| |||||||| Sbjct 884 AATGTTCTACCATCTTCAAGTTGTTTACCAGCAAATATAAGCCTTTGTTGATC 936 >seq678478 Length=406 Score = 104 bits (114), Expect = 2e-17 Identities = 158/225 (70%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 ||||||| |||| || || ||||| ||||| || |||||||| |||||||| || | | Sbjct 225 CCTCCTCTCAACCGCAGAACTAAATGGAGTGTGGACTCTTTTTGGATGTTGTAGTCACTC 166 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | || | |||||| | ||| || || ||| |||| | |||||||||||| || Sbjct 165 AATGTACGACCATCTTCTAGTTGCTTTCCAGCAAAAATCAATCTCTGTTGATCGGGTGGA 106 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | |||||||||||| ||||| ||| || | ||| | || || ||| | Sbjct 105 ATGCCTTCTTTGTCTTGGATTTTAGCTTTTACATTCTCAATTGTGTCTGAAGCTTCAACT 46 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGC 20206 || | ||| || ||||| || || | |||||||| ||||||||| Sbjct 45 TCGAGGGTGATTGTTTTTCCTGTAAGGGTTTTGACGAAAATTTGC 1 >seq1135619 Length=547 Score = 100 bits (110), Expect = 2e-16 Identities = 194/287 (68%), Gaps = 11/287 (4%) Strand=Plus/Minus Query 19933 tttaatttaataaattttattataaaat----------ttaaatatatttt-atcatttt 19981 |||||||| ||||| || | || ||||| ||||| | || || || | ||| Sbjct 429 TTTAATTTTATAAAATTAAATAAAAAATAGAAAGTACATTAAAAAAATATTCATTAATTT 370 Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 ||||||| | |||||| || ||||| || || || || ||||| |||||||| || | | Sbjct 369 CCTCCTCTCAGCCTCAATACTAAATGAAGAGTGGACTCCTTTTGGATGTTGTAGTCACTC 310 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | || | |||||| | ||| || || ||| |||| | ||||| || || || Sbjct 309 AGTGTGCGACCATCTTCAAGTTGCTTTCCAGCAAAAATCAATCTCTGCTGGTCTGGTGGG 250 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | |||||||| || ||||| || || | ||| | ||| |||||| | Sbjct 249 ATTCCTTCTTTATCTTGGATTTTAGCCTTAACATTTTCAATTGTATCTGAAGGTTCAACT 190 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || | || ||||| || || || || ||||||||||| |||||||| Sbjct 189 TCAAGAGTGATGGTCTTTCCAGTTAAGGTTTTGACAAATATTTGCAT 143 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 ||||||| || || | ||||| || || |||||||| ||||| ||||||||||||| Sbjct 141 CCTCCTCTCAATCTAAGTACCAAGTGGAGCGTAGATTCCTTTTGGATGTTGTAATCGCTA 82 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | || | |||||| | ||| || || ||| |||| | ||||| |||||| || Sbjct 81 AGTGTGCGACCATCTTCAAGTTGCTTTCCAGCAAAAATCAATCTCTGCTGATCGGGTGGA 22 Query 20102 ACGCCTTCTTTGTC 20115 | |||||||||||| Sbjct 21 ATGCCTTCTTTGTC 8 >seq663341 Length=403 Score = 89.7 bits (98), Expect = 4e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 ||||||| |||| || || ||||| ||||| ||||||||||| |||||||| || | | Sbjct 177 CCTCCTCTCAACCGCAGAACTAAATGGAGTGTGGATTCTTTTTGGATGTTGTAGTCACTC 118 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | || | |||||| | ||| || || ||| |||| | ||||| |||||| || Sbjct 117 AATGTACGACCATCTTCTAGTTGCTTTCCAGCAAAAATTAATCTCTGCTGATCGGGTGGA 58 Query 20102 ACGCCTTCTTTGTC 20115 | |||||||||||| Sbjct 57 ATGCCTTCTTTGTC 44 >seq242576 Length=334 Score = 89.7 bits (98), Expect = 4e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 ||||| | |||| | || | ||| || || |||||||||||||| || ||||||| | Sbjct 185 CCTCCCCTCAACCGAAGAACAAGATGAAGCGTGGATTCTTTTTGTATATTATAATCGCTC 244 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| || |||||| | |||||| || ||| | |||||||| |||||||| || Sbjct 245 AATGTTCTACCATCTTCAAGTTGTTTACCAGCAAATATAAGCCTTTGTTGATCTGGTGGG 304 Query 20102 ACGCCTTCTTTGTCGGCAATTTTT 20125 | |||||||| || ||||||| Sbjct 305 ATACCTTCTTTATCCTGAATTTTT 328 >seq770237 Length=425 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| ||||||||||| ||||| || || ||||||||||| || ||||| || | Sbjct 280 CCCCCTCTCAACCTCAACACTAAATGCAGAGTGGATTCTTTTTGGATATTGTAGTCACTG 221 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| ||| || | ||||| || ||| |||| | ||| || || || || Sbjct 220 AGAGTACGCCCATCCTCAAGCTGTTTTCCTGCAAAAATCAACCTTTGCTGGTCTGGTGGG 161 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | |||||||| || ||| ||| || || | ||| | ||| ||| || | Sbjct 160 ATACCTTCTTTATCTTGAATCTTTGCCTTGACATTTTCAATTGTATCTGAAGGCTCAACT 101 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTT 20211 || | || ||||| || || ||||| ||||| ||||| || |||||||| Sbjct 100 TCTAGTGTTATGGTCTTCCCAGTCAAAGTTTTCACAAAGATCTGCATTTT 51 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 411080242075236